New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4623771 =162 (1.230)16 (0.130) 8/164 NT 9.9% coding (347/1017 nt) lplA lipoate‑protein ligase A
?NC_000913 4623797 = 141 (1.160)coding (321/1017 nt) lplA lipoate‑protein ligase A
Rejected: Frequency below cutoff threshold.

Only 100 of 195 total aligned reads displayed.

TAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCA  >  NC_000913/4623699‑4623896
                                                                                                  |                                                                                                    
tAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCAt                                                                                                     <  2:3221488/100‑1 (MQ=255)
aatacctgctttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaatGCGCTGACGCCGAGCGCGTTCAGCGCAt                                                                                                     >  2:3620772‑M1/73‑100 (MQ=255)
aatacctgctttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaatGCGCTGACGCCGAGCGCGTTCAGCGCAt                                                                                                     >  1:584832‑M1/73‑100 (MQ=255)
 aGGCCGAGCCTGAGACTTTGCGGCCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCAtt                                                                                                    <  2:3637577/100‑1 (MQ=255)
  tacctgctttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaatgcgctgaacgcgctcggcgtcagcgcATTg                                                                                                   <  2:800003‑M2/4‑1 (MQ=255)
    cctgctttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaatGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑Ag                                                                                                >  2:508939‑M1/69‑100 (MQ=255)
    cctgctttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaatGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑Ag                                                                                                >  2:767739‑M1/69‑100 (MQ=255)
    cctgctttacctttatggctgacaagccggagtacgataagactatctccacgtcgattgtgctcaatGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑a                                                                                                 >  1:3587531‑M1/69‑99 (MQ=255)
    ccGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTg                                                                                                   <  1:947460/98‑1 (MQ=255)
    ccGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑Ag                                                                                                >  1:3559006/1‑100 (MQ=255)
     cGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGc                                                                                               <  2:513801/100‑1 (MQ=255)
     cGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGc                                                                                               <  2:3288917/100‑1 (MQ=255)
     cGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGc                                                                                               <  1:1291051/100‑1 (MQ=255)
      gAGCCGCAGACGTTGCGGTCGCCGTCGCCGTGTTTCCCCACCCGCGCGTTACGTGCCGCCGCTGCGGCGCTGACGCCGAGCGCGTTCAGCGCATCG‑a                                                                                                 <  1:2584012/97‑1 (MQ=255)
         tttacctttatggctggcaagccggagtacgataaaactatctccacgtcgattgtgctcaagGCGCTGACGCCGAGTGCGTTCAGCGCATTG‑AGCACaa                                                                                           >  2:3552803‑M1/64‑100 (MQ=255)
            gagaCTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCg                                                                                        >  2:373722/1‑100 (MQ=255)
               aCTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACg                                                                                     >  2:1505698/1‑100 (MQ=255)
                cTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGt                                                                                    >  2:1099750/1‑100 (MQ=255)
                 tttGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTg                                                                                   <  2:2698038/100‑1 (MQ=255)
                   tGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGga                                                                                 <  1:1526656/100‑1 (MQ=255)
                   tGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGga                                                                                 <  2:929835/100‑1 (MQ=255)
                    gCGGTCGCCTTCGACGGTTTTCACCACCAGCTCGTTACGTCCGGACGCTTCGGCGCTGACGCCGCGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGgag                                                                                >  2:2897116/1‑100 (MQ=255)
                     cGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGGCGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGgaga                                                                               >  2:3324655/1‑100 (MQ=255)
                      ggTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGAt                                                                              >  2:2799887/1‑100 (MQ=255)
                      ggTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGAt                                                                              >  2:3606253/1‑100 (MQ=255)
                         cGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGCCGTGGAGATAGt                                                                           <  2:2427511/100‑1 (MQ=255)
                         cGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGt                                                                           >  1:1435916/1‑100 (MQ=255)
                           ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGttt                                                                         <  1:932568/100‑1 (MQ=255)
                           ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGttt                                                                         <  2:120800/100‑1 (MQ=255)
                           ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACCCTTCCGCGCTGACGCCGAGCGCGTTCAGCGCATTC‑AGCACAATCgcc                                                                                      >  1:3206351/1‑85 (MQ=255)
                            cTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGtt                                                                          <  1:1690548/98‑1 (MQ=255)
                             ttCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTa                                                                       <  2:959628/100‑1 (MQ=255)
                              tCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATCGTTTTAt                                                                      >  2:299251/1‑100 (MQ=255)
                              tCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTAt                                                                      <  1:2399414/100‑1 (MQ=255)
                                gACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCg                                                                    >  2:2092200/1‑100 (MQ=255)
                                  cGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTa                                                                  >  1:1204163/1‑100 (MQ=255)
                                  cGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTa                                                                  >  1:2044876/1‑100 (MQ=255)
                                   ggTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTAc                                                                 >  1:3476450/1‑100 (MQ=255)
                                    gTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACt                                                                <  2:71788/100‑1 (MQ=255)
                                      tttCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTcc                                                              >  1:1883641/1‑100 (MQ=255)
                                       ttCACCACCAGATCGTTACGTCCGGACGCTTCGGCGGTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCg                                                             >  2:2613185/1‑100 (MQ=255)
                                       ttCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCg                                                             >  1:447361/1‑100 (MQ=255)
                                        tCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCgg                                                            >  2:580003/1‑100 (MQ=255)
                                         caccacCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGc                                                           >  2:3636896/1‑100 (MQ=255)
                                           ccaccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCtt                                                         >  2:481465/1‑100 (MQ=255)
                                           ccaccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCtt                                                         >  2:1620727/1‑100 (MQ=255)
                                           ccaccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCtt                                                         >  1:2996807/1‑100 (MQ=255)
                                            cacgcgATCGTTACGGTCTGACGCTTCGGCGCTGGCGCCGAGCGCGTTCAGGGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTg                                                        <  1:2889842/95‑1 (MQ=255)
                                            caccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTg                                                        <  1:971954/100‑1 (MQ=255)
                                             accaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGGCGTGGAGATAGGTTTATCGTACTCCGGCt                                                          >  1:3598029/1‑97 (MQ=255)
                                             accaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgc                                                       >  2:1363283/1‑100 (MQ=255)
                                             accaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgc                                                       >  2:555754/1‑100 (MQ=255)
                                                aGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccag                                                    >  1:1158514/1‑100 (MQ=255)
                                                 gATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagc                                                   <  1:1305884/100‑1 (MQ=255)
                                                 gATCGTTACGTCAGGACGCTTCGGCGCTGACGCCGAGCACGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagc                                                   <  2:179797/100‑1 (MQ=255)
                                                  aTCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcc                                                  <  2:2046230/100‑1 (MQ=255)
                                                   tCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcca                                                 <  2:2200308/100‑1 (MQ=255)
                                                    cGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCAt                                                <  2:196056/100‑1 (MQ=255)
                                                      ttACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATaa                                              >  2:773882/1‑100 (MQ=255)
                                                         cGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAgg                                           <  1:269517/100‑1 (MQ=255)
                                                          gTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGt                                          >  1:764289/1‑100 (MQ=255)
                                                          gTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGt                                          >  1:2309017/1‑100 (MQ=255)
                                                          gTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGt                                          >  1:198602/1‑100 (MQ=255)
                                                           tCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCTAGCCATAAAGGTa                                         <  2:2487312/100‑1 (MQ=255)
                                                            ncGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaa                                        >  2:3533568/2‑100 (MQ=255)
                                                            ccGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaa                                        >  1:1055633/1‑100 (MQ=255)
                                                             ttgtgctcaatgcgctgaacgcactcggcgtcagcgcCTTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaaa                                       >  2:3552803‑M2/38‑100 (MQ=255)
