New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4623777137 (1.110)10 (0.090) 6/164 NT 7.2% coding (341/1017 nt) lplA lipoate‑protein ligase A
?NC_000913 = 4623789 133 (1.170)coding (329/1017 nt) lplA lipoate‑protein ligase A
Rejected: Frequency below cutoff threshold.

Only 100 of 176 total aligned reads displayed.

CGCGATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGAT  >  NC_000913/4623679‑4623876
                                                                                                  |                                                                                                   
cgcgATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGAc                                                                                                    >  2:1112612/1‑100 (MQ=255)
   gATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGcc                                                                                                 <  2:2098648/100‑1 (MQ=255)
   gATCTGTGGTTTCGCGAGAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGcc                                                                                                 <  1:2831467/100‑1 (MQ=255)
      cTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAg                                                                                              <  1:870365/100‑1 (MQ=255)
      cTTTGGTTTCGCGATAGGCCGAGCCTGAGACGTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAg                                                                                              >  1:132412/1‑100 (MQ=255)
       tttGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGCCGATTCGGCGCTGCAGCCGAgc                                                                                             >  2:771110/1‑100 (MQ=255)
       tttGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAgc                                                                                             <  2:1726053/100‑1 (MQ=255)
        ttGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAgcg                                                                                            >  2:252273/1‑100 (MQ=255)
        ttGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAgcg                                                                                            <  1:294652/100‑1 (MQ=255)
               cgcgATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTtcag                                                                                     >  1:525058‑M2/1‑96 (MQ=255)
                 cgATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTtcagcg                                                                                   <  2:3059045‑M2/100‑7 (MQ=255)
                 cgATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTtcagcg                                                                                   <  1:327084‑M2/100‑7 (MQ=255)
                   aTAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGAacgcgctcggcgtcagcgcc                                                                                 <  2:2211535‑M1/100‑21 (MQ=255)
                     aGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGAacgcgctcggcgtcagcgccga                                                                               <  2:3241314‑M1/100‑23 (MQ=255)
                     aGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGAacgcgctcggcgtcagcgccga                                                                               <  2:3232774‑M1/100‑23 (MQ=255)
                     aGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGAacgcgctcggcgtcagcgcc                                                                                 <  1:1406695‑M1/98‑21 (MQ=255)
                       gCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTg                                                                              >  1:3199833/1‑99 (MQ=255)
                       gCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGa                                                                             >  2:1622060/1‑100 (MQ=255)
                        ccGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAg                                                                            <  2:3156453/100‑1 (MQ=255)
                        ccGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAg                                                                            <  2:1781409/100‑1 (MQ=255)
                        ccGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAg                                                                            <  1:1337729/100‑1 (MQ=255)
                         cGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGc                                                                           <  2:907335/100‑1 (MQ=255)
                         cGAGCCTGAGACGGTGCGGTCGCCTTCGACGCTTTTCACCACCAGATCGTTACGTCCGGACGCTTTGGCGCTGAacgcgctcgccgtcagcgccg                                                                                <  1:676518‑M1/95‑22 (MQ=255)
                            gCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGcaca                                                                        >  2:217374/1‑100 (MQ=255)
                             ccTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACaa                                                                       >  1:1854878/1‑100 (MQ=255)
                              cTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACaa                                                                       >  1:926703/1‑99 (MQ=255)
                              cTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAAt                                                                      >  2:1410893/1‑100 (MQ=255)
                              cTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAAt                                                                      >  1:74946/1‑100 (MQ=255)
                               tGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATc                                                                     >  2:754788/1‑100 (MQ=255)
                                gagaCTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCg                                                                    >  1:1050310/1‑100 (MQ=255)
                                  gaCTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGAc                                                                  <  1:1276543/100‑1 (MQ=255)
                                    cTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGt                                                                >  2:268445/1‑100 (MQ=255)
                                      ttGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTgg                                                              >  1:1594255/1‑100 (MQ=255)
                                       tGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGTGCGTTCAGCGCATTGAGCACAATCGACGTGga                                                             <  2:3242322/100‑1 (MQ=255)
                                       tGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGga                                                             <  1:2306149/100‑1 (MQ=255)
                                        gCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGgag                                                            <  2:2744066/100‑1 (MQ=255)
                                        gCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGgag                                                            <  2:3342943/100‑1 (MQ=255)
                                         cGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGgaga                                                           >  1:3168464/1‑100 (MQ=255)
                                         cGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACCCCCAGCGCATTCAGCGCATTGAGCACAATCGACGTGga                                                             >  1:287496/1‑98 (MQ=255)
                                          ggTCGCCTGCGACGGTTTGCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGAt                                                          <  1:1123202/100‑1 (MQ=255)
                                               ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                                     >  1:2475413/1‑100 (MQ=255)
                                               ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                                     >  2:334702/1‑100 (MQ=255)
                                               ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                                     >  2:1758194/1‑100 (MQ=255)
                                               ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                                     >  1:1813909/1‑100 (MQ=255)
                                               ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                                     <  2:2610904/100‑1 (MQ=255)
                                                 tccGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTa                                                   <  1:2071959/98‑1 (MQ=255)
                                                  tCGACGGTTTTCACCACCAGATCGGTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTAt                                                  <  2:2253371/100‑1 (MQ=255)
                                                   cGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATc                                                 >  2:1670723/1‑100 (MQ=255)
                                                    gACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGtagatcgg                                                >  1:2531988/1‑93 (MQ=255)
                                                    gACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCg                                                <  2:188367/100‑1 (MQ=255)
                                                    gACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCg                                                <  1:2264067/100‑1 (MQ=255)
                                                       ggTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTAc                                             >  2:2122726/1‑100 (MQ=255)
                                                          tttCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTcc                                          >  1:82375/1‑100 (MQ=255)
                                                             caccacCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGc                                       >  1:811042/1‑100 (MQ=255)
                                                              accaccAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCt                                      >  1:1026421/1‑100 (MQ=255)
                                                               ccaccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCtt                                     >  1:2147819/1‑100 (MQ=255)
                                                               ccacaaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGAAGAGGAGATAGTTTTATCGTACTCCGGCt                                      >  1:1850657/1‑99 (MQ=255)
                                                                 accaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgc                                   >  2:154805/1‑100 (MQ=255)
                                                                  ccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgcc                                  <  1:3077345/100‑1 (MQ=255)
                                                                   cggATCGTTACGTCCGGACGCTTCGGAGCTGCCGCCGAGCGCGGTCAGCGCATTGAGCACAAGCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgcc                                  <  1:1204939/97‑1 (MQ=255)
                                                                   caGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgcca                                 >  1:511897/1‑100 (MQ=255)
                                                                    aGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccag                                >  1:2391733/1‑100 (MQ=255)
                                                                    aGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccag                                >  2:1595783/1‑100 (MQ=255)
                                                                    aGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccag                                >  1:1927792/1‑100 (MQ=255)
                                                                    aGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccag                                <  1:62430/100‑1 (MQ=255)
                                                                     gATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTGTCGTACTCCGGCTTgccagc                               <  1:338791/100‑1 (MQ=255)
                                                                      aTCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcc                              >  1:1471267/1‑100 (MQ=255)
                                                                       tCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcca                             <  2:115068/100‑1 (MQ=255)
                                                                       tCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcca                             <  2:1927803/100‑1 (MQ=255)
                                                                         gTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATa                           >  2:1314632/1‑100 (MQ=255)
                                                                           tACGTCCGGACGCTTCGGCGCTGACTCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATaaa                         <  2:416763/100‑1 (MQ=255)
                                                                           tACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATaaa                         >  1:1763956/1‑100 (MQ=255)
                                                                                ccGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaa                    >  1:3410053/1‑100 (MQ=255)
                                                                                ccGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaa                    >  1:2694876/1‑100 (MQ=255)
                                                                                ccGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaa                    <  1:983475/100‑1 (MQ=255)
                                                                                ccGGACGCTTCGGCGCTGACGCAGAGCGCGTTCAGCGCATTGAGCACAATCGCCGTGGAGATAGTTATATCGTACTCCGGCTTGCCAGCCATAAAGGTaa                    >  1:1926188/1‑100 (MQ=255)
                                                                                      gCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAgg              <  1:1510472/100‑1 (MQ=255)
                                                                                      gCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAgg              <  2:68494/100‑1 (MQ=255)
                                                                                      gCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAgg              <  1:3363017/100‑1 (MQ=255)
                                                                                      gCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAgg              <  2:1014389/100‑1 (MQ=255)
                                                                                       cTTCGGCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggc             <  2:1378500‑M2/100‑77 (MQ=255)
                                                                                       cTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGt             >  1:265379/1‑100 (MQ=255)
                                                                                       cTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGt             <  2:1050313/100‑1 (MQ=255)
                                                                                        ttCGGCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggcc            >  1:1378494‑M2/1‑23 (MQ=255)
                                                                                        ttCGGCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcg               <  1:1268752‑M2/97‑75 (MQ=255)
                                                                                         tCGGCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggcct           <  2:3232774‑M2/100‑79 (MQ=255)
                                                                                          cGGCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggccta          <  1:1574180‑M2/100‑80 (MQ=255)
                                                                                          cGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTAtt          >  2:2919746/1‑100 (MQ=255)
                                                                                           ggCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgctctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggcctat         <  1:1454282‑M2/100‑81 (MQ=255)
                                                                                           ggCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggcctat         <  2:2211535‑M2/100‑81 (MQ=255)
                                                                                           ggCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTg         <  1:3051697/100‑1 (MQ=255)
                                                                                            gcgcTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGc        <  2:1471273/100‑1 (MQ=255)
                                                                                            gcgcTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGc        <  2:1167732/100‑1 (MQ=255)
                                                                                             cgcTGAacgcgctcggcgtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggcctatcg       <  2:3059045‑M1/100‑95 (MQ=255)
                                                                                             cgcTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGcc       >  2:590009/1‑100 (MQ=255)
                                                                                              gcTGAacgcgctcggcgtcagggccgaagcgtccggacgtaacgatctggtggtgaaagccgtcgaaggcgaccgcaaagtctcaggctcggcctatcgc      <  1:740692‑M1/100‑96 (MQ=255)
                                                                                               cTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTACCAGCCATAAAGGTAAAGCAGGTATTGCCga     >  2:319266/1‑100 (MQ=255)
                                                                                                tGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCgag    >  2:978569/1‑100 (MQ=255)
                                                                                                 gACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCgaga   >  1:2643598/1‑100 (MQ=255)
                                                                                                  aCGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGAt  <  1:1441267/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
CGCGATCTTTGGTTTCGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGAT  >  NC_000913/4623679‑4623876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.