New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4587878NA (NA)9 (0.080) 6/162 NT NA noncoding (7/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4587891 NA (NA)noncoding (20/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 159 total aligned reads displayed.

GGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCAT  >  NC_000913/4587779‑4587977
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ggTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGAT                                                                                                     <  2:329495‑M1/100‑1 (MQ=255)
aaccgcatagcacgatggtgtttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGAt                                                                                                     >  2:1524810‑M1/93‑100 (MQ=255)
   tcACTTAATAATCGAAAACGAATTAGTGGTTTCTTCACGTTTGTTGAAGGTGCTGAAACTGGATATTTACTATTTTGATTTAAATATCAGGCCGGATGCg                                                                                                  <  1:2369328/99‑1 (MQ=255)
    cACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCgg                                                                                                 >  1:12545/1‑100 (MQ=255)
     aCTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGc                                                                                                <  2:339345/100‑1 (MQ=255)
        tAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTgc                                                                                             >  2:3175477/1‑100 (MQ=255)
        tAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTgc                                                                                             >  1:2767992/1‑100 (MQ=255)
           tGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGcc                                                                                          >  1:312056/1‑100 (MQ=255)
           tGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGcc                                                                                          <  2:2375869/100‑1 (MQ=255)
           tGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGcc                                                                                          >  1:6627/1‑100 (MQ=255)
            gATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCt                                                                                         >  2:1003442/1‑100 (MQ=255)
             aTCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCtt                                                                                        >  2:1308928/1‑100 (MQ=255)
               cGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTat                                                                                      <  1:2732560‑M2/100‑3 (MQ=255)
                gAAAACGATGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                     <  2:1316109‑M2/100‑4 (MQ=255)
                gAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                     <  2:141189‑M2/100‑4 (MQ=255)
                 gtgtttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATcc                                                                                    >  1:3130223‑M1/76‑100 (MQ=255)
                    tttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGc                                                                                 >  2:1239500‑M1/73‑100 (MQ=255)
                    aCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggc                                                                                 >  2:2468737‑M2/1‑93 (MQ=255)
                     ttccgatcttccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGcc                                                                                >  1:1257981‑M1/72‑100 (MQ=255)
                     ttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGcc                                                                                >  2:2285937‑M1/72‑100 (MQ=255)
                     cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccggcc                                                                                <  2:2891289‑M1/100‑22 (MQ=255)
                     cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACCGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcc                                                                                >  2:788347‑M2/1‑92 (MQ=255)
                      tatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGccc                                                                               >  1:1453671‑M1/71‑100 (MQ=255)
                      gAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccggcct                                                                               <  2:43868‑M1/100‑23 (MQ=255)
                       aaGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccggcctg                                                                              <  1:750790‑M1/100‑24 (MQ=255)
                       aaGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCa                                                                              <  2:2346331/100‑1 (MQ=255)
                        aGTAGGTGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccggcctg                                                                              <  2:3091097‑M1/99‑24 (MQ=255)
                        aGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCAt                                                                             <  1:2650510/100‑1 (MQ=255)
                         gTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccggcctgat                                                                            <  1:2578571‑M1/100‑26 (MQ=255)
                         gTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATa                                                                            >  2:678769/1‑100 (MQ=255)
                          tAGGGGTTTCTTCACGTTTGTTGAAGGTGCCAAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATaa                                                                           >  2:1633930/1‑100 (MQ=255)
                            ggggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcc                                                                         <  1:551259/100‑1 (MQ=255)
                            ggggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcc                                                                         <  2:2064251/100‑1 (MQ=255)
                              tccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCcttatccggccagatcggaa                                                                       <  2:1257985‑M1/38‑10 (MQ=255)
                              ggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcccc                                                                       >  1:3180756/1‑100 (MQ=255)
                                tttCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCtt                                                                     <  2:2796641/100‑1 (MQ=255)
                                  tcttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTAc                                                                   >  1:1732459/1‑100 (MQ=255)
                                  tcttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACGATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTAc                                                                   <  2:953928/100‑1 (MQ=255)
                                   cttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                  >  1:678527/1‑100 (MQ=255)
                                   cttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                  <  1:2196488/100‑1 (MQ=255)
                                     tcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTc                                                                <  1:3377081/100‑1 (MQ=255)
                                      cACGTTTGTTGAAGGTGCCGAAACTGGCTATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                               >  1:2607308/1‑100 (MQ=255)
                                       ncGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCt                                                              >  2:372585/2‑100 (MQ=255)
                                       cggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCt                                                              >  1:2862154‑M1/54‑100 (MQ=255)
                                           gatctgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAc                                                          <  2:111689/96‑1 (MQ=255)
                                            tgttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAcc                                                         <  1:15953/100‑1 (MQ=255)
                                               tgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCg                                                      <  2:1029081/100‑1 (MQ=255)
                                                gAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAcagatc                                                     >  1:111689/1‑95 (MQ=255)
                                                  aGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCaa                                                   >  2:366849/1‑100 (MQ=255)
                                                   ggTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCaaa                                                  >  1:3182651/1‑100 (MQ=255)
                                                   ggTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCaaa                                                  >  2:1775375/1‑100 (MQ=255)
                                                       ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCa                                              >  2:2759644/1‑100 (MQ=255)
                                                        cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                             >  1:1100303/1‑100 (MQ=255)
                                                         gAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGc                                            >  1:2692628/1‑100 (MQ=255)
                                                         gAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGc                                            <  2:2612330/100‑1 (MQ=255)
                                                          aaaCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGcc                                           <  2:1954053/100‑1 (MQ=255)
                                                                gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                     >  1:608546/1‑100 (MQ=255)
                                                                gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                     <  2:176817/100‑1 (MQ=255)
                                                                  tatGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtctc                                   >  1:2236413/1‑100 (MQ=255)
                                                                     ggacgctgttGAGTGACATATCAGACCCGATCCGTCTGCGCCTTATCCGGCCCACACCCCCCTACTTCCTCAACCCCGGAAACGCAGCCCGAATCTCTtc                                <  1:847352/92‑1 (MQ=255)
                                                                      gACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATctct                                  <  1:3252541/97‑1 (MQ=255)
                                                                      gACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcc                               <  2:298831/100‑1 (MQ=255)
                                                                      gACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcc                               <  2:1131118/100‑1 (MQ=255)
                                                                       aCTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcct                              >  1:2126846/1‑100 (MQ=255)
                                                                        cTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcctc                             >  1:1497750/1‑100 (MQ=255)
                                                                          aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCg                           >  2:3213163/1‑100 (MQ=255)
                                                                           ttttGAGTGAAATATCAGGCCGGATaaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtg                          <  2:2016004‑M1/100‑76 (MQ=255)
                                                                           ttttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCgg                          >  2:3228884/1‑100 (MQ=255)
                                                                                aGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCACACGCAGCCCGAATCTCTTCCTCCGGCAGCt                     >  2:2702430/1‑100 (MQ=255)
                                                                                 gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                    <  2:2060726/100‑1 (MQ=255)
                                                                                   gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                  <  2:2198566/100‑1 (MQ=255)
                                                                                     aaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATc                <  1:3010021/100‑1 (MQ=255)
                                                                                       tatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc              <  1:1775367/100‑1 (MQ=255)
                                                                                        atCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCg             <  1:2623215/100‑1 (MQ=255)
                                                                                        atCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCg             <  2:2683372/100‑1 (MQ=255)
                                                                                        atCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCg             <  2:611404/100‑1 (MQ=255)
                                                                                         tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGCGTCTCTTCCTCCGGCAGCTGGATCCCGa            <  1:1050108/100‑1 (MQ=255)
                                                                                         tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa            >  1:1008199/1‑100 (MQ=255)
                                                                                         tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa            <  1:2024251/100‑1 (MQ=255)
                                                                                         tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa            <  2:1300608/100‑1 (MQ=255)
                                                                                         tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa            <  1:2887280/100‑1 (MQ=255)
                                                                                          cAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctactt           <  1:750790‑M2/100‑78 (MQ=255)
                                                                                          cAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacacctact            <  2:3091097‑M2/99‑77 (MQ=255)
                                                                                           aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc          <  2:43868‑M2/100‑79 (MQ=255)
                                                                                           aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc          <  1:2487042‑M2/100‑79 (MQ=255)
                                                                                           aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa          <  2:686745/100‑1 (MQ=255)
                                                                                           aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa          >  2:1753366/1‑100 (MQ=255)
                                                                                           aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa          >  1:244950/1‑100 (MQ=255)
                                                                                            ggCCGGATaaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccggtttcggcaccttcaacaaacgtgaagaaacccctacttcg         >  2:788347‑M1/1‑8 (MQ=255)
                                                                                            ggCCGGATaaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcg         >  2:2327292‑M1/1‑8 (MQ=255)
                                                                                            ggCCGGATaaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcg         <  2:3010037‑M1/100‑93 (MQ=255)
                                                                                            ggCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcg         <  2:2891289‑M2/100‑80 (MQ=255)
                                                                                            ggCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcg         <  1:2633582‑M2/100‑80 (MQ=255)
                                                                                             gCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgt        <  2:1889399‑M2/100‑81 (MQ=255)
                                                                                              ccGGATaaggcgcagcaccatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaatcccctacttcg         <  1:585774‑M1/98‑93 (MQ=255)
                                                                                                GGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAacac     >  2:1832875‑M1/1‑100 (MQ=255)
                                                                                                 gATaaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacatcgttttc    <  2:1316109‑M1/100‑98 (MQ=255)
                                                                                                   taaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgttttcga  >  2:352299‑M1/1‑1 (MQ=255)
                                                                                                   taaggcgcagccgcatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgttttcga  >  2:12545‑M1/1‑1 (MQ=255)
                                                                                                   TGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCAt  >  1:429027‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCAT  >  NC_000913/4587779‑4587977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.