New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4587878NA (NA)9 (0.080) 6/162 NT NA noncoding (7/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4587891 NA (NA)noncoding (20/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 151 total aligned reads displayed.

ATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCG  >  NC_000913/4587792‑4587988
                                                                                                   |                                                                                                 
aTCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCtt                                                                                                   <  2:2779340/100‑1 (MQ=255)
 tCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTa                                                                                                  >  2:1163153‑M2/1‑99 (MQ=255)
  cGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTat                                                                                                 <  1:1632194‑M2/100‑3 (MQ=255)
   gAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                                <  2:3318046‑M2/100‑4 (MQ=255)
    aaaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatcc                                                                                               <  1:1531809‑M2/100‑5 (MQ=255)
     aaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccg                                                                                              <  1:861192‑M2/100‑6 (MQ=255)
     aaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccg                                                                                              <  2:565804‑M2/100‑6 (MQ=255)
      aaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccgg                                                                                             >  2:3699460‑M2/1‑94 (MQ=255)
        cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcc                                                                                           >  2:405626‑M2/1‑92 (MQ=255)
         gAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGccc                                                                                          <  2:2273553/100‑1 (MQ=255)
            gTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATa                                                                                       >  2:3521856/1‑100 (MQ=255)
            gTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAAATGGATATGGACTATTTTGAGTGAAATATCAGTCCGGATGCGGCTGCGCCTTATCCGGCCCAt                                                                                        >  1:1419234/1‑99 (MQ=255)
             tAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATaa                                                                                      <  1:3189907/100‑1 (MQ=255)
             tAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATaa                                                                                      >  2:559518/1‑100 (MQ=255)
               ggggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcc                                                                                    <  1:1903280/100‑1 (MQ=255)
                gggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAccc                                                                                   >  2:2864030/1‑100 (MQ=255)
                   tttCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCtt                                                                                <  1:3164706/100‑1 (MQ=255)
                   tttCTTCACGTTTGTGGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCtt                                                                                <  1:2351804/100‑1 (MQ=255)
                   tttCTTCACGTTTGTGGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCtt                                                                                <  2:3651270/100‑1 (MQ=255)
                   gatcttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCtt                                                                                <  1:250972/98‑1 (MQ=255)
                      cttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                             <  1:2363363/100‑1 (MQ=255)
                       ttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAccccagatcg                                                                            >  1:2881802/1‑94 (MQ=255)
                        tcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTagatc                                                                           >  2:250972/1‑96 (MQ=255)
                         cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                                          <  1:1966140/100‑1 (MQ=255)
                         cACGTTTGTTGAAGGTGCCGAAACTGGATATGAACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                                          <  1:1963961/100‑1 (MQ=255)
                          aCGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCt                                                                         <  1:606212/100‑1 (MQ=255)
                           cGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTc                                                                        <  1:2699465/100‑1 (MQ=255)
                               tgttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAcc                                                                    <  1:300170/100‑1 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                   <  1:178441/100‑1 (MQ=255)
                                   gAAGGTGCCGAAACTGGATATGAACTATTTTGAGAGAAATATCAGGCCGGATGCGGCGGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGc                                                                >  1:2153011/1‑100 (MQ=255)
                                    aaGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCa                                                               <  2:515033/100‑1 (MQ=255)
                                      ggTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCaaa                                                             <  1:3643983/100‑1 (MQ=255)
                                       gTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAAc                                                            <  2:2822593/100‑1 (MQ=255)
                                        tGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACg                                                           <  2:3250523/100‑1 (MQ=255)
                                         gCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                                          >  1:2747077/1‑100 (MQ=255)
                                         gCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                                          >  2:542583/1‑100 (MQ=255)
                                          ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                                          >  2:3620517/1‑99 (MQ=255)
                                          ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCa                                                         >  2:1396389/1‑100 (MQ=255)
                                          ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCa                                                         >  1:878387/1‑100 (MQ=255)
                                          ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCa                                                         >  2:417104/1‑100 (MQ=255)
                                           cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                                        >  2:46042/1‑100 (MQ=255)
                                           cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                                        >  2:1634868/1‑100 (MQ=255)
                                           cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTAAACCCCGCAAACGCAg                                                        >  2:2262778/1‑100 (MQ=255)
                                             aaaCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGATGCGCCGTATCAGGACCATAGCCCCTTGCTTCCTCAACCCCGCacccgc                                                          >  1:3320282/1‑91 (MQ=255)
                                                  ggATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAGCCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAt                                                 >  1:3363038/1‑100 (MQ=255)
                                                  ggATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAt                                                 <  2:2451720/100‑1 (MQ=255)
                                                   gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                                >  2:1029723/1‑100 (MQ=255)
                                                   gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                                <  1:2121765/100‑1 (MQ=255)
