New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2944997NA (NA)11 (0.100) 7/162 NT NA noncoding (4/34 nt) REP205 (repetitive extragenic palindromic) element; contains 1 REP sequences REP205 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 2945027 NA (NA)noncoding (34/34 nt) REP205 (repetitive extragenic palindromic) element; contains 1 REP sequences REP205 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 135 total aligned reads displayed.

GGGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGAAACCGCAACAAAC  >  NC_000913/2944898‑2945096
                                                                                                   |                                                                                                   
gggATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGG                                                                                                     <  2:2996196‑M1/100‑1 (MQ=255)
 ggATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGg                                                                                                    <  2:2934251‑M1/100‑2 (MQ=255)
 ggATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGg                                                                                                    <  2:1143503‑M1/100‑2 (MQ=255)
  natTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgt                                                                                                   >  2:2021518‑M1/2‑98 (MQ=255)
  gATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGG                                                                                                     >  1:2493252‑M1/1‑98 (MQ=255)
     tACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcgg                                                                                                <  1:2033611‑M1/100‑6 (MQ=255)
       cGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcggat                                                                                              >  2:1855910‑M1/1‑93 (MQ=255)
        gTGCGCAGCTTAGCGCCTCACGCGGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTGGGATa                                                                                             <  1:1925856/100‑1 (MQ=255)
        gTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATa                                                                                             >  2:2545334/1‑100 (MQ=255)
        gTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATa                                                                                             <  2:926886/100‑1 (MQ=255)
         tGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATaa                                                                                            >  1:34483/1‑100 (MQ=255)
             cAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACg                                                                                        >  1:2699845/1‑100 (MQ=255)
             cAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACg                                                                                        >  1:1066103/1‑100 (MQ=255)
              aGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGt                                                                                       <  2:860327/100‑1 (MQ=255)
              aGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGt                                                                                       >  1:262243/1‑100 (MQ=255)
                 ttAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTcg                                                                                    <  1:3386687/100‑1 (MQ=255)
                    gcgcCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGt                                                                                 >  2:1241994/1‑100 (MQ=255)
                     cgcCTCACGCAGCCAGGGGTTAAATGCGTTAGGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGtc                                                                                <  1:1964498/100‑1 (MQ=255)
                      gcCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGtct                                                                               >  1:2082347/1‑100 (MQ=255)
                      gcCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGGCGGATAAGACGTTCGCGtct                                                                               >  1:222488/1‑100 (MQ=255)
                        cTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCA                                                                             >  1:2383207‑M2/1‑100 (MQ=255)
                        cTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCA                                                                             >  1:2442573‑M2/1‑100 (MQ=255)
                          cACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATC                                                                           <  2:1601709‑M2/100‑1 (MQ=255)
                          cACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGAAAAGAACCGGGTCGGATAAGACGTTAGCGTCTCAT                                                                            <  1:1401587‑M2/99‑1 (MQ=255)
                           aCGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcggatgagacgcgaacgtcttatcc                                                                          <  1:865630‑M1/100‑28 (MQ=255)
                            cGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCG                                                                         <  2:638569‑M2/100‑1 (MQ=255)
                            cGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCG                                                                         >  1:3411406‑M2/1‑100 (MQ=255)
                              cAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGAC                                                                       >  1:1403948‑M2/1‑100 (MQ=255)
                              cAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGAC                                                                       >  1:2646206‑M2/1‑100 (MQ=255)
                              cAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGAC                                                                       >  2:2113579‑M2/1‑100 (MQ=255)
                               aGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACc                                                                      >  2:2423600‑M2/1‑99 (MQ=255)
                                gCCAGGGTTTAAATGCGTTAAGCGAGGCGATGATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcggatgagacgcgaacgtcttatccgaccc                                                                     <  2:3200036‑M1/100‑33 (MQ=255)
                                gCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATGGCGGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcggatgagacgcgaacgtcttatccgaccc                                                                     <  1:792372‑M1/100‑33 (MQ=255)
                                gCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATGAGACGCGAACGTCTTATCCGACcc                                                                     >  2:850947‑M2/1‑98 (MQ=255)
                                 ccAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcggatgagacgcgaacgtcttatccgacccg                                                                    <  2:914321‑M1/100‑34 (MQ=255)
                                 ccAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcggatgagacgcgaacgtcttatccgacccg                                                                    <  1:3148443‑M1/100‑34 (MQ=255)
                                  cAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcggatgagacgcgaacgtcttatccgacccg                                                                    <  1:2459962‑M1/99‑34 (MQ=255)
                                  cAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGa                                                                   >  1:2701339/1‑100 (MQ=255)
                                  cAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGa                                                                   >  1:615429/1‑100 (MQ=255)
                                   aGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGgtcggatgagacgcgaacgtcttatccgccccggt                                                                  <  1:3304684‑M1/100‑36 (MQ=255)
                                   aGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGAt                                                                  >  1:164469/1‑100 (MQ=255)
                                      ggTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGt                                                               >  2:2139550/1‑100 (MQ=255)
                                      ggTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGt                                                               >  2:2561389/1‑100 (MQ=255)
                                       gTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGtt                                                              >  1:397228/1‑100 (MQ=255)
                                         tAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTa                                                            <  2:1260243/100‑1 (MQ=255)
                                         tAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTa                                                            >  2:642777/1‑100 (MQ=255)
                                              gCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCt                                                       <  2:68840/100‑1 (MQ=255)
                                              gCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCt                                                       <  2:68707/100‑1 (MQ=255)
                                              gCGTGAAGCGAGGCGATTATCGCTGCGACGAGGGATGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAAcc                                                         <  1:530650/98‑1 (MQ=255)
                                               cGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTg                                                      >  2:1961114/1‑100 (MQ=255)
                                               cGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGCCGGATAAGACGTTCGCTTCTCATCCGACCTGATTGTTTAACCCTg                                                      >  2:1664202/1‑100 (MQ=255)
                                               cGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAACCACAGAACCGGGTCGGATACGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTg                                                      >  1:1864663/1‑100 (MQ=255)
                                                 ttAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGAc                                                    <  2:1635328/100‑1 (MQ=255)
                                                   aaGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGAcgc                                                  >  2:1092413/1‑100 (MQ=255)
                                                      cGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGTTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGcgcc                                               <  2:953114/100‑1 (MQ=255)
                                                       gAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGcgccg                                              >  1:2365732/1‑100 (MQ=255)
                                                          gCGATTATCGCTGCGACTAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCTTACTTGATTGTTTAACCCTGACGcgccg                                              <  1:3262762/97‑1 (MQ=255)
                                                           cGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGGCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCttt                                          >  2:1786441/1‑100 (MQ=255)
                                                             cttccgatctcgacgaAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCg                                        <  1:31751/90‑1 (MQ=255)
                                                                aTCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCca                                     <  1:2747361/100‑1 (MQ=255)
                                                                aTCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGGCGGATAAGACGTTCGCGTCTCATCCGACctggttctgtgcttaaacctgcttcgtcgcagcg                                     <  2:2953802‑M2/100‑35 (MQ=255)
                                                                  cGCTGCGACGAAGCAGGTTTAAGCACAGAACCAGgtcggatgagacgcgaacgtcttatccgccccggttctgtgcttaaacctgcttcgtcgcagcgat                                   <  2:2953802‑M1/100‑67 (MQ=255)
                                                                     tGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCatcatc                                >  2:391912/1‑100 (MQ=255)
                                                                     tGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCatcatc                                >  2:2177544/1‑100 (MQ=255)
                                                                      gCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCAtct                               <  1:1747834/100‑1 (MQ=255)
                                                                       cgacgaAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCgagatcggaag                              >  2:31751/1‑90 (MQ=255)
                                                                        gacgaAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCAtcttc                             <  1:852498/100‑1 (MQ=255)