                                                             cGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaaa                                       <  2:2161912/100‑1 (MQ=255)
                                                               gACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGc                                     >  2:3445125/1‑100 (MQ=255)
                                                                aCGCTTCGTCGTTGTCGTCGGGCGCGTGCAGCGGCTTGCCGCA‑AATCGACGTAGAGATAGCTATATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGc                                     <  1:873199/99‑1 (MQ=255)
                                                                 cGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATaaaagatcggaag                                   >  1:1754900/1‑90 (MQ=255)
                                                                 cGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAg                                   >  2:3256127/1‑100 (MQ=255)
                                                                  gCTTCGGCGCTGACGCTGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCTATTAAGGTACAGCAgg                                  <  1:1593196/100‑1 (MQ=255)
                                                                   tcaatgcgctgaacgcgctcggcgtcagcgcATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGt                                 >  1:2569144‑M2/32‑100 (MQ=255)
                                                                   cTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAgg                                  >  1:3337139/1‑99 (MQ=255)
                                                                   cTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGt                                 >  1:1833478/1‑100 (MQ=255)
                                                                    caatgcgctgaacgcgctcggcgtcagcgcATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTa                                >  1:652966‑M2/31‑100 (MQ=255)
                                                                     aatgcgctgaacgcgctcggcgtcagcgcATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTAt                               >  1:2938544‑M2/30‑100 (MQ=255)
                                                                         cgctgaacgcgctcggcgtcagcgcATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGcc                           >  2:79584‑M2/26‑100 (MQ=255)
                                                                         cgctgaacgcgctcggcgtcagcgcATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGcc                           >  2:1825373‑M2/26‑100 (MQ=255)
                                                                         cgctgaacgcgctcggcgtcagcgcATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGcc                           >  2:838112‑M2/26‑100 (MQ=255)
                                                                               cGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGAt                      <  1:616796/99‑1 (MQ=255)
                                                                               cGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATc                     <  1:373721/100‑1 (MQ=255)
                                                                                   gAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTgg                 <  2:1706527/100‑1 (MQ=255)
                                                                                   gAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTgg                 <  1:2911520/100‑1 (MQ=255)
                                                                                   gAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTgg                 <  2:1758636/100‑1 (MQ=255)
                                                                                    aGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGa                >  2:2477156/1‑100 (MQ=255)
                                                                                     gcgcGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGCTCGTGGa                <  2:1938463/99‑1 (MQ=255)
                                                                                     gcgcGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGaa               >  2:2918655/1‑100 (MQ=255)
                                                                                     gcgcGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGa                >  1:2539785/1‑99 (MQ=255)
                                                                                      cgcgTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGa                <  2:2072010/98‑1 (MQ=255)
                                                                                      cgcgTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAac              <  1:2030963/100‑1 (MQ=255)
                                                                                      cgcgTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAac              <  2:14524/100‑1 (MQ=255)
                                                                                       gcgTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAaca             >  1:1393629/1‑100 (MQ=255)
                                                                                       gcgTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAac              <  1:3054853/99‑1 (MQ=255)
                                                                                         gTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACAcc           >  2:1672464/1‑100 (MQ=255)
                                                                                          ttCAGCCCATTG‑AACAAAATAGACGTGGAGATAGTTTTATCGTACTACGGCATGCCAGCCATAATGGTAAAACACGCATCGCCGCGATCGTGCAacac            <  1:2205362/98‑1 (MQ=255)
                                                                                               cgcATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGcgccg     <  2:2350832‑M2/97‑1 (MQ=255)
                                                                                                 cATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCgccgcc   >  2:1250415‑M2/2‑100 (MQ=255)
                                                                                                 cATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCgccgcc   <  2:163275‑M2/99‑1 (MQ=255)
                                                                                                  |                                                                                                    
TAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTG‑AGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCGCGCCGCCA  >  NC_000913/4623699‑4623896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.