                                                   gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                                <  2:846427/100‑1 (MQ=255)
                                                     tatGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtctc                                              >  2:2884215/1‑100 (MQ=255)
                                                       tGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCtt                                            <  2:895670/100‑1 (MQ=255)
                                                       tGGACTATTTTGAGTGAAATATCAGGCCGGATGCGACTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCtt                                            <  2:3284937/100‑1 (MQ=255)
                                                         gACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcc                                          >  2:2870481/1‑100 (MQ=255)
                                                          aCTATTTTGAGTTAAATCTCATGTAGGTTGCGACTGCTCTTTATCCGCCCCATAACCACTTACTTCCGCAACCCCGCAAACGCAGCCCGAATCTCtt                                            <  1:118320/97‑1 (MQ=255)
                                                           cTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcctc                                        >  2:809679/1‑100 (MQ=255)
                                                             aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCg                                      <  1:1634860/100‑1 (MQ=255)
                                                               tttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGc                                    >  1:1531820/1‑100 (MQ=255)
                                                                ttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCa                                   <  1:3284073/100‑1 (MQ=255)
                                                                   aGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCt                                >  2:2318306/1‑100 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                               >  2:2437675/1‑100 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                               >  2:448489/1‑100 (MQ=255)
                                                                      gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                             >  1:2655015/1‑100 (MQ=255)
                                                                       aaaTATCAGGCCGGATGCGGCTGCGCCTTTTCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAATCGCAGCCCGAATCTCTTCCTCCGGCAGCTGGAt                            <  1:2222037/100‑1 (MQ=255)
                                                                       aaaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGAt                            <  1:3285183/100‑1 (MQ=255)
                                                                        aaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATc                           >  2:2729479/1‑100 (MQ=255)
                                                                          tatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc                         <  2:3143673/100‑1 (MQ=255)
                                                                           atCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctac                        <  2:594420‑M2/100‑76 (MQ=255)
                                                                           atCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCg                        <  1:790481/100‑1 (MQ=255)
                                                                           atCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCACGAATCTCTTCCTCCGGCAGCTGGATCCCg                        >  1:2245060/1‑100 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa                       <  1:542580/100‑1 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa                       <  2:2061442/100‑1 (MQ=255)
                                                                             cAGTCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt                      <  2:2153024/100‑1 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt                      <  2:2655030/100‑1 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt                      <  2:558194/100‑1 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc                     <  1:686400‑M2/100‑79 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccactttcggcaccttcaacaaacgtgaagaaacccctacttc                     <  1:28413‑M2/100‑79 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTATCCGGCGCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                     <  2:1039614/100‑1 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                     >  2:1463796/1‑100 (MQ=255)
                                                                               ggCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcg                    <  2:1609908‑M2/100‑80 (MQ=255)
                                                                                gCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggccccttcaacaaacgtgaagaaacccctacttcg                    <  1:2955622‑M2/99‑80 (MQ=255)
                                                                                gCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgt                   <  2:2792353‑M2/100‑81 (MQ=255)
                                                                                gCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATaaa                   >  2:310610/1‑100 (MQ=255)
                                                                                gCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATaaa                   >  1:1260422/1‑100 (MQ=255)
                                                                                 ccGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgtt                  <  1:41135‑M2/100‑82 (MQ=255)
                                                                                 ccGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgt                   <  2:3557725‑M2/99‑81 (MQ=255)
                                                                                 ccGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAac                  <  1:2916268/100‑1 (MQ=255)
                                                                                  cGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAaca                 <  2:2891612/100‑1 (MQ=255)
                                                                                  cGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAaca                 <  2:1123111/100‑1 (MQ=255)
                                                                                   ggATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAacac                >  2:1232363/1‑100 (MQ=255)
                                                                                     aggCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATGAACACCa              <  2:1940715/98‑1 (MQ=255)
                                                                                        cGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCg           >  1:3236597/1‑100 (MQ=255)
                                                                                        cGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCg           >  1:2590804/1‑100 (MQ=255)
                                                                                        cGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCg           >  2:3246780/1‑100 (MQ=255)
                                                                                           cTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGc        <  2:2831546/100‑1 (MQ=255)
                                                                                           cTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGc        <  1:1463790/100‑1 (MQ=255)
                                                                                             gcgcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCGGGATCCCGATAAACACCATCGTGCt       >  2:1551387/1‑99 (MQ=255)
                                                                                              cgcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTAt     >  1:2962755/1‑100 (MQ=255)
                                                                                                ccTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGc   >  2:1116132/1‑100 (MQ=255)
                                                                                                 cTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCg  >  2:3704979/1‑100 (MQ=255)
                                                                                                 cTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCg  >  2:2002090/1‑100 (MQ=255)
                                                                                                   |                                                                                                 
ATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCG  >  NC_000913/4587792‑4587988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.