New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 474269 =NA (NA)11 (0.090) 5/166 NT NA intergenic (+17/+32) amtB/tesB ammonium transporter/acyl‑CoA thioesterase 2
?NC_000913 474296 = NA (NA)intergenic (+44/+5) amtB/tesB ammonium transporter/acyl‑CoA thioesterase 2

Only 100 of 132 total aligned reads displayed.

CGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAA  >  NC_000913/474170‑474368
                                                                                                   |                                                                                                    
cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                      >  2:3594052/1‑100 (MQ=255)
cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                      >  2:2671275/1‑100 (MQ=255)
cGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAAc                                                                                                      <  1:2164746/100‑1 (MQ=255)
    tGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGcc                                                                                                  <  2:1136170/100‑1 (MQ=255)
      gTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCgg                                                                                                >  1:3474215/1‑100 (MQ=255)
           cGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGt                                                                                           >  1:941157/1‑100 (MQ=255)
             tgtACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGttt                                                                                         >  2:2823526/1‑100 (MQ=255)
                  cGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCAcc                                                                                    <  2:1298536/100‑1 (MQ=255)
                  cGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCAcc                                                                                    >  2:1688702/1‑100 (MQ=255)
                  cGGAAGAGCAGGACCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCAcc                                                                                    >  2:2484745/1‑100 (MQ=255)
                   ggAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCt                                                                                   >  2:1492576/1‑100 (MQ=255)
                          cAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGc                                                                              <  2:3017621/98‑1 (MQ=255)
                           aGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAACACAGCCGGACGGTTTTCACCTCCGGCTAt                                                                           >  1:27809/1‑100 (MQ=255)
                              aGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttt                                                                        >  1:1687045/1‑100 (MQ=255)
                                cccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                      >  2:2470986‑M1/68‑100 (MQ=255)
                                cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTACGGCTAttttt                                                                       >  1:2570777/1‑99 (MQ=255)
                                 gagaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                     >  2:120805/1‑100 (MQ=255)
                                 ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                     >  2:2967928‑M1/67‑100 (MQ=255)
                                 ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                     >  1:2486599‑M1/67‑100 (MQ=255)
                                 ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                     >  2:2327692‑M1/67‑100 (MQ=255)
                                 ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                     >  2:2557286‑M1/67‑100 (MQ=255)
                                  caagacggcgtactggttgcctcgaccgtacaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                     >  1:158590‑M1/66‑99 (MQ=255)
                                  agaAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCGATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTa                                                                   >  1:1965141/1‑100 (MQ=255)
                                    agacggcgtactggttgcctcgaccgttcaggaagtggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAAt                                                                 >  2:1476103‑M1/64‑100 (MQ=255)
                                      gggCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAAtt                                                                >  2:3216137/1‑99 (MQ=255)
                                      gggCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                               >  1:777558/1‑100 (MQ=255)
                                      acggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                               >  2:3307983‑M1/62‑100 (MQ=255)
                                      acggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                               >  1:3117062‑M1/62‑100 (MQ=255)
                                       ggCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgt                                                              >  2:1264809/1‑100 (MQ=255)
                                        gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                             >  1:2980873/1‑100 (MQ=255)
                                        gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                             <  2:777563/100‑1 (MQ=255)
                                        gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                             >  2:777541/1‑100 (MQ=255)
                                         gcgtactggttgcctcgaccgttcagtaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTTAATtgtg                                                             >  1:2133076‑M1/59‑100 (MQ=255)
                                         cTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGa                                                            <  1:2995743/100‑1 (MQ=255)
                                              tGTCAACAGCCACGACGAGAATGACTATAACGGGTAACAAGCACTGGAAAAAACAGCTGGACGGTTTTCACCGCAGGCTATTTTTTTAATTGTGATTa                                                         >  1:1230525/1‑98 (MQ=255)
                                               gTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGc                                                      >  1:1308593/1‑100 (MQ=255)
                                                tCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCa                                                     >  2:194445/1‑100 (MQ=255)
                                                  aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATc                                                   >  1:1762097/1‑100 (MQ=255)
                                                   tcAGCCACGGCGAGAATGCCTATAACGCGTAACATGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCa                                                  <  1:1951521/99‑1 (MQ=255)
                                                    cAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCaa                                                 >  2:1951534/1‑99 (MQ=255)
                                                    cAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAc                                                 >  1:860438/1‑100 (MQ=255)
                                                      gCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTagatcggaaga                                               >  2:2060836/1‑90 (MQ=255)
                                                      gCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAccc                                               >  1:1962773/1‑100 (MQ=255)
                                                      gCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAccc                                               >  1:528786/1‑100 (MQ=255)
                                                      gCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAccc                                               >  1:2511186/1‑100 (MQ=255)
                                                        cACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCt                                             >  2:1206686/1‑100 (MQ=255)
                                                        cACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCt                                             >  2:2374814/1‑100 (MQ=255)
                                                         aCGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCtt                                            <  1:535571/100‑1 (MQ=255)
                                                         aCGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCtt                                            <  2:3385197/100‑1 (MQ=255)
                                                           ggCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTcc                                          <  2:1951938/100‑1 (MQ=255)
