| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636885 | 107 (0.810) | 6 (0.050) | 4/168 | NT | 5.4% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 110 (0.890) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
Only 100 of 154 total aligned reads displayed.
AACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATA > NC_000913/4636787‑4636984 | aaacGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCa > 2:599059/4‑100 (MQ=255) cGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATgg > 2:1489952/1‑100 (MQ=255) gggCGTGCGAAGGGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATggg < 1:2928531/100‑1 (MQ=255) ggCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGc > 2:3142121/1‑100 (MQ=255) gCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCa < 1:799460/100‑1 (MQ=255) gCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTg < 2:2222689/100‑1 (MQ=255) ngAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTgg > 2:508681/2‑100 (MQ=255) cGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTgg > 2:3292004/1‑100 (MQ=255) cGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTgg > 2:279898/1‑100 (MQ=255) aaGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGgcg < 2:95905/100‑1 (MQ=255) aaGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGgcg < 2:1201276/100‑1 (MQ=255) agCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAg < 1:162374/100‑1 (MQ=255) agCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAg < 2:1181229/100‑1 (MQ=255) agCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAg < 1:1342589/100‑1 (MQ=255) gCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGg < 2:1358794‑M2/100‑2 (MQ=255) gCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGg > 2:2082606‑M2/1‑99 (MQ=255) gCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGg > 1:970347‑M2/1‑99 (MQ=255) cAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgc < 2:1360524‑M2/100‑3 (MQ=255) cAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgc < 1:3429340‑M2/100‑3 (MQ=255) aaCGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgcg < 2:3525680‑M2/100‑4 (MQ=255) cGGAGGGGACGTTGATCGCCACCGCAACGTTGCTGGCGGAGCTGGCGCGTCACGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgcgtt > 1:920838‑M2/1‑95 (MQ=255) cGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCctgcgccagttgcccatgcgtt < 2:3227280‑M1/100‑23 (MQ=255) cGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGGCCCGATTTGCTCTCTGGGGACCCAACGCctgcgccagttgcccatgcgtt < 1:2504353‑M1/100‑23 (MQ=255) aggtgggtACGTTGAGCGCCACCGAAAGGGTGCTGGCGGAGTCGGCGCGTCCCGGTTTGCTCATTGCGGACCCAACGCATGGACAACTCGCTCAGTCGt < 1:2229156/95‑1 (MQ=255) ggAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCctgcgccagttgcccatgcgttg < 2:3560978‑M1/100‑24 (MQ=255) aGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCctgcgccagttgcccatgcgttggg < 1:2706712‑M1/100‑26 (MQ=255) aGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTaa > 1:867891/1‑100 (MQ=255) aGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTaa > 1:146672/1‑100 (MQ=255) aGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTaa < 2:215644/100‑1 (MQ=255) gggtACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCctgcgccagttgcccatgcgttgggt < 1:366485‑M1/100‑27 (MQ=255) ggggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAAt < 2:3597291/100‑1 (MQ=255) ggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCa < 1:792675/100‑1 (MQ=255) cGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCt > 1:296736/1‑100 (MQ=255) tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTaca > 1:1925784/1‑100 (MQ=255) aTCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCCACTGGAGCAGGCGTTTAATCAGCTacaac > 1:1218001/1‑100 (MQ=255) aTCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaac < 2:2411135/100‑1 (MQ=255) aTCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaac > 1:215354/1‑100 (MQ=255) tCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaaca < 1:1014204/100‑1 (MQ=255) tCGACACCGCAACGTGGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaac < 1:326128/99‑1 (MQ=255) cGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAgatcggaaga > 2:447026/1‑91 (MQ=255) cGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACAt < 1:3302728/100‑1 (MQ=255) cGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACAt > 2:1894164/1‑100 (MQ=255) cGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACAt > 2:452606/1‑100 (MQ=255) cGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACAt < 2:74759/100‑1 (MQ=255) gACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATc > 2:3462251/1‑100 (MQ=255) gACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATc > 2:2766922/1‑100 (MQ=255) gACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATc < 1:2983176/100‑1 (MQ=255) acacCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCg > 2:520304/1‑100 (MQ=255) acCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATCTGCTCTCTGGGGAGCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGcc < 1:1100907/100‑1 (MQ=255) cGCAACGTTGCTGGCGGAGCTGGGGCGTACCGATTTGCTCTATGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGacc > 1:243045/1‑99 (MQ=255) cAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGtt > 2:1826960/1‑100 (MQ=255) cAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGtt > 2:1520819/1‑100 (MQ=255) aCGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTc < 1:1977143/100‑1 (MQ=255) cGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTcg > 2:1718760/1‑100 (MQ=255) gCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGcc < 2:85897/100‑1 (MQ=255) gCTGGCGGAGCTGGCGCGTCCCGATTTGCTCCCTGGGGACCCAACGCCTGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGcc < 2:2949433/100‑1 (MQ=255) aGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCgg < 1:2166024/100‑1 (MQ=255) tGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTgg > 2:823053/1‑100 (MQ=255) tGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTgg < 2:551964/100‑1 (MQ=255) tGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTgg < 1:279898/100‑1 (MQ=255) ggCGCGTCCCGATTTGCTCTCTGGTGACCCAACGCATGCGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGc < 1:548700/100‑1 (MQ=255) ggCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGc < 1:1303863/100‑1 (MQ=255) ggCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATACCGGTCGc > 1:3141599/1‑100 (MQ=255) gcgcGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCa < 1:2505419/100‑1 (MQ=255) cgcgTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCAt > 2:1221886/1‑100 (MQ=255) gTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTaa > 2:107218/1‑100 (MQ=255) gTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTaa > 1:3611505/1‑100 (MQ=255) tCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAAc > 1:457520/1‑100 (MQ=255) ccGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACaa > 2:125468/1‑100 (MQ=255) ccGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACaa > 1:2731049/1‑100 (MQ=255) ccGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCACGTTTCGCGCCAACATCGGTCGCATTCACaa > 1:1075389/1‑100 (MQ=255) ccGAGTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAAc < 1:945404/98‑1 (MQ=255) ggtgtctGGGGATCCAGTGCATGGGCGAGTTGCGCAGGCGTCTAATCGTCTACGACATCGCCCGTTTCGCGCAAATATCGGTGGCATTAACAAAGTgc < 1:294970/94‑1 (MQ=255) gCTCTCTGGGGACCCAACGCATGGGCAACTGGCGGAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTgcgc < 1:2502102/100‑1 (MQ=255) ctctctGGGGACCCAACGCATGGGCAACTGGTGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCa < 2:1386805/100‑1 (MQ=255) ctctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCCATATCGGTGGCAGTAACAACCTgcg > 1:1165391/1‑98 (MQ=255) tctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCaa > 2:2291437/1‑100 (MQ=255) ggggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAat < 1:3291979/100‑1 (MQ=255) gggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGa < 1:3478570/97‑1 (MQ=255) gggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAata < 1:1408876/100‑1 (MQ=255) aCCCAACGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccc < 1:1958417‑M2/100‑75 (MQ=255) aCCCAACGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtaccc < 1:366485‑M2/100‑75 (MQ=255) aCCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCa < 1:807444/100‑1 (MQ=255) cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCan < 1:1530898/100‑2 (MQ=255) cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCAt > 2:3330582/1‑100 (MQ=255) cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCAt > 2:1772270/1‑100 (MQ=255) cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCAt > 2:550530/1‑100 (MQ=255) cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCACGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCa < 1:2551080/99‑1 (MQ=255) ccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATTAATATCATg > 1:1113926/1‑100 (MQ=255) ccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATg > 2:2266893/1‑100 (MQ=255) aaCGCctgcgccagttgcccatgcgttgggtccccagagagcaaatcgtgacgcgccagctccgccagcaacgttgcggtggcgatcaacgtcccctccg > 1:920838‑M1/1‑5 (MQ=255) aaCGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccg < 2:3227280‑M2/100‑79 (MQ=255) aaCGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTc < 2:3494815/100‑1 (MQ=255) aCGCctgcgccagttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccgt < 2:2373374‑M1/100‑97 (MQ=255) ngcctgcgccagttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcacctccgtt > 1:1326251‑M1/2‑3 (MQ=255) cGCctgcgccagttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccgtt < 2:1496944‑M1/100‑98 (MQ=255) cGCctgcgccagttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccgtt > 2:3190761‑M1/1‑3 (MQ=255) cctgcgccagttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccgttgc < 2:1358794‑M1/100‑100 (MQ=255) cATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCtata > 2:2656251/1‑100 (MQ=255) cATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCta < 1:176792/98‑1 (MQ=255) | AACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATA > NC_000913/4636787‑4636984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |