New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4587878NA (NA)9 (0.080) 6/162 NT NA noncoding (7/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4587891 NA (NA)noncoding (20/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 180 total aligned reads displayed.

GGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCA  >  NC_000913/4587779‑4587976
                                                                                                   |                                                                                                  
  tGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGc                                                                                                  >  2:2673528/1‑100 (MQ=255)
   gCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCg                                                                                                 >  2:1856171/1‑100 (MQ=255)
   gCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCg                                                                                                 >  2:2222050/1‑100 (MQ=255)
    cACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCgg                                                                                                <  1:356313/100‑1 (MQ=255)
     aCTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGc                                                                                               >  1:2779324/1‑100 (MQ=255)
      cTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCt                                                                                              >  1:39884/1‑100 (MQ=255)
           tGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGcc                                                                                         >  1:114920/1‑100 (MQ=255)
           tGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGcc                                                                                         >  1:3074927/1‑100 (MQ=255)
           tGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGcc                                                                                         <  2:2034054/100‑1 (MQ=255)
           tGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGcc                                                                                         <  2:771935/100‑1 (MQ=255)
            gATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCt                                                                                        <  1:792603/100‑1 (MQ=255)
            gATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCt                                                                                        <  2:361275/100‑1 (MQ=255)
             aTCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCtt                                                                                       <  2:2779340/100‑1 (MQ=255)
              tCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTa                                                                                      >  2:1163153‑M2/1‑99 (MQ=255)
               cGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTat                                                                                     <  1:623831‑M2/100‑3 (MQ=255)
                gAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                    <  2:3318046‑M2/100‑4 (MQ=255)
                 aaaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatcc                                                                                   <  1:1531809‑M2/100‑5 (MQ=255)
                  aaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccg                                                                                  <  2:565804‑M2/100‑6 (MQ=255)
                  aaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccg                                                                                  <  1:861192‑M2/100‑6 (MQ=255)
                  aaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccg                                                                                  <  2:565803‑M2/100‑6 (MQ=255)
                   aaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccgg                                                                                 <  1:41135‑M1/100‑20 (MQ=255)
                   aaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccgg                                                                                 <  2:1401677‑M2/100‑7 (MQ=255)
                    aCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccggc                                                                                <  2:2792353‑M1/100‑21 (MQ=255)
                     cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccggcc                                                                               <  2:1609908‑M1/100‑22 (MQ=255)
                     cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcc                                                                               >  2:405626‑M2/1‑92 (MQ=255)
                      gAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAAGTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccggcct                                                                              <  1:28413‑M1/100‑23 (MQ=255)
                      gAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGccc                                                                              <  2:294804/100‑1 (MQ=255)
                      gAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGccc                                                                              <  2:2273553/100‑1 (MQ=255)
                       aaGTAGGGGTGTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccggcctg                                                                             <  1:2425233‑M1/100‑24 (MQ=255)
                         gTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATa                                                                           >  2:3521856/1‑100 (MQ=255)
                          tAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATaa                                                                          <  1:3189907/100‑1 (MQ=255)
                          tAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATaa                                                                          >  2:559518/1‑100 (MQ=255)
                           aGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAc                                                                         >  1:1508032/1‑100 (MQ=255)
                            ggggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcc                                                                        <  1:1903280/100‑1 (MQ=255)
                             gggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAccc                                                                       >  2:2864030/1‑100 (MQ=255)
                                tttCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCtt                                                                    <  1:3164706/100‑1 (MQ=255)
                                gatcttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCtt                                                                    <  1:250972/98‑1 (MQ=255)
                                   cttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                 <  1:2363363/100‑1 (MQ=255)
                                   cttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                 >  2:552316/1‑100 (MQ=255)
                                    ttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAccccagatcg                                                                >  1:2881802/1‑94 (MQ=255)
                                      cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                              <  1:2256569/100‑1 (MQ=255)
                                      cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                              <  1:1966140/100‑1 (MQ=255)
                                      cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                              >  1:1535112/1‑100 (MQ=255)
                                       aCGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCt                                                             >  2:1125826/1‑100 (MQ=255)
                                       aCGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCt                                                             <  1:606212/100‑1 (MQ=255)
                                            tgttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAcc                                                        >  2:374404/1‑100 (MQ=255)
                                                 aaGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCa                                                   <  2:515033/100‑1 (MQ=255)
                                                     tGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACg                                               <  2:3250523/100‑1 (MQ=255)
                                                      gCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                              >  2:542583/1‑100 (MQ=255)
                                                       ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                              >  2:3620517/1‑99 (MQ=255)
                                                       ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCa                                             >  2:417104/1‑100 (MQ=255)
                                                       ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCa                                             >  2:1396389/1‑100 (MQ=255)
                                                        cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                            >  2:1338926/1‑100 (MQ=255)
                                                        cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                            >  2:1634868/1‑100 (MQ=255)
                                                          aaaCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGATGCGCCGTATCAGGACCATAGCCCCTTGCTTCCTCAACCCCGCacccgc                                              >  1:3320282/1‑91 (MQ=255)
                                                               ggATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAGCCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAt                                     >  1:3363038/1‑100 (MQ=255)
                                                               ggATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAt                                     <  2:2451720/100‑1 (MQ=255)
                                                                gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                    <  1:2121765/100‑1 (MQ=255)
                                                                gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                    <  2:846427/100‑1 (MQ=255)
                                                                 atatGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtct                                   >  2:648108/1‑100 (MQ=255)
                                                                  tatGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtctc                                  >  2:2884215/1‑100 (MQ=255)
                                                                    tGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCtt                                <  2:895670/100‑1 (MQ=255)
                                                                    tGGACTATTTTGAGTGAAATATCAGGCCGGATGCGACTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCtt                                <  2:3284937/100‑1 (MQ=255)
                                                                     ggACTATTTTGAGTTAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtc                               <  2:2531606/100‑1 (MQ=255)
                                                                      gACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcc                              >  2:2870481/1‑100 (MQ=255)
                                                                      gACTATCTTGAGTGAAATATAAAGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTGACTTCCTCAACGCCGCAGACGCAGCACGAATCTCTtc                               >  1:1276491/1‑99 (MQ=255)
                                                                       aCTATTTTGAGTTAAATCTCATGTAGGTTGCGACTGCTCTTTATCCGCCCCATAACCACTTACTTCCGCAACCCCGCAAACGCAGCCCGAATCTCtt                                <  1:118320/97‑1 (MQ=255)
                                                                        cTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcctc                            >  1:2005800/1‑100 (MQ=255)
                                                                          aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCg                          <  1:1634860/100‑1 (MQ=255)
                                                                             ttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCa                       <  1:3284073/100‑1 (MQ=255)
                                                                             ttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCa                       >  1:177904/1‑100 (MQ=255)
                                                                               gAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGc                     >  1:2710674/1‑100 (MQ=255)
                                                                                aGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCt                    >  2:2318306/1‑100 (MQ=255)
                                                                                 gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                   >  1:468617/1‑100 (MQ=255)
                                                                                 gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                   >  2:2437675/1‑100 (MQ=255)
                                                                                 gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                   >  2:448489/1‑100 (MQ=255)
                                                                                   gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                 >  1:2655015/1‑100 (MQ=255)
                                                                                   gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                 >  2:280799/1‑100 (MQ=255)
                                                                                    aaaTATCAGGCCGGATGCGGCTGCGCCTTTTCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAATCGCAGCCCGAATCTCTTCCTCCGGCAGCTGGAt                <  1:2222037/100‑1 (MQ=255)
                                                                                    aaaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGAt                <  1:3285183/100‑1 (MQ=255)
                                                                                       tatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc             <  1:2927516/100‑1 (MQ=255)
                                                                                       tatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc             <  2:100852/100‑1 (MQ=255)
                                                                                       tatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc             >  2:2019016/1‑100 (MQ=255)
                                                                                        atCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctac            <  2:594420‑M2/100‑76 (MQ=255)
                                                                                          cAGTCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt          <  2:2153024/100‑1 (MQ=255)
                                                                                           aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc         <  1:686400‑M2/100‑79 (MQ=255)
                                                                                           aGGCCGGATGCGGCTGCGCCTTATCCGGCGCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa         <  2:1039614/100‑1 (MQ=255)
                                                                                           aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa         >  2:1463796/1‑100 (MQ=255)
                                                                                             gCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggccccttcaacaaacgtgaagaaacccctacttcg        <  1:2955622‑M2/99‑80 (MQ=255)
                                                                                             gCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATaaa       >  2:310610/1‑100 (MQ=255)
                                                                                              ccGGATaaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgtt      >  2:3699460‑M1/1‑6 (MQ=255)
                                                                                              ccGGATaaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgtt      >  2:2845708‑M1/1‑6 (MQ=255)
                                                                                              ccGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgtt      <  1:41135‑M2/100‑82 (MQ=255)
                                                                                              ccGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgt       <  2:3557725‑M2/99‑81 (MQ=255)
                                                                                              ccGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAac      <  2:315509/100‑1 (MQ=255)
                                                                                               cGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAaca     <  2:1123111/100‑1 (MQ=255)
                                                                                                ggATaaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgtttt    <  2:469707‑M1/100‑97 (MQ=255)
                                                                                                ggATaaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgtttt    <  2:3698316‑M1/100‑97 (MQ=255)
                                                                                                ggATGCGGCTGCGCCTTATCCGGCCCATAAACCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCCGCTGGATCCCGATAAacac    >  1:823751/1‑100 (MQ=255)
                                                                                                  aTaaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgttttcg  <  1:1632194‑M1/100‑99 (MQ=255)
                                                                                                   |                                                                                                  
GGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCA  >  NC_000913/4587779‑4587976

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.