New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 474269 =NA (NA)11 (0.090) 5/166 NT NA intergenic (+17/+32) amtB/tesB ammonium transporter/acyl‑CoA thioesterase 2
?NC_000913 474296 = NA (NA)intergenic (+44/+5) amtB/tesB ammonium transporter/acyl‑CoA thioesterase 2

Only 100 of 156 total aligned reads displayed.

AGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGC  >  NC_000913/474197‑474395
                                                                                                   |                                                                                                    
   aGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttt                                                                                                   >  1:1687045/1‑100 (MQ=255)
    acccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggtgaaaaccgtccggctgttttt                                                                                                  >  1:498731‑M2/96‑100 (MQ=255)
    acccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggtgaaaaccgtccggctgttttt                                                                                                  >  2:2871350‑M2/96‑100 (MQ=255)
     cccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggtgaaaaccgtccggctgtttttt                                                                                                 >  1:2721987‑M2/95‑100 (MQ=255)
     cccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggtgaaaaccgtccggctgtttttt                                                                                                 >  2:3334935‑M2/95‑100 (MQ=255)
     cccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaatagccggaggtgaaaaccgtccggctgtttttt                                                                                                 >  2:2852604‑M2/95‑100 (MQ=255)
     cccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                                                 >  2:2470986‑M1/68‑100 (MQ=255)
     cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                                                 <  2:921080/100‑1 (MQ=255)
     cGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTACGGCTAttttt                                                                                                  >  1:2570777/1‑99 (MQ=255)
     cGAGAAGGGCTGGATGTCAACACCCACGGCGGGAACGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTAtttttt                                                                                                 <  2:3249234/100‑1 (MQ=255)
      ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                                                >  2:2967928‑M1/67‑100 (MQ=255)
      ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                                                >  2:1505415‑M1/67‑100 (MQ=255)
      ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                                                >  1:2486599‑M1/67‑100 (MQ=255)
      ccaagacggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                                                >  2:2557286‑M1/67‑100 (MQ=255)
       caagacggcgtactggttgcctcgaccgtacaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTAttttttt                                                                                                >  1:158590‑M1/66‑99 (MQ=255)
           gggCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                                                          <  1:1966154/100‑1 (MQ=255)
           gggCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                                                          >  1:777558/1‑100 (MQ=255)
           acggcgtactggttgcctcgaccgttcaggaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtg                                                                                          >  1:3117062‑M1/62‑100 (MQ=255)
             gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                                                        <  2:777563/100‑1 (MQ=255)
             gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                                                        <  1:3047499/100‑1 (MQ=255)
             gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                                                        >  1:2980873/1‑100 (MQ=255)
             gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                                                        <  1:2671065/100‑1 (MQ=255)
             gCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATtgtg                                                                                        >  2:777541/1‑100 (MQ=255)
              gcgtactggttgcctcgaccgttcagtaaggggtgatgcgtaatcacaattaaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTTAATtgtg                                                                                        >  1:2133076‑M1/59‑100 (MQ=255)
                   tGTCAACAGCCACGACGAGAATGACTATAACGGGTAACAAGCACTGGAAAAAACAGCTGGACGGTTTTCACCGCAGGCTATTTTTTTAATTGTGATTa                                                                                    >  1:1230525/1‑98 (MQ=255)
                    gTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGc                                                                                 >  1:1308593/1‑100 (MQ=255)
                       aaCAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATc                                                                              >  1:1762097/1‑100 (MQ=255)
                        tcAGCCACGGCGAGAATGCCTATAACGCGTAACATGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCa                                                                             <  1:1951521/99‑1 (MQ=255)
                         cAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCaa                                                                            >  2:1951534/1‑99 (MQ=255)
                         cAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAc                                                                            >  1:860438/1‑100 (MQ=255)
                           gCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTagatcggaaga                                                                          >  2:2060836/1‑90 (MQ=255)
                           gCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCAccc                                                                          >  1:1962773/1‑100 (MQ=255)
                             cACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCt                                                                        >  2:1206686/1‑100 (MQ=255)
                              aCGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCtt                                                                       <  2:3385197/100‑1 (MQ=255)
                              aCGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCtt                                                                       <  1:535571/100‑1 (MQ=255)
                                ggCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTcc                                                                     <  2:884470/100‑1 (MQ=255)
                                ggCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTcc                                                                     <  2:1951938/100‑1 (MQ=255)
                                 gCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCt                                                                    >  2:2678444/1‑100 (MQ=255)
                                 gCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCt                                                                    <  1:2875327/100‑1 (MQ=255)
                                  ttccgatctcTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTg                                                                   <  2:3641080/91‑1 (MQ=255)
                                  cGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCCTCACCCCTTCCTg                                                                   <  2:2509645/100‑1 (MQ=255)
                                     gaATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAAc                                                                >  2:1805419/1‑100 (MQ=255)
                                     gaATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAAc                                                                >  2:1220619/1‑100 (MQ=255)
                                      aaTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACg                                                               <  1:3618037/100‑1 (MQ=255)
                                       aTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACgg                                                              <  1:1478435/100‑1 (MQ=255)
                                       aTGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACgg                                                              <  2:411256/100‑1 (MQ=255)
                                        tGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACgag                                                             >  1:2938150/1‑98 (MQ=255)
                                          ccTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCg                                                           >  2:459132/1‑100 (MQ=255)
                                          ccTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCg                                                           >  2:1868197/1‑100 (MQ=255)
                                           cTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGagatcggaa                                                          >  1:3641051/1‑92 (MQ=255)
                                            tataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAg                                                         <  2:315183/100‑1 (MQ=255)
                                             ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        <  2:2450968/100‑1 (MQ=255)
                                             ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        <  1:2698699/100‑1 (MQ=255)
                                             ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        <  2:2117405/100‑1 (MQ=255)
                                             ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAgg                                                        <  2:2914510/100‑1 (MQ=255)
                                             ataACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGATCGAg                                                         >  1:1875939/1‑99 (MQ=255)
                                              taACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGc                                                       >  1:1698316/1‑100 (MQ=255)
                                              taACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGGCGAGGc                                                       >  2:1090789/1‑100 (MQ=255)
                                               aaCGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCCCCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCa                                                      <  1:2370566/100‑1 (MQ=255)
                                                aCGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCaa                                                     >  2:1369169/1‑100 (MQ=255)
                                                 cgcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAc                                                    >  2:1624300/1‑100 (MQ=255)
                                                 cgcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAc                                                    >  2:2292057/1‑100 (MQ=255)
                                                 cgcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATAACCCCTTCCTGAACGGTCGAGGCaa                                                     >  1:3121454/1‑99 (MQ=255)
                                                  gcgTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAAcc                                                   >  1:2852584/1‑100 (MQ=255)
                                                    gTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAg                                                 <  2:170140/100‑1 (MQ=255)
                                                       aCAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGCGGCAACCAGTAc                                              >  1:1536632/1‑100 (MQ=255)
                                                        cAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACg                                             <  2:2027604/100‑1 (MQ=255)
                                                            caattaaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGt                                         >  2:3307983‑M2/40‑100 (MQ=255)
                                                              attaaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCACTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCt                                       >  2:1476103‑M2/38‑100 (MQ=255)
                                                                gtaaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg                                     <  2:2509989‑M1/92‑1 (MQ=255)
                                                                gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg                                     >  1:1002776/1‑100 (MQ=255)
                                                                gCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGCCtt                                      >  1:364314/1‑99 (MQ=255)
                                                                gCAAAAAACAGCCGGACGGTTTTCACCCCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTg                                     >  1:780216/1‑100 (MQ=255)
                                                                 cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg                                    <  1:1090783/100‑1 (MQ=255)
                                                                 cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg                                    <  1:3216113/100‑1 (MQ=255)
                                                                 cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg                                    >  1:308029/1‑100 (MQ=255)
                                                                 cAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg                                    >  2:1514275/1‑100 (MQ=255)
                                                                 aaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg                                    >  2:2557286‑M2/35‑100 (MQ=255)
                                                                 aaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg                                    >  2:2327692‑M2/35‑100 (MQ=255)
                                                                 aaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg                                    >  1:2486599‑M2/35‑100 (MQ=255)
                                                                 aaaaaaatagccggaggtgaaaaccgtccggctgTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTgg                                    >  2:2967928‑M2/35‑100 (MQ=255)
                                                                  aaaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTggg                                   >  2:2852604‑M1/7‑100 (MQ=255)
                                                                   aaaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGt                                  >  1:498731‑M1/6‑100 (MQ=255)
                                                                    aaaaCAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGta                                 >  1:1514268‑M1/5‑100 (MQ=255)
                                                                        cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa                             <  2:1278314/100‑1 (MQ=255)
                                                                        cAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATaaa                             >  2:1423926/1‑100 (MQ=255)
                                                                          gCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAGCCAGTACGCCGTCTTGGGTATAAAAc                           <  1:3345167/100‑1 (MQ=255)
                                                                          gCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAAc                           >  2:3229042/1‑100 (MQ=255)
                                                                          gCCGGACGGTGTTCACCTCCGGCTATATGTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAAc                           <  2:993850/100‑1 (MQ=255)
                                                                                  gTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACcgcg                   >  2:2578629/1‑100 (MQ=255)
                                                                                         ccTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAg            >  2:3477660/1‑100 (MQ=255)
                                                                                         ccTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAg            <  1:2407163/100‑1 (MQ=255)
                                                                                           tCCGGCTATTTTTTTAATTGCGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGcc          >  1:2259095/1‑100 (MQ=255)
                                                                                            ccGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCa         >  2:1023976/1‑100 (MQ=255)
                                                                                            ccGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCa         >  1:2751471/1‑100 (MQ=255)
                                                                                             cGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCAc        >  2:2688860/1‑100 (MQ=255)
                                                                                             cGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCAc        <  1:1878736/100‑1 (MQ=255)
                                                                                              ggCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACAGGGCACAAAGCCACg       >  2:3323550/1‑100 (MQ=255)
                                                                                                  aTTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTgcg   <  2:3484356/100‑1 (MQ=255)
                                                                                                   TTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTgcgc  <  2:1308599‑M2/100‑1 (MQ=255)
                                                                                                   |                                                                                                    
AGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAACAAGCACTGCAAAAAACAGCCGGACGGTTTTCACCTCCGGCTATTTTTTTAATTGTGATTACGCATCACCCCTTCCTGAACGGTCGAGGCAACCAGTACGCCGTCTTGGGTATAAAACTCACCGCGCACAAAGCCACGTGCGC  >  NC_000913/474197‑474395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.