New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2393131 =NA (NA)17 (0.140) 12/164 NT NA noncoding (1/36 nt) REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2393163 = NA (NA)noncoding (33/36 nt) REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 155 total aligned reads displayed.

AGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGATGC  >  NC_000913/2393064‑2393261
                                                                                                   |                                                                                                  
aGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAcc                                                                                                    <  2:2999306/100‑1 (MQ=255)
aGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAcc                                                                                                    >  2:1344435/1‑100 (MQ=255)
  tCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                                                   <  1:138892/99‑1 (MQ=255)
  tCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTa                                                                                                  <  1:105671/100‑1 (MQ=255)
  tCCCGTCAGGACCGGATTGTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                                                   >  1:1681197/1‑99 (MQ=255)
   cccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTAc                                                                                                 >  1:758412/1‑100 (MQ=255)
     gttgatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagtGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGt                                                                                               >  2:220832‑M1/63‑100 (MQ=255)
     cGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGt                                                                                               >  2:2592799/1‑100 (MQ=255)
      gTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGtt                                                                                              >  2:453592/1‑100 (MQ=255)
        gatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagtGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                                                            >  2:3475752‑M1/60‑100 (MQ=255)
        gatggtactgcgttgagttaaggattgtgggattgcccctgggcagataagaacgtagtGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                                                            >  1:545270‑M1/60‑100 (MQ=255)
        gatgggactgcgttgagttaaggattgtgggattgcccctgggcagataagaacgtagtGTCGGGTGGACCGCGAAGGCGGCTTATCCGACCTACGtt                                                                                              >  1:1722280‑M1/60‑98 (MQ=255)
        cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                                                            <  2:773835/100‑1 (MQ=255)
         aGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCtt                                                                                           <  2:893454/100‑1 (MQ=255)
         aGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCtt                                                                                           <  1:170142/100‑1 (MQ=255)
          tggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagtGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                                                          >  2:2963777‑M1/58‑100 (MQ=255)
          ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                                                          <  2:1472555/100‑1 (MQ=255)
          ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                                                          <  1:2878157/100‑1 (MQ=255)
            aCCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtata                                                                                        <  1:878268/100‑1 (MQ=255)
             ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat                                                                                       >  1:1772577/1‑100 (MQ=255)
             ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat                                                                                       >  2:1807246/1‑100 (MQ=255)
              cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                                                      <  1:2121448/100‑1 (MQ=255)
              cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                                                      <  2:3547643/100‑1 (MQ=255)
              cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                                                      <  1:2745815/100‑1 (MQ=255)
               ggATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGc                                                                                     >  2:1755245/1‑100 (MQ=255)
               ggATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGc                                                                                     <  1:3347311/100‑1 (MQ=255)
                gATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGcc                                                                                    <  2:103936/100‑1 (MQ=255)
                ctgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGcc                                                                                    >  1:1116580‑M1/52‑100 (MQ=255)
                 aTTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatatagat                                                                                   >  1:421786/1‑96 (MQ=255)
                    ttCAACGAATTCTCACGACAGAAAATTCTCTTCGTACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgg                                                                                <  1:36946/100‑1 (MQ=255)
                     ctaaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAggg                                                                               <  1:3128870/98‑1 (MQ=255)
                      cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                                                              <  2:575135/100‑1 (MQ=255)
                      cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                                                              >  1:3613960/1‑100 (MQ=255)
                      cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                                                              <  2:2666467/100‑1 (MQ=255)
                      cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAggga                                                                              >  1:2694741/1‑99 (MQ=255)
                       aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggag                                                                             >  2:3128892/1‑98 (MQ=255)
                       aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                                                                             <  2:295558/100‑1 (MQ=255)
                         cGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCaa                                                                           <  2:1423442/100‑1 (MQ=255)
                            aTTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATcc                                                                        <  2:3377878/100‑1 (MQ=255)
                               ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                                                     >  2:2013464/1‑100 (MQ=255)
                               ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                                                     >  1:2742970/1‑100 (MQ=255)
                               ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATACGACCTACGTTCTTATATGCTCAGGGGCAATCCca                                                                      >  2:2089708/1‑99 (MQ=255)
                                 cACGACAGAAAATTCTCTTCGGACAGGGGGTAGTGGCGGATGGAACGAGAAGGCGGTTTATCCGACATACGTTCTTATATGCACAGGGGAAATCCcaca                                                                    >  1:1175056/1‑99 (MQ=255)
                                    gACAGAAAATTCTCTTCGTACTGGGGTTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCCACCTACGTTCTTATAGGCCCAGGGGCAATCCCACAATcc                                                                <  1:1183573/100‑1 (MQ=255)
                                    gACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATcc                                                                <  2:1699004/100‑1 (MQ=255)
                                       aGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTa                                                             <  1:948266/100‑1 (MQ=255)
                                         aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                           <  2:2377069/100‑1 (MQ=255)
                                         aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                           <  2:3671342/100‑1 (MQ=255)
                                         aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAAGCCTTAAc                                                           <  1:29322/100‑1 (MQ=255)
                                           aaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTc                                                         <  2:2742986/100‑1 (MQ=255)
                                                tctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGc                                                    >  2:731802/1‑100 (MQ=255)