                                                                        gacgaAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCAtcttc                             <  2:2601591/100‑1 (MQ=255)
                                                                         acgaAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCAtcttct                            <  2:2782473/100‑1 (MQ=255)
                                                                              gatggTTTAAGCACAGTACCGGGTGCGATAAGACGTTCGCGTCTTATCCGACCTGATTGTGTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAg                        <  1:2235446/96‑1 (MQ=255)
                                                                               cAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAgcg                      >  2:2744928/1‑100 (MQ=255)
                                                                               cAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAgcg                      <  1:1127588/100‑1 (MQ=255)
                                                                                aGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAgcgc                     <  2:1647715/100‑1 (MQ=255)
                                                                                 ggTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCa                    >  1:3016979/1‑100 (MQ=255)
                                                                                 ggTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCa                    >  2:630322/1‑100 (MQ=255)
                                                                                 ggTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCa                    >  2:1015546/1‑100 (MQ=255)
                                                                                 ggTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCATCTCATCCGACCGGATTGTTTAACCCTAACGCGCCGCTTTCGCCATCATCTTCTTCACCGCa                    >  1:1157173/1‑100 (MQ=255)
                                                                                   tttAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATg                  >  2:1234501/1‑100 (MQ=255)
                                                                                     tAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATgag                >  1:1561599/1‑100 (MQ=255)
                                                                                     tAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATgag                <  1:2268253/100‑1 (MQ=255)
                                                                                     tAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGAAGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATg                  >  2:1908770/1‑98 (MQ=255)
                                                                                      aaGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATgaga               >  2:3378193/1‑100 (MQ=255)
                                                                                       aGCACAGAACCGGGTCGGATAAGCCGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGaa              >  2:959821/1‑100 (MQ=255)
                                                                                       aGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGaa              >  2:2960468/1‑100 (MQ=255)
                                                                                       aGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTATTCAGCGCATGAGaa              >  2:3365278/1‑100 (MQ=255)
                                                                                         cacaGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGAAAc            >  2:2481882/1‑100 (MQ=255)
                                                                                         cacaGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGAAAc            >  1:1423558/1‑100 (MQ=255)
                                                                                         cacaGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGAAAc            >  2:1428066/1‑100 (MQ=255)
                                                                                           caGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGAAACCg          >  2:1446269/1‑100 (MQ=255)
                                                                                             gAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGCCCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGAAACCGca        <  2:2899073/100‑1 (MQ=255)
                                                                                               aCCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGAAACCGcaac      <  2:695273/100‑1 (MQ=255)
                                                                                                ccGGGTCGGATAAGACGTTCGCGTCTCATCCGACccggttctgtgcttaaacctgcttcgtcgcagcgataatcgcctcgcttaacgcatttaacccctg     <  1:1519603‑M2/100‑67 (MQ=255)
                                                                                                 cGGGTCGGATAAGACGTTCGCGTCTCATCCGACccggttctgtgcttaaacctgcttcgtcgcagcgataatcgcctcgcttaacgcatttaacccctgg    <  1:3148443‑M2/100‑68 (MQ=255)
                                                                                                 cGGGTCGGATAAGACGTTCGCGTCTCATCCGACccggttctgtgcttaaacctgcttcgtcgcagcgataatcgcctcgcttaacgcatttaacccctgg    <  2:914321‑M2/100‑68 (MQ=255)
                                                                                                 cGGGTCGGATAAGACGTTCGCGTCTCATCCGACccggttctgtgcttaaacctgcttcgtcgcagcgataatcgcctcgcttaacgcatttaacccctg     <  1:2459962‑M2/99‑67 (MQ=255)
                                                                                                  gggtcggataagacgttcgcgtctcatccgacccggttctgtgcttaaacctgcttcgtcgcagcgataatcgcctcgcttaacgcatttaacccctggc   >  2:850947‑M1/1‑2 (MQ=255)
                                                                                                  gggTCGGATAAGACGTTCGCGTCTCATCCGACccggttctgtgcttaaacctgcttcgtcgccgccataatcgcctcgcttaacgcatttaacccctggc   <  1:792372‑M2/100‑69 (MQ=255)
                                                                                                  gggTCGGATAAGACGTTCGCGTCTCATCCGACccggttctgtgcttaaacctgcttcgtcgcagcgatcatcgcctcgcttaacgcatttaaaccctggc   <  2:3200036‑M2/100‑69 (MQ=255)
                                                                                                  gggTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGAAACCGCAACaaa   >  1:860066/1‑100 (MQ=255)
                                                                                                   ggtcggatgagacgcgaacgtcttatccgacccggttctgtgcttaaacctgcttcgtcgcagcgataatcgcctcgcttaacgcatttaacccctggct  >  2:2423600‑M1/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAAGCACAGAACCGGGTCGGATAAGACGTTCGCGTCTCATCCGACCTGATTGTTTAACCCTGACGCGCCGCTTTCGCCATCATCTTCTTCAGCGCATGAGAAACCGCAACAAAC  >  NC_000913/2944898‑2945096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.