New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4168377 =3 (0.020)4 (0.030) 4/168 NT 58.6% noncoding (6/76 nt) gltT tRNA‑Glu
?NC_000913 4209763 = NA (NA)intergenic (+75/‑11) rrsE/gltV 16S ribosomal RNA of rrnE operon/tRNA‑Glu

Only 100 of 136 total aligned reads displayed.

AACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAT  >  NC_000913/4209664‑4209833
                                                                                                   |                                                                      
aaCCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGc                                                                        <  1:2568988/100‑1 (MQ=33)
aaCCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGc                                                                        <  2:92880/100‑1 (MQ=33)
  ccTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAg                                                                      <  2:890303/100‑1 (MQ=33)
  ccTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAg                                                                      <  2:226893/100‑1 (MQ=33)
  ccTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAg                                                                      <  2:1961907/100‑1 (MQ=33)
   cTGCGGTTGGATCACCTCCTTACCATAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCa                                                                       <  1:358914/98‑1 (MQ=17)
    tGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGAc                                                                    >  2:2330283/1‑100 (MQ=33)
     ggggTTGGAGTCCCTTCTTACGTTAAGGGAGGGTTCTTTGCCGTGCTCAGGGAGTTTGTCTGATAGAAAGTGAAAAGCTAGGCGTCTTGCGAAGCAg                                                                      <  1:3520487/95‑1 (MQ=2)
     gCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACt                                                                   <  2:2358119/100‑1 (MQ=33)
     gCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACt                                                                   >  2:1547318/1‑100 (MQ=33)
     gCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACt                                                                   <  1:604248/100‑1 (MQ=32)
     gCGGCTGGATCACCACCATACATTAACGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCAGATAGAAAATGAAAAGCAAGGGGTCTTGCGAAGCa                                                                       <  1:3461742/96‑1 (MQ=11)
         ttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATa                                                               <  2:293575/100‑1 (MQ=33)
         ttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATa                                                               <  1:2106402/100‑1 (MQ=33)
         ttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATa                                                               <  2:1928834/100‑1 (MQ=33)
         ttGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATa                                                               <  2:2060845/100‑1 (MQ=33)
          tGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATAc                                                              >  2:359529/1‑100 (MQ=33)
           ggATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACg                                                             >  2:2835559/1‑100 (MQ=33)
            gATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGt                                                            >  1:2143870/1‑100 (MQ=32)
            gATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATGGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGt                                                            >  1:543804/1‑100 (MQ=17)
              tctcctcctTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTcc                                                          <  1:651437/97‑1 (MQ=18)
              tCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTcc                                                          <  2:3325221/100‑1 (MQ=33)
               cACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTccc                                                         >  1:2903772/1‑100 (MQ=33)
               cACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTccc                                                         <  1:56087/100‑1 (MQ=33)
               cACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATCGTCTGATAGAAAGTGAAACGCAAGGCGTCTTGCGAAGCAGACTGATACGTccc                                                         <  1:2310485/100‑1 (MQ=12)
                aCCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTcccc                                                        >  2:3107055/1‑100 (MQ=32)
                aCCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTcccc                                                        <  2:3044915/100‑1 (MQ=33)
                 cctcctTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTccaga                                                       >  2:651442/1‑97 (MQ=18)
                 cctcctTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCt                                                       >  1:828815/1‑100 (MQ=33)
                  ntcctTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCtt                                                      >  1:2915922/2‑100 (MQ=18)
                   tcctTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTc                                                     >  2:3208581/1‑100 (MQ=33)
                    ccttaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCg                                                    <  2:2699192/100‑1 (MQ=33)
                    ccttaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCg                                                    >  1:375846/1‑100 (MQ=33)
                     cttaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGt                                                   <  1:3419907/100‑1 (MQ=33)
                     cttaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAAATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGt                                                   >  1:1970817/1‑100 (MQ=18)
                      ttaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTc                                                  <  2:828820/100‑1 (MQ=33)
                       taccttaAAGAAGCGTTTTTTGCAGTGCTCAGACAGATTGTTTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATATGTCCCCTTCGTCt                                                 <  1:863490/100‑1 (MQ=11)
                       taccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGGAAAGCAAGGCGGCTTGCGAAGCAGACTGATACGTCCCCttcttc                                                  >  2:3683994/1‑99 (MQ=255)
                       taccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCt                                                 <  1:1288947/100‑1 (MQ=33)
                         ccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTag                                               >  2:1788309/1‑100 (MQ=33)
                          cttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTaga                                              >  2:57667/1‑100 (MQ=33)
                           ttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTagag                                             >  1:1424374/1‑100 (MQ=33)
                           ttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTagag                                             >  2:1296880/1‑100 (MQ=33)
                            taAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTagagn                                            <  1:3533739/100‑2 (MQ=17)
                            taAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAgg                                            >  2:40821/1‑100 (MQ=33)
                                  agCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAgg                                      <  2:2461407/100‑1 (MQ=33)
                                  agCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAgg                                      >  1:2748956/1‑100 (MQ=33)
                                    cGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGac                                    >  1:613723/1‑100 (MQ=32)
                                    cGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGac                                    <  1:854534/100‑1 (MQ=33)
                                    cGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGac                                    <  2:2747208/100‑1 (MQ=33)
                                     gTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGaca                                   >  1:2130694/1‑100 (MQ=33)
                                     gTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGaca                                   >  2:2170287/1‑100 (MQ=33)
                                     gTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGaca                                   >  2:90755/1‑100 (MQ=33)
                                         tttGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGc                               >  1:932358/1‑100 (MQ=33)
                                          ttGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGcc                              >  2:474306/1‑100 (MQ=32)
                                          ttGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGcc                              >  1:2246142/1‑100 (MQ=32)
                                          ttGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGcc                              <  2:3014671/100‑1 (MQ=33)
                                           tGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGccc                             >  2:277821/1‑100 (MQ=33)
                                            gCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCt                            >  2:1715359/1‑100 (MQ=33)
                                             cAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGACACGTCACCTTCGTCTAGAGGCCCAGGACACCGCCCtt                           >  1:2502234/1‑100 (MQ=16)
                                               gTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTc                         <  2:129067/100‑1 (MQ=33)
                                               gTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTc                         <  2:1864588/100‑1 (MQ=33)
                                               gTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTc                         >  1:1726848/1‑100 (MQ=33)
                                               gTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTc                         <  2:2080179/100‑1 (MQ=33)
                                                tGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTc                         <  1:2805504/99‑1 (MQ=32)
                                                 gCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAc                       >  1:2557434/1‑100 (MQ=32)
                                                 gCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAc                       <  2:2738613/100‑1 (MQ=33)
                                                  cTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcg                      <  2:2130707/100‑1 (MQ=33)
                                                  cTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcg                      >  2:3151861/1‑100 (MQ=33)
                                                    cacacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGCAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                    >  1:3177509/1‑100 (MQ=18)
                                                    cacacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                    >  2:56421/1‑100 (MQ=33)
                                                    cacacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                    >  1:818504/1‑100 (MQ=33)
                                                    cacacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                    >  2:1183106/1‑100 (MQ=33)
                                                     acacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggcg                   >  2:1113873/1‑100 (MQ=33)
                                                      cacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggcgg                  <  2:39082/100‑1 (MQ=33)
                                                      cacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCACTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggcgg                  >  1:2452937/1‑100 (MQ=17)
                                                        caGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTTGCGAAGCAGACTGAGACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCAcggc                    <  2:3685713/96‑1 (MQ=12)
                                                        caGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTa                <  1:1700205/100‑1 (MQ=33)
                                                        caGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTa                <  2:3620710/100‑1 (MQ=33)
                                                         aGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTaa               <  1:169750/100‑1 (MQ=33)
                                                          gATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAAc              <  2:3105061/100‑1 (MQ=33)
                                                             ccgatcttAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAgg           <  1:1461158/93‑1 (MQ=255)
                                                              gTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAggg          >  2:803548/1‑100 (MQ=33)
                                                              gTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAggg          >  1:199366/1‑100 (MQ=33)
                                                                cTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt        >  1:387712/1‑100 (MQ=33)
                                                                cTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt        <  1:1884884/100‑1 (MQ=33)
                                                                cTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt        >  1:1100671/1‑100 (MQ=33)
                                                                 tGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGtt       >  2:254602/1‑100 (MQ=33)
                                                                 tGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGtt       >  1:1459519/1‑100 (MQ=33)
                                                                  gATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc      <  1:1113867/100‑1 (MQ=33)
                                                                  gATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc      <  1:777284/100‑1 (MQ=33)
                                                                  gATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc      >  1:223045/1‑100 (MQ=33)
                                                                   aTAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCg     <  1:3354760/100‑1 (MQ=33)
                                                                    tAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGa    >  2:1269165/1‑100 (MQ=32)
                                                                    tAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGa    >  1:2456401/1‑100 (MQ=32)
                                                                     aGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGan   <  2:2915943/100‑2 (MQ=17)
                                                                     aGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCgta   <  2:2514574/100‑3 (MQ=17)
                                                                      gAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGaa   >  2:1519039/1‑99 (MQ=31)
                                                                      gAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAt  >  2:3515458/1‑100 (MQ=31)
                                                                      gAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAt  <  1:3378564/100‑1 (MQ=31)
                                                                                                   |                                                                      
AACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAT  >  NC_000913/4209664‑4209833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.