New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4240156NA (NA)10 (0.080) 6/164 NT NA intergenic (‑101/‑169) yjbT/psiE putative periplasmic protein/phosphate starvation inducible protein
?NC_000913 = 4240189 NA (NA)noncoding (33/37 nt) REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 207 total aligned reads displayed.

TTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTT  >  NC_000913/4240090‑4240288
                                                                                                   |                                                                                                   
ttGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGC                                                                                                     >  2:1301427‑M2/1‑100 (MQ=255)
 ttccgatctcTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                                                    <  2:1007778/91‑1 (MQ=255)
  gCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCt                                                                                                   >  2:74608/1‑100 (MQ=255)
  gCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCt                                                                                                   >  2:3241632/1‑100 (MQ=255)
      gtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACgg                                                                                               >  2:858573/1‑100 (MQ=255)
      gtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACgg                                                                                               <  2:1996746/100‑1 (MQ=255)
        ggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggt                                                                                             <  1:1328049/100‑1 (MQ=255)
        ggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggt                                                                                             >  2:2956247/1‑100 (MQ=255)
          cTGGGAATCACCTGAATGGGTGATTTTTTTTTTTTTTTTTTTGGTGCGGTTTGTCTTGCCGGATTTTTCGTCAGGCGCGGCTTATCCGGCCTACGtgta                                                                                            >  1:3641044/1‑99 (MQ=255)
          cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGccagatcggaa                                                                                           >  1:1007772/1‑91 (MQ=255)
          cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggta                                                                                            <  1:212427/99‑1 (MQ=255)
           tGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtagg                                                                                          <  1:1600336/100‑1 (MQ=255)
             ggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggta                                                                                        <  2:3209392/100‑1 (MQ=255)
             ggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggta                                                                                        <  1:2393884/100‑1 (MQ=255)
              gAATCACCTGAATGGGTGATTTTTGAATTTTTTTTTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGtat                                                                                       >  1:2995324/1‑100 (MQ=255)
               aaTCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGtata                                                                                      <  2:3433112/100‑1 (MQ=255)
               aaTCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGtata                                                                                      <  2:1547971/100‑1 (MQ=255)
                aTCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTatat                                                                                     >  1:2869239/1‑100 (MQ=255)
                 tCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATc                                                                                    <  1:1975216/100‑1 (MQ=255)
                  cACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATcc                                                                                   <  2:421565/100‑1 (MQ=255)
                  cACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATcc                                                                                   >  1:3508584/1‑100 (MQ=255)
                   aCCTGAATGGGTGATTTTTTTATTTTCTTCTTTGGTGCGGTTTGTCTTGCCTGATTCTCCGCCAGGCGCGGCTTCTCCGGCCTTCGggtccatacatc                                                                                    >  1:312264/1‑89 (MQ=255)
                    ccTGAATGGGTGATTTTTTTTTTTTTTTTTTTGGTGCGGTTTGTCTTGCCGTATTTTTTGGCAGGCGGGGCTTATCCGGCCTCCTGGTAGGTATATcc                                                                                   >  1:2188801/1‑98 (MQ=255)
                    ccTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCgg                                                                                 >  1:663920/1‑100 (MQ=255)
                     cTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGc                                                                                <  2:2896924/100‑1 (MQ=255)
                       gAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCtt                                                                              >  2:932297/1‑100 (MQ=255)
                        aaTGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCttt                                                                             >  2:2229904/1‑100 (MQ=255)
                          tGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtgg                                                                           <  2:2658889/100‑1 (MQ=255)
                             gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                                                        <  2:388891/100‑1 (MQ=255)
                             gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                                                        <  2:665848/100‑1 (MQ=255)
                              tGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGa                                                                       <  2:2746108/100‑1 (MQ=255)
                               gATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAg                                                                      >  1:2457640/1‑100 (MQ=255)
                               gATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAg                                                                      <  1:2042461/100‑1 (MQ=255)
                                ccgatctaaTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAgg                                                                     <  2:1293548/93‑1 (MQ=255)
                                  ttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcg                                                                   <  1:860586/100‑1 (MQ=255)
                                      gAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGGAGGTATATCCGGCTTTGGTGGAGGCGCGCt                                                               >  1:2716012/1‑100 (MQ=255)
                                       aaTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAggagatcgg                                                              >  1:1293542/1‑93 (MQ=255)
                                        aTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGCTAGGTATATCCGGCTTTGGTGGAGGCGCGCTcc                                                             <  1:2447073/100‑1 (MQ=255)
                                             cGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATc                                                        >  1:37494/1‑100 (MQ=255)
                                                cTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                                                     <  1:1735107/100‑1 (MQ=255)
                                                cTTTGGTGCGGTTTGTCTTGCCGGATGCGACGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                                                     <  1:2229891/100‑1 (MQ=255)
                                                  ttGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGt                                                   <  1:2332355/100‑1 (MQ=255)
                                                   tGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGGATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAgg                                                    <  2:1654284/98‑1 (MQ=255)
                                                    ggTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                                                 >  1:1128890/1‑100 (MQ=255)
                                                     gTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                                                 <  2:2210997/99‑1 (MQ=255)
                                                     gTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGa                                                >  2:611179/1‑100 (MQ=255)
                                                      tGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGaa                                               >  2:34896/1‑100 (MQ=255)
                                                          gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaa                                           <  2:887140/100‑1 (MQ=255)
                                                             tGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACa                                        <  2:803043/100‑1 (MQ=255)
                                                             tGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACa                                        >  2:1607024/1‑100 (MQ=255)
                                                              gTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccacc                                       <  1:3605823‑M2/100‑63 (MQ=255)
                                                              gTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccacc                                       <  1:852304‑M2/100‑63 (MQ=255)
                                                               tCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATa                                      >  2:2628907/1‑100 (MQ=255)
                                                                cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccag                                     <  2:1919805‑M2/100‑65 (MQ=255)
                                                                cTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATac                                     >  2:2104028/1‑100 (MQ=255)
                                                                 ttGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagc                                    <  2:861229‑M2/100‑66 (MQ=255)
                                                                 ttGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATaca                                    >  1:291233/1‑100 (MQ=255)
                                                                  tGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagca                                   <  2:1181805‑M2/100‑67 (MQ=255)
                                                                  tGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagca                                   <  1:1793444‑M2/100‑67 (MQ=255)
                                                                  tGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATacac                                   <  2:1572918/100‑1 (MQ=255)
                                                                   gCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATAcaca                                  >  1:3189332/1‑100 (MQ=255)
                                                                    ccGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACaa                                 >  1:3486777/1‑100 (MQ=255)
                                                                    ccGGATGCGCCGCCAGGCGC‑‑‑‑‑ATCCGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaatgcgcg                            <  2:2557703‑M2/100‑74 (MQ=255)
                                                                    ccGGATGCGCCGCAAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACaa                                 >  2:2513999/1‑100 (MQ=255)
                                                                     cGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACaaa                                >  1:1803085/1‑100 (MQ=255)
                                                                     cGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACaaa                                >  2:1233115/1‑100 (MQ=255)
                                                                        aTGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACaaaaaa                             <  1:2686135/100‑1 (MQ=255)
                                                                           cgccgcCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAatat                          >  2:2882157/1‑100 (MQ=255)
                                                                            gccgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAAtata                         >  2:2768246/1‑100 (MQ=255)
                                                                             cctccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAAtata                         <  1:2507014/96‑1 (MQ=255)
                                                                             ccgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAg                        >  1:2852854/1‑100 (MQ=255)
                                                                              cgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAg                        <  1:2441621/99‑1 (MQ=255)
                                                                              cgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAg                        <  1:1176334/99‑1 (MQ=255)
                                                                              cgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGa                       >  2:1773214/1‑100 (MQ=255)
                                                                              cgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGa                       >  1:1410189/1‑100 (MQ=255)
                                                                              cgccAGGAGCGGCGTATCCGGCCTACGGGTAGGTATAGCCGGATTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACAGACACAAAAAATATAGa                       <  2:3705360/100‑1 (MQ=255)
                                                                                 cAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGAtct                    >  1:226336/1‑100 (MQ=255)
                                                                                 cAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGAtct                    <  2:1354095/100‑1 (MQ=255)
                                                                                 cAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGAtc                     <  1:88807/99‑1 (MQ=255)
                                                                                    gcgcGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAATCATACACAAAAAATATAGATCTCCg                 <  1:57531/100‑1 (MQ=255)
                                                                                     cgcgGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGt                >  1:1061408/1‑100 (MQ=255)
                                                                                      gcgGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTc               <  2:3008995/100‑1 (MQ=255)
                                                                                      gcgGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTc               >  2:1191907/1‑100 (MQ=255)
                                                                                           ttATCGGGCCTACGGGTAGGTATATCCGGTTTTGGTGGAGGCGCGCGCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACAtt          <  1:505947/100‑1 (MQ=255)
                                                                                           ttATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACAtt          <  2:1363076/100‑1 (MQ=255)
                                                                                               ccGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaatgcgcgaaaaatcgacaatgttcctctg      >  1:2658874‑M2/1‑5 (MQ=255)
                                                                                               ccGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaatgcgcgaaaaatcgacaatgttcctctg      >  1:3441198‑M2/1‑5 (MQ=255)
                                                                                               ccGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaatgcgcgaaaaatcgacaatgttcctctg      >  1:764236‑M2/1‑5 (MQ=255)
                                                                                               ccGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTg      <  1:395425/100‑1 (MQ=255)
                                                                                               ccGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTg      <  2:3641073/100‑1 (MQ=255)
                                                                                               ccGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTg      >  2:1130557/1‑100 (MQ=255)
                                                                                                cGGCaagacaaaccgcaccaaagccggtaattcaaaaatcacccattcaggtgattcccagccaccagcaatgcgcgaaaaatcgacaatgttcctctgg     <  2:1951361‑M2/100‑97 (MQ=255)
                                                                                                cGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGc     >  2:2374752/1‑100 (MQ=255)
                                                                                                 ggCaagacaaaccgcagcaaagccggtaattcaaaaatcacccattcaggtgattcccagcgaccagcaatgcgcgaaaaatcgacaatgttcctctgg     >  2:1744717‑M2/1‑3 (MQ=255)
                                                                                                 ggCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCg    <  2:2017555/100‑1 (MQ=255)
                                                                                                 ggCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCg    <  1:1260046/100‑1 (MQ=255)
                                                                                                 ggCCAACGGGTAGGTATATCCGGCTTTGAAGGAGGCGCGCTTCAAATCCAGGTTGAAAAAAAAATAAAAAAAAAATATAGATCTCCGTCACATTTTTg      <  1:1540593/98‑1 (MQ=255)
                                                                                                  gCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCg    <  1:1924881/99‑1 (MQ=255)
                                                                                                  gCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGt   <  2:2250445/100‑1 (MQ=255)
                                                                                                  gCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGt   <  2:2441830/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTT  >  NC_000913/4240090‑4240288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.