New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4148478NA (NA)8 (0.070) 5/164 NT NA noncoding (49/82 nt) REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4148511 NA (NA)noncoding (82/82 nt) REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 197 total aligned reads displayed.

GAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCG  >  NC_000913/4148379‑4148577
                                                                                                   |                                                                                                   
gAAAAGTCTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGTGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAg                                                                                                     <  1:1836873/100‑1 (MQ=255)
 aaaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGg                                                                                                    <  1:1558323‑M1/100‑2 (MQ=255)
 aaaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGg                                                                                                    <  2:2181166‑M1/100‑2 (MQ=255)
  aaaGTGTGGCCTGAGGGGAGGTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGg                                                                                                    <  2:1172852‑M1/99‑2 (MQ=255)
     gtgtGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccgg                                                                                                >  2:1544845‑M1/1‑95 (MQ=255)
        tgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATa                                                                                             <  1:2732148/100‑1 (MQ=255)
         ggCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATaa                                                                                            >  2:2478891/1‑100 (MQ=255)
         ggCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATaa                                                                                            >  2:2875003/1‑100 (MQ=255)
           ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                                          <  2:227602/100‑1 (MQ=255)
           ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                                          <  2:3310228/100‑1 (MQ=255)
           ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                                          >  2:3412731/1‑100 (MQ=255)
               aGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcgcg                                                                                      <  1:317287/100‑1 (MQ=255)
                 gggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTc                                                                                    >  2:974286/1‑100 (MQ=255)
                  ggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCa                                                                                   >  2:2197291/1‑100 (MQ=255)
                  ggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCa                                                                                   >  2:1491028/1‑100 (MQ=255)
                    aGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAg                                                                                 <  2:2741892/100‑1 (MQ=255)
                    aGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAg                                                                                 <  2:2066918/100‑1 (MQ=255)
                     gTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCCAGc                                                                                >  2:1351215/1‑100 (MQ=255)
                     gTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGc                                                                                >  1:1109637/1‑100 (MQ=255)
                        cGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTc                                                                             <  2:1701412/100‑1 (MQ=255)
                         gATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCg                                                                            <  2:668669/100‑1 (MQ=255)
                         gATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCg                                                                            <  2:628402/100‑1 (MQ=255)
                          aTGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTAGCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGc                                                                           <  1:1633840/100‑1 (MQ=255)
                           tGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCA                                                                          <  2:2650383‑M2/100‑1 (MQ=255)
                            gTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCAT                                                                         >  1:2084618‑M2/1‑100 (MQ=255)
                              aaaCATTGCGTCCGTTATATTGCCGGATGTGGCGTAAACGCCGTAGCTAGCCTACCGGCGCGTGCGGTAGTCCTTATAAGACGGGTCAGGCGTCGCATcc                                                                       >  1:1135939/1‑100 (MQ=255)
                              aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCC                                                                       <  1:1879934‑M2/100‑1 (MQ=255)
                              aaaCATTGCGGCAGTTGTATTGCCGGATGTGGAGTAACCGCCTTCTCCAGCCTACCGCCGCGATCCGTAGGCGGGATAAGACGCGGCAAGCGCCGCATC                                                                        <  1:141486‑M2/99‑1 (MQ=255)
                               aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccg                                                                      <  2:2112968‑M1/100‑32 (MQ=255)
                               aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCG                                                                      >  2:1078200‑M2/1‑100 (MQ=255)
                               aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCG                                                                      >  2:1281751‑M2/1‑100 (MQ=255)
                               aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCG                                                                      >  2:803701‑M2/1‑100 (MQ=255)
                                aCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGG                                                                     <  1:3094797‑M2/100‑1 (MQ=255)
                                 cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggc                                                                    <  2:477708‑M1/100‑34 (MQ=255)
                                   ttGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcct                                                                  <  1:1120299‑M1/100‑36 (MQ=255)
                                     gCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAAt                                                                >  1:3210635/1‑100 (MQ=255)
                                        gCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgc                                                             <  2:1102130/100‑1 (MQ=255)
                                         cAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgcg                                                            >  1:798996/1‑100 (MQ=255)
                                         cAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgc                                                             >  2:1997475/1‑99 (MQ=255)
                                            ttGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCt                                                         >  2:1313567/1‑100 (MQ=255)
                                            ttGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCt                                                         >  1:668464/1‑100 (MQ=255)
                                                aTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCt                                                     >  1:2365124/1‑100 (MQ=255)
                                                aTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCt                                                     <  1:974284/100‑1 (MQ=255)
                                                  tGCCGGATGTGGCGTAAACGACTTATCCAGCCTGCCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTg                                                    <  1:518224/99‑1 (MQ=255)
                                                   gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                                  <  1:318542/100‑1 (MQ=255)
                                                   gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                                  >  2:1705879/1‑100 (MQ=255)
                                                       gATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAAtt                                              <  2:3027080/100‑1 (MQ=255)
                                                         tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                                            <  1:1037596/100‑1 (MQ=255)
                                                           tgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg                                          >  2:2599016/1‑100 (MQ=255)
                                                           tgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg                                          >  1:1355583/1‑100 (MQ=255)
                                                           tgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg                                          <  2:71857/100‑1 (MQ=255)
                                                           tgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCAACCGGCAAATAGCGCCTGGCTGATAATTACTg                                          >  2:957266/1‑100 (MQ=255)
                                                            ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                                         >  1:2540941/1‑100 (MQ=255)
                                                             gCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGAt                                        <  1:911275/100‑1 (MQ=255)
                                                             gCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGAt                                        >  1:2886147/1‑100 (MQ=255)
                                                             gCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTAGCATCCGGCAAATAGCGCCTGGCTGATAATTAATGa                                         >  2:1855993/1‑99 (MQ=255)
                                                              cGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGAtt                                       >  2:878303/1‑100 (MQ=255)
                                                                tAAACGCCTTATCCAGCCTCCCCCCGCGATCGGTAGGTCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGGTTaa                                     <  1:2304666/100‑2 (MQ=37)
                                                                 aaaCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAcc                                    >  2:2689657/1‑100 (MQ=255)
                                                                 aaaCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAcc                                    >  2:3092597/1‑100 (MQ=255)
                                                                  aaCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAccc                                   >  2:560278/1‑100 (MQ=255)
                                                                  aaCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGAAAATAGCGCCTGGCTGATAATTACTGATTAccc                                   >  2:1453428/1‑100 (MQ=255)
                                                                   aCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCa                                  <  2:71062/100‑1 (MQ=255)
                                                                    cGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATTGCGCCTGGCTGATAATTACCGATTACCCAc                                 >  1:2217404/1‑100 (MQ=255)
                                                                    cGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAc                                 <  1:2158244/100‑1 (MQ=255)
                                                                    cGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAc                                 >  2:2994289/1‑100 (MQ=255)
                                                                     gCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAcc                                <  1:3026952/100‑1 (MQ=255)
                                                                     gCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAcc                                <  2:2446209/100‑1 (MQ=255)
                                                                      ccctATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCt                               <  1:764239/97‑1 (MQ=255)
                                                                      ccTTATCCAGCCTACCGCCGCGATCTGTAGTCCGGATAATATGCGTCATGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCt                               <  2:2749439/100‑1 (MQ=39)
                                                                      ccTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCTTCAAGCGTCGCATCCGGCAAATATCGCCTGGCTGATAATTACTGATTAccc                                   <  1:2825632/96‑1 (MQ=255)
                                                                         tATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGAt                            >  2:2236854/1‑100 (MQ=255)
                                                                           tCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg                          <  1:1753642/100‑1 (MQ=255)
                                                                           tCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg                          >  2:1753650/1‑100 (MQ=255)
                                                                           tCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg                          <  2:2956349/100‑1 (MQ=255)
                                                                            ccAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                         >  2:2767127/1‑100 (MQ=255)
                                                                            ccAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                         >  1:1230685/1‑100 (MQ=255)
                                                                             catccTACCGCCGCGATCTGTCGGCCGGATACGACGCGTCAACCGTCGCATCCGGCAAATATCGCCTGGTTCATAATTACTGATTACCCACCTGATCGcc                        <  1:2599513/97‑1 (MQ=37)
                                                                              aGCCTACCGCCGCGATCTTTAGGCCGGATAAGACTCGTCAAGCTTTTCATCCTGCAAATAGCGCCTGTCTGATAATTACTGATTACCCACCTGATCGCCa                       <  1:1689774/100‑1 (MQ=255)
                                                                                ccTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATa                     <  2:2540954/100‑1 (MQ=255)
                                                                                  tACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAgg                   >  2:1044690/1‑100 (MQ=255)
                                                                                   aCCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAggg                  >  2:1897839/1‑100 (MQ=255)
                                                                                    ccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGc                 <  2:1115097/100‑1 (MQ=255)
                                                                                    ccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGc                 >  2:3382195/1‑100 (MQ=255)
                                                                                    ccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGc                 <  2:1646774/100‑1 (MQ=255)
                                                                                      gccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAg               >  2:85183/1‑100 (MQ=255)
                                                                                      gccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAg               >  1:3352348/1‑100 (MQ=255)
                                                                                        cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg             <  1:3071316/100‑1 (MQ=255)
                                                                                        cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg             <  2:147722/100‑1 (MQ=255)
                                                                                        cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg             <  1:2004713/100‑1 (MQ=255)
                                                                                        cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg             <  1:1447366/100‑1 (MQ=255)
                                                                                           gATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgtgt          >  1:2787152/1‑100 (MQ=255)
                                                                                              ccgTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGt       >  2:2305695/3‑100 (MQ=255)
                                                                                              cTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        <  1:1004847/99‑1 (MQ=255)
                                                                                              cTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGt       <  2:607959/100‑1 (MQ=255)
                                                                                                gTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTaa     <  2:222630/100‑1 (MQ=255)
                                                                                                  aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATc   <  1:1811084/100‑1 (MQ=255)
                                                                                                  aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATc   >  2:465676/1‑100 (MQ=255)
                                                                                                  aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGCGCAGTGTGTCGTAATc   <  1:1080766/100‑1 (MQ=255)
                                                                                                   ggCCGGATAAGACGCGTCAAGCGTCGCCTCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAACCACCTGATCGCCATAGGGCAGTGTGTCGTAATCg  >  1:3419330/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCG  >  NC_000913/4148379‑4148577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.