                                                           ggCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTcc                                          <  2:884470/100‑1 (MQ=255)
                                                            gCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCt                                         <  1:2875327/100‑1 (MQ=255)
                                                            gCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCt                                         >  2:2678444/1‑100 (MQ=255)
                                                             ttccgatctcTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTg                                        <  2:3641080/91‑1 (MQ=255)
                                                               agaATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGaa                                      <  2:492720/100‑1 (MQ=255)
                                                                gaATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAAc                                     >  2:1805419/1‑100 (MQ=255)
                                                                 cttGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACg                                    <  2:2938171/98‑1 (MQ=255)
                                                                  aTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACgg                                   <  1:1478435/100‑1 (MQ=255)
                                                                  aTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACgg                                   <  2:411256/100‑1 (MQ=255)
                                                                   tGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACgag                                  >  1:2938150/1‑98 (MQ=255)
                                                                    gCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTc                                 <  2:1310433/100‑1 (MQ=255)
                                                                    gCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTc                                 <  1:1781074/100‑1 (MQ=255)
                                                                     ccTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCg                                >  2:459132/1‑100 (MQ=255)
                                                                     ccTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCg                                >  2:1868197/1‑100 (MQ=255)
                                                                      cTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGagatcggaa                               >  1:3641051/1‑92 (MQ=255)
                                                                       tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                              <  1:3091103/100‑1 (MQ=255)
                                                                       tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                              <  2:3590653/100‑1 (MQ=255)
                                                                       tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                              <  2:315183/100‑1 (MQ=255)
                                                                        ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             <  1:2698699/100‑1 (MQ=255)
                                                                        ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             <  2:2117405/100‑1 (MQ=255)
                                                                        ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             <  2:2450968/100‑1 (MQ=255)
                                                                        ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                             <  2:2914510/100‑1 (MQ=255)
                                                                        ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGATCGAg                              >  1:1875939/1‑99 (MQ=255)
                                                                         taACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGc                            >  1:1697250/1‑100 (MQ=255)
                                                                          aaCGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCCCCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCa                           <  1:2370566/100‑1 (MQ=255)
                                                                            cgcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAc                         >  2:2292057/1‑100 (MQ=255)
                                                                            cgcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAc                         >  2:1624300/1‑100 (MQ=255)
                                                                              cgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGc                            >  1:3334910/1‑95 (MQ=255)
                                                                               gTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAg                      <  2:170140/100‑1 (MQ=255)
                                                                                  aCAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGCGGCAACCAGTAc                   >  1:1536632/1‑100 (MQ=255)
                                                                                  aCAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGCCCACCCGt                     >  2:2797562/1‑98 (MQ=255)
                                                                                   cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACg                  <  2:2027604/100‑1 (MQ=255)
                                                                                   cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACg                  >  2:1071869/1‑100 (MQ=255)
                                                                                           gtaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg          <  2:2509989‑M1/92‑1 (MQ=255)
                                                                                           ggaaacaaCAGCCGGACGGTTTTCACCCCCGTCTATATTGTTAATTGGGATTACGCAGCACCCCTTCCTAAAGGGTCGAGTCAACCAGTACGCCGTCTTg          <  1:840643/98‑1 (MQ=255)
                                                                                           gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg          >  1:1002776/1‑100 (MQ=255)
                                                                                           gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGCCtt           >  1:364314/1‑99 (MQ=255)
                                                                                           gCAAAAAACAGCCGGACGGTTTTCACCCCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg          >  1:780216/1‑100 (MQ=255)
                                                                                            cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg         >  1:308029/1‑100 (MQ=255)
                                                                                            cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg         <  1:3216113/100‑1 (MQ=255)
                                                                                            cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg         >  2:1514275/1‑100 (MQ=255)
                                                                                            cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg         <  1:1090783/100‑1 (MQ=255)
                                                                                             aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        >  2:2852604‑M1/7‑100 (MQ=255)
                                                                                             aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        >  1:2721987‑M1/7‑100 (MQ=255)
                                                                                             aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg        >  2:3334935‑M1/7‑100 (MQ=255)
                                                                                              aaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGt       >  1:498731‑M1/6‑100 (MQ=255)
                                                                                               aaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGta      >  1:1514268‑M1/5‑100 (MQ=255)
                                                                                                   cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa  <  2:1278314/100‑1 (MQ=255)
                                                                                                   cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa  <  1:3626754/100‑1 (MQ=255)
                                                                                                   cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa  >  2:1423926/1‑100 (MQ=255)
                                                                                                   |                                                                                                    
CGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAA  >  NC_000913/474170‑474368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.