New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4623771 =162 (1.230)16 (0.130) 8/164 NT 9.9% coding (347/1017 nt) lplA lipoate‑protein ligase A
?NC_000913 4623797 = 141 (1.160)coding (321/1017 nt) lplA lipoate‑protein ligase A
Rejected: Frequency below cutoff threshold.

Only 100 of 199 total aligned reads displayed.

TGGAAGCCGCGATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGC  >  NC_000913/4623672‑4623870
                                                                                                   |                                                                                                   
tggAAGCCGCGATCTTTGGTTTAACGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCTACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCgg                                                                                                     >  1:3082519/1‑100 (MQ=255)
  gAAGCCGCGATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGgcg                                                                                                   <  2:3177724/100‑1 (MQ=255)
  cggcgcggtgttccacgatctcggcaatacctgctttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaatgcg                                                                                                   <  2:2350832‑M1/3‑1 (MQ=255)
   aaGCCGCGATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGgcgc                                                                                                  >  1:120800/1‑100 (MQ=255)
     gCCGCGATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTCTCACCCCCAGATCGTTACGTCCGGACGCTTCGgcgc                                                                                                  <  1:2974694/98‑1 (MQ=255)
      ccGCGATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGa                                                                                               >  2:1302815/1‑100 (MQ=255)
      ccGCGATCTCTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGa                                                                                               >  2:138036/1‑100 (MQ=255)
       cgcgATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGAACGCTTCGGCGCTGAc                                                                                              >  1:2161899/1‑100 (MQ=255)
        gcgATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACg                                                                                             >  2:2100382/1‑100 (MQ=255)
        gcgATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACg                                                                                             >  1:857110/1‑100 (MQ=255)
        gcgATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACACGATCGTTACGTCCGGACGCTTCGGCGCTGACg                                                                                             >  1:794774/1‑100 (MQ=255)
          gATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGcc                                                                                           >  1:3221464/1‑100 (MQ=255)
             cTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAg                                                                                        >  1:3190369/1‑100 (MQ=255)
                 ggTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGTTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGcc                                                                                           >  1:364807/1‑93 (MQ=255)
                 ggTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGcgcg                                                                                    >  2:2032835/1‑100 (MQ=255)
                  gTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGt                                                                                   >  2:1291057/1‑100 (MQ=255)
                  gTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGt                                                                                   <  1:2307518/100‑1 (MQ=255)
                  gTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGt                                                                                   >  2:3435370/1‑100 (MQ=255)
                    ttCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTc                                                                                 <  2:2478851/100‑1 (MQ=255)
                        ggcaatacctgctttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaatGCGCTGACGCCGAGCGCGTTCAgcg                                                                             >  2:79584‑M1/76‑100 (MQ=255)
                        cgATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAgcg                                                                             <  1:256193/100‑1 (MQ=255)
                        cgATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAgcg                                                                             <  1:98711/100‑1 (MQ=255)
                        cgATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAgcg                                                                             >  2:3604141/1‑100 (MQ=255)
                         gATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAgcgc                                                                            >  1:1870247/1‑100 (MQ=255)
                           tAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCAt                                                                          <  2:3221488/100‑1 (MQ=255)
                           aatacctgctttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaatGCGCTGACGCCGAGCGCGTTCAGCGCAt                                                                          >  1:584832‑M1/73‑100 (MQ=255)
                            atacctgctttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaatGCGCTGACGCCGAGCGCGTTCAGCGCAtt                                                                         >  1:2938544‑M1/72‑100 (MQ=255)
                            aGGCCGAGCCTGAGACTTTGCGGCCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCAtt                                                                         <  2:3637577/100‑1 (MQ=255)
                             ggCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTg                                                                        <  1:133807/100‑1 (MQ=255)
                             ggCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTg                                                                        >  2:1216166/1‑100 (MQ=255)
                               ccGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTg                                                                        <  1:947460/98‑1 (MQ=255)
                                cGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGc                                                                     >  2:163037/1‑100 (MQ=255)
                                cGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGc                                                                     <  2:513801/100‑1 (MQ=255)
                                 ggcacTGAGACTTTGCGGTGGCCTTAGACGGTTTCCACCCCCAGCGCATTACGTCCGGAGGCTTCGGCGCGGACAACGAGCGCCTTCAGCGCATTGAGca                                                                    <  1:1431771/96‑1 (MQ=255)
                                 gAGCCGCAGACGTTGCGGTCGCCGTCGCCGTGTTTCCCCACCCGCGCGTTACGTGCCGCCGCTGCGGCGCTGACGCCGAGCGCGTTCAGCGCATCGa                                                                       <  1:2584012/97‑1 (MQ=255)
                                  aGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGcac                                                                   <  1:3511365/100‑1 (MQ=255)
                                    tttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaagGCGCTGACGCCGAGTGCGTTCAGCGCATTGAGCACaa                                                                 >  2:3552803‑M1/64‑100 (MQ=255)
                                     cTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAAt                                                                <  2:2563806/100‑1 (MQ=255)
                                      tGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATc                                                               >  2:2439024/1‑100 (MQ=255)
                                       gagaCTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCg                                                              >  2:373722/1‑100 (MQ=255)
                                         gaCTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGAc                                                            >  2:3453617/1‑100 (MQ=255)
                                          aCTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACg                                                           >  2:1505698/1‑100 (MQ=255)
                                           cTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACg                                                           >  1:71788/1‑99 (MQ=255)
                                           cTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGt                                                          >  2:1099750/1‑100 (MQ=255)
                                           cTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGt                                                          >  2:481730/1‑100 (MQ=255)
                                            tttGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTg                                                         <  2:2698038/100‑1 (MQ=255)
                                              tGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGga                                                       <  1:1526656/100‑1 (MQ=255)
                                                cGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGGCGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGgaga                                                     >  2:3324655/1‑100 (MQ=255)
                                                  gTCGCCTTCGACGGTTTTCACCACCAGATCGGTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATa                                                   <  1:1296732/100‑1 (MQ=255)
                                                    cGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGt                                                 <  2:205183/100‑1 (MQ=255)
                                                      ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                               <  2:120800/100‑1 (MQ=255)
                                                      ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                               <  2:284128/100‑1 (MQ=255)
                                                      ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                               <  1:932568/100‑1 (MQ=255)
                                                       cTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGtt                                                <  1:1690548/98‑1 (MQ=255)
                                                        ttCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTa                                             <  2:959628/100‑1 (MQ=255)
                                                         tCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATCGTTTTAt                                            >  2:299251/1‑100 (MQ=255)
                                                           gACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGGTAGTTTTATc                                           <  1:3561292/99‑1 (MQ=255)
                                                             cGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTa                                        >  1:1204163/1‑100 (MQ=255)
                                                             cGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTa                                        >  1:2044876/1‑100 (MQ=255)
                                                                  ttCACCACCAGATCGTTACGTCCGGACGCTTCGGCGGTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCg                                   >  2:2613185/1‑100 (MQ=255)
                                                                  ttCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCg                                   >  1:447361/1‑100 (MQ=255)
                                                                   tCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCgg                                  <  2:1565368/100‑1 (MQ=255)
                                                                   tCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCgg                                  >  2:580003/1‑100 (MQ=255)
                                                                    caccacCAGATCGTTACGTCCGGGCGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGc                                 <  1:3324630/100‑1 (MQ=255)
                                                                    caccacCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGc                                 >  2:2917858/1‑100 (MQ=255)
                                                                    caccacCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGc                                 >  2:3636896/1‑100 (MQ=255)
                                                                      ccaccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCtt                               >  2:815253/1‑100 (MQ=255)
                                                                      ccaccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCtt                               >  2:327713/1‑100 (MQ=255)
                                                                      ccaccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCtt                               >  1:2361556/1‑100 (MQ=255)
                                                                       caccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTg                              <  1:971954/100‑1 (MQ=255)
                                                                       caccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTg                              <  2:922831/100‑1 (MQ=255)
                                                                        accaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGGCGTGGAGATAGGTTTATCGTACTCCGGCt                                >  1:3598029/1‑97 (MQ=255)
                                                                        accaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgc                             >  1:202601/1‑100 (MQ=255)
                                                                        accaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgc                             >  2:555754/1‑100 (MQ=255)
                                                                        accaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgc                             <  1:2804845/100‑1 (MQ=255)
                                                                           aGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccag                          >  1:1158514/1‑100 (MQ=255)
                                                                            gATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagc                         <  2:2782278/100‑1 (MQ=255)
                                                                            gATCGTTACGTCAGGACGCTTCGGCGCTGACGCCGAGCACGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagc                         <  2:179797/100‑1 (MQ=255)
                                                                             aTCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcc                        <  1:3425136/100‑1 (MQ=255)
                                                                              tagTTGCGTCCGGCCGCTTCGGCTTTGACGCCGAGCGCGTTCAGCGCACTGAGCACATTCCACGTGGAGATAGTTTTATCCTACGCCGGCTTgccag                          <  1:3035528/95‑1 (MQ=255)
                                                                              tCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcca                       <  2:744598/100‑1 (MQ=255)
                                                                              tCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcca                       <  2:2200308/100‑1 (MQ=255)
                                                                               cGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCAt                      <  2:196056/100‑1 (MQ=255)
                                                                                gTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcca                       <  2:1667935/98‑1 (MQ=255)
                                                                                 ttACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATaa                    >  2:773882/1‑100 (MQ=255)
                                                                                  tACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATaaa                   >  1:1962180/1‑100 (MQ=255)
                                                                                  tACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATaaa                   >  2:1456677/1‑100 (MQ=255)
                                                                                  cttccgatctcGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATaaa                   <  2:1754908/90‑1 (MQ=255)
                                                                                    cGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAgg                 <  1:269517/100‑1 (MQ=255)
                                                                                    cGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAgg                 >  2:3615340/1‑100 (MQ=255)
                                                                                      tCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCTAGCCATAAAGGTa               <  2:2487312/100‑1 (MQ=255)
                                                                                       ccGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGCGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaa              >  2:41259/1‑100 (MQ=255)
                                                                                       ccGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaa              >  1:1055633/1‑100 (MQ=255)
                                                                                        cGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaaa             <  2:2161912/100‑1 (MQ=255)
                                                                                          gACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGc           <  2:1887501/100‑1 (MQ=255)
                                                                                            cGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATaaaagatcggaag         >  1:1754900/1‑90 (MQ=255)
                                                                                             gCTTCGGCGCTGACGCTGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCTATTAAGGTACAGCAgg        <  1:1593196/100‑1 (MQ=255)
                                                                                              cTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGt       >  1:1833478/1‑100 (MQ=255)
                                                                                              cTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGt       >  1:2455675/1‑100 (MQ=255)
                                                                                                   GCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGc  >  2:3307800‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TGGAAGCCGCGATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGC  >  NC_000913/4623672‑4623870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.