| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4008401 = | NA (NA) | 9 (0.070) | 7/164 | NT | NA | noncoding (5/34 nt) | REP289 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP289 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 4008431 = | NA (NA) | intergenic (+54/+8) | rhtC/rhtB | threonine efflux pump/homoserine, homoserine lactone and S‑methyl‑methionine efflux pump | |||||
Only 100 of 204 total aligned reads displayed.
GGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCTTCATCTGCTTTGGTCCTT > NC_000913/4008332‑4008530 | gattttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatgtcggataaggcgtttacgccgcatccgaca < 2:1405482‑M2/1‑1 (MQ=255)gattttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGACa > 1:97699‑M1/70‑100 (MQ=255) cGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACatt > 1:673016/1‑100 (MQ=255) cGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACatt < 1:1631187/100‑1 (MQ=255) tttcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGACatta > 2:2602047‑M1/67‑100 (MQ=255) gTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACatta > 1:3612968/1‑100 (MQ=255) tcggctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGACatta‑tt > 1:393011‑M1/65‑100 (MQ=255) tttGCCGTATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑tttt < 2:1079167/100‑1 (MQ=255) tttGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑tttt < 2:2119623/100‑1 (MQ=255) gctcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑ttttt > 2:768243‑M1/62‑100 (MQ=255) tcgttgtttatgctggtgggagcgctgttagcatcggcgaggcatgcgtgaaaaataatgtcggataaggcgtttacgccgcatccgacATTA‑TTTTTCa < 2:1107459‑M2/11‑1 (MQ=255) gCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCa < 2:1577933/100‑1 (MQ=255) gCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCa < 1:2054943/100‑1 (MQ=255) ccGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCa < 1:2193663/99‑1 (MQ=255) ccGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCAc > 2:1224311/1‑100 (MQ=255) ccGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCAc < 1:1137374/100‑1 (MQ=255) ccGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCAc < 1:2415865/100‑1 (MQ=255) ggATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGc > 1:3492075/1‑100 (MQ=255) ggATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGc < 1:1014215/100‑1 (MQ=255) gATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCa < 2:1472684/100‑1 (MQ=255) aTTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATGAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCAt > 1:2406344/1‑100 (MQ=255) aTTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCAt < 2:314861/100‑1 (MQ=255) tttGGCATTCATTTGATTATTTGGCGTTGATGCCAGACGCGTCGTCAGAGTAATCCGGATAAGGCGTTTACGCCTCATCCGACATTA‑TTTTTc < 1:2273813/93‑1 (MQ=37) tttGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATg < 2:183681/100‑1 (MQ=255) tGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCAGCATCCGACATTA‑TTTTTCACGCATGc > 1:2843459/1‑99 (MQ=255) cattcattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCg > 2:90739/1‑100 (MQ=255) cattcattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCg > 1:422390/1‑100 (MQ=255) cattcattTGATTATTTCGCGGTGATGCCAGACGAGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCg < 1:1951533/100‑1 (MQ=255) attcattTGATTATTTCGAGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTGTACGCCGCAGCCGACATTA‑TTTTTCACGCATGCCTCGc < 1:2668115/100‑1 (MQ=255) ttcattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGcc < 1:2472448/100‑1 (MQ=255) tcattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCg < 2:2747429/100‑1 (MQ=255) tcattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCg < 1:3116879/100‑1 (MQ=255) cattTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGa > 1:3265318/1‑100 (MQ=255) attTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGAt > 1:2310266/1‑100 (MQ=255) tttGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATg > 1:626783/1‑100 (MQ=255) tGATTATTTCGCGGTGATGGCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGc < 1:1678970/99‑1 (MQ=255) gATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTa > 2:1967577/1‑100 (MQ=255) gATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTa > 1:1438374/1‑100 (MQ=255) attattTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTaa < 2:804103/100‑1 (MQ=255) attTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAg < 2:223448/100‑1 (MQ=255) tttCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACTCATGCCTCGCCGATGCTAACAgc > 1:2552136/1‑100 (MQ=255) tttCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAgc > 2:2949432/1‑100 (MQ=255) tttCGCGGTGATGCCAGACGCGCCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAgc < 1:2290289/100‑1 (MQ=255) tCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAgcgc < 1:3433513/100‑1 (MQ=255) cgcgGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCt < 2:2284435/100‑1 (MQ=255) gcgGTGATGCCAGACGCGTCTTCAGAGTAAGCCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTc < 2:351893/100‑1 (MQ=255) cgGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTcc > 2:3167381/1‑100 (MQ=255) gTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCcca > 2:1394005/1‑100 (MQ=255) aTGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCccacca > 2:346080/1‑100 (MQ=255) tGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAg > 1:2989065/1‑100 (MQ=255) tGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAg > 1:2696400/1‑100 (MQ=255) tGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAg < 1:2925622/100‑1 (MQ=255) tGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAg > 1:2387666/1‑100 (MQ=255) ccAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCa > 2:179198/1‑100 (MQ=255) ccAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCa > 2:2770889/1‑100 (MQ=255) gACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATaa < 2:3380370/100‑1 (MQ=255) gACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCAACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTTCCACCAGCATaa > 1:764991/1‑100 (MQ=255) cgcgTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaac > 2:597028/1‑100 (MQ=255) cgcgTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaac < 2:2690513/100‑1 (MQ=255) cgcgTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaac > 1:1569578/1‑100 (MQ=255) cgcgTCGTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaac < 1:2627206/100‑1 (MQ=255) gcgTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaaca < 1:2009305/100‑1 (MQ=255) gcgTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaaca < 2:3612996/100‑1 (MQ=255) cgTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaacaa > 2:2185828/1‑100 (MQ=255) cgTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaacaa > 2:1865488/1‑100 (MQ=255) cgTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAaacaa > 2:3059033/1‑100 (MQ=255) tCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACg < 1:1368611/100‑1 (MQ=255) cTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCTGTCTTTT‑TTTTTCTCGCATGCCTCGCCGCTGCTAACAGCGCTCCCACCAGCATAAACAACGa > 1:1969367/1‑100 (MQ=38) ttCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACg > 1:3312543/1‑98 (MQ=255) cAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGcc < 2:923771/100‑1 (MQ=255) cAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGcc < 2:1105625/100‑1 (MQ=255) agagTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCg < 1:1908343/100‑1 (MQ=255) gagTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGa > 1:1846724/1‑100 (MQ=255) gagTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGa > 2:2529028/1‑100 (MQ=255) aataatGTCGGATGCGGCGTAAACGCCTTATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGa < 1:1366543‑M1/94‑1 (MQ=255) attAAGTCGGATAAGCCTTTTAGGCCCCATCCGATATTA‑TCTTTCACGCATGTCTCGCCGCAGCTAACAGCGCTCCCACCAGCATAAACAACGAg < 1:653117/93‑1 (MQ=255) gTAATTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGa < 2:458225/98‑1 (MQ=255) atgtcggatgcggcgtaaacgccttatccgacATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAAt > 2:208413‑M2/33‑100 (MQ=255) atgtcggatgcggcgtaaacgccttatccgacATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAAt > 1:158655‑M2/33‑100 (MQ=255) aGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATc > 2:2990313/1‑100 (MQ=255) TCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCtt > 1:1510434‑M1/1‑100 (MQ=255) cGGATAAGGCGTTTACGCCGCATCCGCCATTA‑CTTTTCACGCTTCCCCCGCCGATGCTAACAGCGCTCCCACCAGCCTAACCCCCGCGCCGAAAATCTTa < 1:2592916/100‑1 (MQ=25) ATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTc > 2:2063404‑M1/1‑100 (MQ=255) ATAAGGCGTTTACGCCGCATCCGACATTA‑TTTCTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTc > 1:874832‑M1/1‑100 (MQ=255) aaGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAg < 1:2516336/100‑1 (MQ=255) aaGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAg < 2:2338881/100‑1 (MQ=255) ggCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAgcg > 2:250653/1‑100 (MQ=255) ggCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAgcg > 2:2305984/1‑100 (MQ=255) gTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCt > 2:778915/1‑100 (MQ=255) tttACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCtt < 2:3265343/100‑1 (MQ=255) tACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCTTCa < 1:1734245/100‑1 (MQ=255) aCGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCTTCAt > 2:1983898/1‑100 (MQ=255) cgccgcATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCTTCATc > 2:292011/1‑100 (MQ=255) gccgcATCCGACATTATTTTTTCACGCCTGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTAGTCAGCCCCtcc > 1:193965/1‑95 (MQ=255) gccgcATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCTTCATc < 1:3589231/99‑1 (MQ=255) gccgcATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCTTCATCt > 2:1492303/1‑100 (MQ=255) cgacATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCTTCATCTGCTTTGGt < 2:1719842‑M2/96‑1 (MQ=255) acATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCTTCATCTGCTTTGGTcc < 2:861778‑M2/98‑1 (MQ=255) atta‑ttTTTCACGCATGCCTCGCCGATGCTAACAGCGCTTCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCTTCATCTGCTTTGGTCCtt > 1:1169582/1‑100 (MQ=255) atta‑ttTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACGACGAGCCGAAAATCTTATTCAGCGCCTTCATCTGCTTTGGTCCtt < 2:2853507/100‑1 (MQ=255) | GGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGATGCCAGACGCGTCTTCAGAGTAAGTCGGATAAGGCGTTTACGCCGCATCCGACATTA‑TTTTTCACGCATGCCTCGCCGATGCTAACAGCGCTCCCACCAGCATAAACAACGAGCCGAAAATCTTATTCAGCGCCTTCATCTGCTTTGGTCCTT > NC_000913/4008332‑4008530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |