New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4587878NA (NA)9 (0.080) 6/162 NT NA noncoding (7/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4587891 NA (NA)noncoding (20/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 134 total aligned reads displayed.

ATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGT  >  NC_000913/4587792‑4587990
                                                                                                   |                                                                                                   
 tCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTCTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCtt                                                                                                     >  1:2199551/1‑99 (MQ=255)
 tCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTa                                                                                                    >  2:352299‑M2/1‑99 (MQ=255)
  cGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTat                                                                                                   <  1:2732560‑M2/100‑3 (MQ=255)
   ggtgtttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATc                                                                                                  >  2:1889750‑M1/77‑100 (MQ=255)
   gAAAACGATGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                                  <  2:1316109‑M2/100‑4 (MQ=255)
   gAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                                  <  2:141189‑M2/100‑4 (MQ=255)
    gtgtttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATcc                                                                                                 >  1:3130223‑M1/76‑100 (MQ=255)
       tttatcgggatccagctgccggaggaagagattcgggcttcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGc                                                                                              >  2:322891‑M1/73‑100 (MQ=255)
       tttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGc                                                                                              >  2:1239500‑M1/73‑100 (MQ=255)
       aCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggc                                                                                              >  2:2468737‑M2/1‑93 (MQ=255)
        ttccgatcttccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGcc                                                                                             >  1:1257981‑M1/72‑100 (MQ=255)
        ttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGcc                                                                                             >  2:2285937‑M1/72‑100 (MQ=255)
        ttatcgggatccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGcc                                                                                             >  2:760646‑M1/72‑100 (MQ=255)
          aaGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCa                                                                                           <  2:2346331/100‑1 (MQ=255)
            gTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATa                                                                                         >  2:678769/1‑100 (MQ=255)
             tAGGGGTTTCTTCACGTTTGTTGAAGGTGCCAAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATaa                                                                                        >  2:1633930/1‑100 (MQ=255)
               ggggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcc                                                                                      <  2:2064251/100‑1 (MQ=255)
               ggggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcc                                                                                      <  1:551259/100‑1 (MQ=255)
                gggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAccc                                                                                     <  2:2762542/100‑1 (MQ=255)
                gggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAccc                                                                                     >  2:2964949/1‑100 (MQ=255)
                 tccagctgccggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCcttatccggccagatcggaa                                                                                    <  2:1257985‑M1/38‑10 (MQ=255)
                  gTTTCTTCACGTTTGTTGAAGCTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCt                                                                                   >  2:131314/1‑100 (MQ=255)
                   tttCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCtt                                                                                  <  2:2796641/100‑1 (MQ=255)
                     tcttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTAc                                                                                >  1:1732459/1‑100 (MQ=255)
                     tcttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACGATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTAc                                                                                <  2:953928/100‑1 (MQ=255)
                      cttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                               >  1:678527/1‑100 (MQ=255)
                      cttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                               <  1:2196488/100‑1 (MQ=255)
                         cACGTTTGTTGAAGGTGCCGAAACTGGCTATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                                            >  1:2607308/1‑100 (MQ=255)
                         cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaa                                                                            <  2:2016004‑M2/100‑26 (MQ=255)
                          ncGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCt                                                                           >  2:372585/2‑100 (MQ=255)
                          cggaggaagagattcgggctgcgtttgcggggttgaggaagtaaggggttatgGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCt                                                                           >  1:2862154‑M1/54‑100 (MQ=255)
                              gatctgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAc                                                                       <  2:111689/96‑1 (MQ=255)
                               tgttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAcc                                                                      <  1:15953/100‑1 (MQ=255)
                                  tgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCg                                                                   >  1:298829/1‑100 (MQ=255)
                                  tgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCg                                                                   <  2:1029081/100‑1 (MQ=255)
                                     aGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCaa                                                                >  2:366849/1‑100 (MQ=255)
                                      ggTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCaaa                                                               >  1:2683355/1‑100 (MQ=255)
                                      ggTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCaaa                                                               >  1:3182651/1‑100 (MQ=255)
                                      ggTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCaaa                                                               >  2:1775375/1‑100 (MQ=255)
                                        tGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACg                                                             >  1:2445866/1‑100 (MQ=255)
                                         gCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                                            >  2:1181660/1‑100 (MQ=255)
                                           cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                                          >  1:1100303/1‑100 (MQ=255)
                                            gAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGc                                                         >  1:2692628/1‑100 (MQ=255)
                                            gAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGc                                                         <  2:1068977/100‑1 (MQ=255)
                                            gAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGc                                                         <  2:2612330/100‑1 (MQ=255)
                                             aaaCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGcc                                                        <  2:1954053/100‑1 (MQ=255)
                                               aCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCg                                                      >  2:809077/1‑100 (MQ=255)
                                                   gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                                  <  2:176817/100‑1 (MQ=255)
                                                   gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                                  >  1:608546/1‑100 (MQ=255)
                                                   gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCGTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                                  <  2:1690403/100‑1 (MQ=255)
                                                    atatGTACCATAATGAGACAAACATCAGGGCGCATGCCACTGCGCCTTAACCGGCCCATAACCCCTGACTTCCTCATCCGCTCAAACGCAGCCCGAAt                                                   <  1:1365786/98‑1 (MQ=255)
                                                      atGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATctct                                               >  2:1275392/1‑100 (MQ=255)
                                                      atGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATctct                                               >  1:532547/1‑100 (MQ=255)
                                                        ggacgctgttGAGTGACATATCAGACCCGATCCGTCTGCGCCTTATCCGGCCCACACCCCCCTACTTCCTCAACCCCGGAAACGCAGCCCGAATCTCTtc                                             <  1:847352/92‑1 (MQ=255)
                                                         gACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATctct                                               <  1:3252541/97‑1 (MQ=255)
                                                         gACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcc                                            <  2:298831/100‑1 (MQ=255)
                                                         gACTATTATCAGTGAAATATCAGGCCGGATGCGTCTGCGCCGTATCCGACCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGCATCTCTtcc                                            <  1:3046390/100‑1 (MQ=255)
                                                          aCTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcct                                           >  1:2126846/1‑100 (MQ=255)
                                                          aCTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcct                                           >  1:3200915/1‑100 (MQ=255)
                                                           cTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcctc                                          >  1:1497750/1‑100 (MQ=255)
                                                             aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCg                                        >  2:3159590/1‑100 (MQ=255)
                                                              ttttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCACACGCAGCCCGAATCTCTtcctcc                                         >  1:776877/1‑98 (MQ=255)
                                                              ttttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCgg                                       >  2:3228884/1‑100 (MQ=255)
                                                              ttttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCgg                                       <  2:2887756/100‑1 (MQ=255)
                                                                   aGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCACACGCAGCCCGAATCTCTTCCTCCGGCAGCt                                  >  2:2702430/1‑100 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                 <  2:2060726/100‑1 (MQ=255)
                                                                      gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                               <  2:2198566/100‑1 (MQ=255)
                                                                      gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                               >  2:269680/1‑100 (MQ=255)
                                                                       aaaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCACATAACCCCTTACTCCCTCAACCCCGCCACCGCAGCCCGACTCTCTTCCTCCGGCAACTgg                                >  1:1466509/1‑98 (MQ=255)
                                                                        aaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATc                             <  1:3010021/100‑1 (MQ=255)
                                                                         atatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATcc                            <  2:3200933/100‑1 (MQ=255)
                                                                          tatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc                           >  1:611402/1‑100 (MQ=255)
                                                                          tatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATccc                           <  1:1775367/100‑1 (MQ=255)
                                                                           atCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCg                          <  2:611404/100‑1 (MQ=255)
                                                                           atCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCg                          <  1:2623215/100‑1 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGCGTCTCTTCCTCCGGCAGCTGGATCCCGa                         <  1:1050108/100‑1 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa                         >  1:1008199/1‑100 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa                         <  1:2024251/100‑1 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa                         <  1:2887280/100‑1 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa                         <  2:1300608/100‑1 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctactt                        <  1:750790‑M2/100‑78 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacacctact                         <  2:3091097‑M2/99‑77 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt                        <  1:3180557/100‑1 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt                        <  2:2198741/100‑1 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc                       <  2:43868‑M2/100‑79 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc                       <  1:2487042‑M2/100‑79 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                       <  2:686745/100‑1 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                       >  1:244950/1‑100 (MQ=255)
                                                                               ggCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcg                      <  1:2633582‑M2/100‑80 (MQ=255)
                                                                                gCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgt                     <  2:1889399‑M2/100‑81 (MQ=255)
                                                                                 CCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAac                    >  2:449428‑M1/1‑100 (MQ=255)
                                                                                   GGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAacac                  >  2:1771142‑M1/1‑100 (MQ=255)
                                                                                     ATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACAcc                 >  1:2822260‑M1/1‑99 (MQ=255)
                                                                                      TGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCAt               >  1:429027‑M1/1‑100 (MQ=255)
                                                                                       gCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATc              <  2:2688189/100‑1 (MQ=255)
                                                                                        cGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCg             >  1:1243326/1‑100 (MQ=255)
                                                                                              cgcCTTATCCGGCCCATAACCCCTTACTTCCTCCACCCCGCAAACGCAGCCCGAATCTATTCCTCCGGCAGCTGGATACCGCTAAACACCATCGTGCTa        <  1:2852766/99‑1 (MQ=255)
                                                                                                ccTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGc     >  2:2893163/1‑100 (MQ=255)
                                                                                                  ttATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCgg   <  2:1732467/100‑1 (MQ=255)
                                                                                                   tATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGt  <  2:3226694/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGT  >  NC_000913/4587792‑4587990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.