                                                tctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGc                                                    <  1:1762648/100‑1 (MQ=255)
                                                 ctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCa                                                   >  1:748744/1‑100 (MQ=255)
                                                  ggcatataagaacgtaggtcggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAg                                                  >  1:1116580‑M2/50‑100 (MQ=255)
                                                   tgggACTGGGGGTAGTGTGGGATGCACCGCGAAGGCGGCGTAGCCGACGTACGTTGTTAAATGCGCAGGGGCAATCCCACAATCCTTAACTCAACGccg                                                  >  1:971432/3‑97 (MQ=255)
                                                   tCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGt                                                 <  1:1344429/100‑1 (MQ=255)
                                                    cGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTa                                                >  1:2717740/1‑100 (MQ=255)
                                                        cTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCAt                                            <  2:3594084/100‑1 (MQ=255)
                                                        cTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCAt                                            >  1:3292490/1‑100 (MQ=255)
                                                        aagaacgtaggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCAt                                            >  2:1492420‑M2/44‑100 (MQ=255)
                                                         agaacgtaggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATCTGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATc                                           >  1:545270‑M2/43‑100 (MQ=255)
                                                          gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa                                          >  1:613006/1‑100 (MQ=255)
                                                           aacgtaggtcggataagccgccttcgcggtccacccgacaCTACGTTCTTATCTGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTCCCATc                                           >  1:1722280‑M2/41‑98 (MQ=255)
                                                            gggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTAGCATCAAc                                        <  2:1943733/100‑1 (MQ=255)
                                                            gggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAAc                                        <  2:1185364/100‑1 (MQ=255)
                                                            gggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAAc                                        <  2:2270011/100‑1 (MQ=255)
                                                            acgtaggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAAc                                        >  2:220832‑M2/40‑100 (MQ=255)
                                                             ggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACa                                       >  1:2181423/1‑100 (MQ=255)
                                                             ggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGGTCTTATATGCGCAGGGGCAATCCCACAATCCTTAACTCAACGAAGTACGAACaa                                         >  1:3490176/1‑98 (MQ=255)
                                                               tAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGt                                     <  2:393819/100‑1 (MQ=255)
                                                                aGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTg                                    >  2:2718771/1‑100 (MQ=255)
                                                                  tgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGcc                                  <  1:1442088/100‑1 (MQ=255)
                                                                   gtcggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCa                                 >  1:375547‑M2/33‑100 (MQ=255)
                                                                   GTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCa                                 <  2:1104336‑M1/100‑1 (MQ=255)
                                                                    cggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAg                                >  2:383320‑M2/32‑100 (MQ=255)
                                                                     CGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGc                               >  2:1594035‑M1/1‑100 (MQ=255)
                                                                      ggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACGATCAACAGCGCCAGca                              >  1:3327806‑M2/30‑100 (MQ=255)
                                                                      ggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGca                              >  2:794947‑M2/30‑100 (MQ=255)
                                                                      ggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGca                              >  2:3597787‑M2/30‑100 (MQ=255)
                                                                      GGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGca                              <  2:44849‑M1/100‑1 (MQ=255)
                                                                      GGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGca                              <  2:3244152‑M1/100‑1 (MQ=255)
                                                                        ATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcacc                            >  1:645875‑M1/1‑100 (MQ=255)
                                                                        ATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcacc                            >  1:3184162‑M1/1‑100 (MQ=255)
                                                                        ATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcacc                            >  1:1861826‑M1/1‑100 (MQ=255)
                                                                         taagccgccttcccggtgcatccgacCTACGTTCTTATATGCCCAGTGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcacca                           >  2:2433751‑M2/27‑100 (MQ=255)
                                                                         TGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcacca                           <  1:1022486‑M1/100‑1 (MQ=255)
                                                                          gCACCGCGAAGGCGGCTTATCCGACTTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcaccac                          <  1:1585084/100‑1 (MQ=255)
                                                                          gCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcaccac                          <  2:318526/100‑1 (MQ=255)
                                                                           cACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACg                         >  2:137787/1‑100 (MQ=255)
                                                                           cACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACg                         <  2:1201357/100‑1 (MQ=255)
                                                                            aCCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGa                        >  2:3279028/1‑100 (MQ=255)
                                                                              gccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGAcc                      <  1:1492414‑M2/79‑1 (MQ=255)
                                                                               gcgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCg                     >  1:2302379/1‑100 (MQ=255)
                                                                                cgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGc                    <  1:820290/100‑1 (MQ=255)
                                                                                 gAAGCCGGCTTATCCGAACTACGTTCTTATATCCACAGGGGCAATCCCACATTCCTCAACACAACGCAGTACCATCAACATTGCCAGcacc                            <  1:1863272/91‑1 (MQ=255)
                                                                                  aaGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCAc                  <  1:3667412/100‑1 (MQ=255)
                                                                                  aaGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCAc                  >  2:2038899/1‑100 (MQ=255)
                                                                                       ggcTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCCTCAACAGTGCCAGCACCACGACCGCACCGATg             <  2:3511092/100‑1 (MQ=255)
                                                                                        gcTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGc            >  2:1074442/1‑100 (MQ=255)
                                                                                        gcTTATCCGACCTACGTTCGTATGTGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGc            >  1:3468193/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
AGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGATGC  >  NC_000913/2393064‑2393261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.