| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2944997 | NA (NA) | 11 (0.100) | 7/162 | NT | NA | noncoding (4/34 nt) | REP205 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP205 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 2945027 | NA (NA) | noncoding (34/34 nt) | REP205 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP205 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
GGGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcggat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2944898‑2944997‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGTCGGATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCGTGAG < NC_000913/2945027‑2944922 GGGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGG < 2:2996196/100‑1GGGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGG < 2:789888/100‑1 GGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGG < 2:2934251/100‑1 GGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGG < 2:1143503/100‑1 nATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGT > 2:2021518/2‑100 GATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGG > 1:2493252/1‑98 TTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGTTTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCG < 2:492372/100‑1 TACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGG < 1:2033611/100‑1 CGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGAT > 2:1855910/1‑100 CACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATGAGACGCGAACGTCTTATC < 1:2410709/100‑1 ACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATGAGACGCGAACGTCTTATCC < 1:865630/100‑1 ACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGCGAACGTCTTATCC < 1:1940576/100‑1 GCCAGGGTTTAAATGCGTTAAGCGAGGCGATGATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATGAGACGCGAACGTCTTATCCGACCC < 2:3200036/100‑1 GCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATGGCGGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATGAGACGCGAACGTCTTATCCGACCC < 1:792372/100‑1 CCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATGAGACGCGAACGTCTTATCCGACCCG < 2:914321/100‑1 CCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATGAGACGCGAACGTCTTATCCGACCCG < 1:3148443/100‑1 CAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATGAGACGCGAACGTCTTATCCGACCCGG < 1:1519603/100‑1 CAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATGAGACGCGAACGTCTTATCCGACCCG < 1:2459962/99‑1 AGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATGAGACGCGAACGTCTTATCCGCCCCGGT < 1:3304684/100‑1 CGCTGCGACGAAGCAGGTTTAAGCACAGAACCAGGTCGGATGAGACGCGAACGTCTTATCCGCCCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGAT < 2:2953802/100‑1 GGGTCGGATAAGACGTTCGCGTCTCATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGC > 2:850947/1‑100 GGTCGGATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCT > 2:2423600/1‑100 GTCGGATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTG > 1:1403948/1‑100 GTCGGATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTG > 2:947496/1‑100 GTCGGATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTG > 2:2113579/1‑100 GTCGGATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTG > 1:2646206/1‑100 CGGATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCG > 2:2541797/1‑100 CGGATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCG > 1:3411406/1‑100 CGGATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCG < 2:638569/100‑1 GATGAGACGCGAACGTCTTATCCGGCCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCGTG < 1:83681/100‑1 GATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCGTG < 2:2618526/100‑1 GATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCGTG < 2:1601709/100‑1 ATGAGACGCTAACGTCTTATCCGACCCGGTTCTTTTCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCGTG < 1:1401587/99‑1 TGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCGTGAG < 2:658493/100‑1 TGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCGTGAG > 1:2442573/1‑100 TGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCGTGAG > 1:2383207/1‑100 GGGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcggat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2944898‑2944997‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGTCGGATGAGACGCGAACGTCTTATCCGACCCGGTTCTGTGCTTAAACCTGCTTCGTCGCAGCGATAATCGCCTCGCTTAACGCATTTAACCCCTGGCTGCGTGAG < NC_000913/2945027‑2944922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |