New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4623777137 (1.110)10 (0.090) 6/164 NT 7.2% coding (341/1017 nt) lplA lipoate‑protein ligase A
?NC_000913 = 4623789 133 (1.170)coding (329/1017 nt) lplA lipoate‑protein ligase A
Rejected: Frequency below cutoff threshold.

Only 100 of 161 total aligned reads displayed.

CGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCG  >  NC_000913/4623694‑4623888
                                                                                               |                                                                                                   
       ggCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTg                                                                                          >  2:1631467/1‑100 (MQ=255)
        gCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTg                                                                                          >  1:3199833/1‑99 (MQ=255)
         ccGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAg                                                                                        <  1:1337729/100‑1 (MQ=255)
         ccGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAg                                                                                        <  2:1781409/100‑1 (MQ=255)
         ccGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAg                                                                                        <  2:3156453/100‑1 (MQ=255)
          cGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGc                                                                                       <  2:907335/100‑1 (MQ=255)
          cGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGc                                                                                       <  2:2446241/100‑1 (MQ=255)
             gCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGcaca                                                                                    >  2:217374/1‑100 (MQ=255)
              ccTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACaa                                                                                   >  1:1854878/1‑100 (MQ=255)
               cTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAAt                                                                                  >  1:74946/1‑100 (MQ=255)
                 gagaCTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCg                                                                                >  1:1050310/1‑100 (MQ=255)
                     cTTTGCGGTCGCCTTCGAAGGTTTTGACCACCAGGTCGTTACGTCCGGACGCTTCGGCGCTGACACCGAGCGCGTTCAGCGCATTGAGCACAATCGACg                                                                             >  1:299783/1‑99 (MQ=255)
                       ttGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTgg                                                                          >  1:1594255/1‑100 (MQ=255)
                        tGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGga                                                                         <  2:977911/100‑1 (MQ=255)
                         gCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGgag                                                                        <  2:2808582/100‑1 (MQ=255)
                         gCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGgag                                                                        <  2:3342943/100‑1 (MQ=255)
                          cGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGgaga                                                                       >  1:3382508/1‑100 (MQ=255)
                          cGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGgaga                                                                       >  1:3168464/1‑100 (MQ=255)
                           ggTCGCCTGCGACGGTTTGCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGAt                                                                      <  1:1123202/100‑1 (MQ=255)
                            gTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATa                                                                     >  2:3393781/1‑100 (MQ=255)
                              cGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAg                                                                    >  1:911117/1‑99 (MQ=255)
                                ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                                                 >  1:1813909/1‑100 (MQ=255)
                                ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                                                 >  2:1758194/1‑100 (MQ=255)
                                ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                                                 <  2:2610904/100‑1 (MQ=255)
                                ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                                                 >  1:1328979/1‑100 (MQ=255)
                                ccTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGttt                                                                 >  1:2475413/1‑100 (MQ=255)
                                  ttCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTa                                                               <  2:55103/100‑1 (MQ=255)
                                  tccGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTa                                                               <  1:2071959/98‑1 (MQ=255)
                                   tCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTAt                                                              >  2:3198444/1‑100 (MQ=255)
                                   tCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTAt                                                              >  1:188366/1‑100 (MQ=255)
                                   tCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTAt                                                              <  1:3343823/100‑1 (MQ=255)
                                   tCGACGGTTTTCACCACCAGATCGGTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTAt                                                              <  2:2253371/100‑1 (MQ=255)
                                    cGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATc                                                             >  2:1670723/1‑100 (MQ=255)
                                     gACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGtagatcgg                                                            >  1:2531988/1‑93 (MQ=255)
                                     gACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCg                                                            <  1:2264067/100‑1 (MQ=255)
                                     gACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCg                                                            <  2:188367/100‑1 (MQ=255)
                                       cGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTa                                                          >  2:1763073/1‑100 (MQ=255)
                                        ggTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTAc                                                         >  1:556723/1‑100 (MQ=255)
                                        ggTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTAc                                                         >  2:2122726/1‑100 (MQ=255)
                                        ggTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTAc                                                         <  2:2098980/100‑1 (MQ=255)
                                         gTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACt                                                        >  1:2607027/1‑100 (MQ=255)
                                         gTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACt                                                        >  2:303755/1‑100 (MQ=255)
                                          ttttCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTc                                                       >  2:3342420/1‑100 (MQ=255)
                                           tttCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTcc                                                      >  1:82375/1‑100 (MQ=255)
                                             tCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCgg                                                    >  1:771727/1‑100 (MQ=255)
                                              caccacCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGc                                                   >  2:983477/1‑100 (MQ=255)
                                              caccacCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGc                                                   <  2:2713045/100‑1 (MQ=255)
                                               accaccAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCt                                                  >  1:1026421/1‑100 (MQ=255)
                                                ccaccaGGTCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGc                                                   <  1:1978263/98‑1 (MQ=255)
                                                ccaccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCtt                                                 >  1:2147819/1‑100 (MQ=255)
                                                ccacaaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGAAGAGGAGATAGTTTTATCGTACTCCGGCt                                                  >  1:1850657/1‑99 (MQ=255)
                                                  accaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgc                                               >  2:154805/1‑100 (MQ=255)
                                                   ccaGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgcc                                              <  1:3077345/100‑1 (MQ=255)
                                                    caGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgcca                                             >  2:1441273/1‑100 (MQ=255)
                                                    caGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgcca                                             >  1:511897/1‑100 (MQ=255)
                                                     aGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccag                                            >  1:2391733/1‑100 (MQ=255)
                                                     aGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccag                                            >  1:1927792/1‑100 (MQ=255)
                                                     aGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGAGAGTTTTATCGTACTCCGGCTTgccag                                            >  2:3178428/1‑100 (MQ=255)
                                                      gATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTGTCGTACTCCGGCTTgccagc                                           <  1:338791/100‑1 (MQ=255)
                                                       aTCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcc                                          >  1:1471267/1‑100 (MQ=255)
                                                       aTCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcc                                          <  2:1590184/100‑1 (MQ=255)
                                                        tCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTgccagcca                                         <  2:1927803/100‑1 (MQ=255)
                                                         cGTTACGTTCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTCTATCGTACTCCGGCTTgcgcgcca                                         >  1:1632706/1‑99 (MQ=255)
                                                                 ccGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaa                                >  1:93356/1‑100 (MQ=255)
                                                                 ccGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaa                                >  1:2694876/1‑100 (MQ=255)
                                                                 ccGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTaa                                <  1:983475/100‑1 (MQ=255)
                                                                   ggACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAg                              <  2:3238158/100‑1 (MQ=255)
                                                                   ggACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAg                              >  2:1390033/1‑100 (MQ=255)
                                                                    gACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGc                             >  2:115103/1‑100 (MQ=255)
                                                                     cgcgctCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCa                            >  1:1167728/6‑100 (MQ=255)
                                                                      cGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTGTATAGAACTCAGGCTTGCCAGCCATAAAGGTAAAACAg                           >  1:813959/1‑100 (MQ=255)
                                                                       gCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAgg                          <  2:1014389/100‑1 (MQ=255)
                                                                       gCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAgg                          <  1:1510472/100‑1 (MQ=255)
                                                                       gCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAgg                          <  2:68494/100‑1 (MQ=255)
                                                                       gCTCCGGCGCGGACGCCGAGCGCGTTCAGCGCGTTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAgg                          <  2:768010/100‑1 (MQ=255)
                                                                        cTTCGGCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggc                         <  2:1378500‑M2/100‑77 (MQ=255)
                                                                        cTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTACCGCAgg                          >  2:1136360/1‑99 (MQ=255)
                                                                        cTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGt                         <  2:1050313/100‑1 (MQ=255)
                                                                        cTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGt                         >  1:265379/1‑100 (MQ=255)
                                                                         ttCGGCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcg                           <  1:1268752‑M2/97‑75 (MQ=255)
                                                                         ttCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTa                        <  2:1599867/100‑1 (MQ=255)
                                                                          tCGGCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggcct                       <  2:3241314‑M2/100‑79 (MQ=255)
                                                                           cGGCGCTGACGGCGAGCGCGTtcagcgccaaagcgtccggacgtaacgatctggtggtgaaaagcgtcgaaggcgaccgcaccgtctcaggctcg                           <  1:676518‑M2/95‑75 (MQ=255)
                                                                            ggCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgctctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggcctat                     <  1:1454282‑M2/100‑81 (MQ=255)
                                                                            ggCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggcctat                     <  2:2211535‑M2/100‑81 (MQ=255)
                                                                            ggCGCTGACGCCGAGCGCGTtcagcgccgaagcgtccggacgtaacgatctggtggtgaaaaccgtcgaaggcgaccgcaaagtctcaggctcggcct                       <  1:1406695‑M2/98‑79 (MQ=255)
                                                                            ggCGCTGAAGCCGAGCGCGTTCAGCGCATTGAGCACTATCGACGTGGAGATAGTTTTATCGTTCTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTg                     <  1:3052004/100‑1 (MQ=255)
                                                                             gcgcTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGc                    <  2:1167732/100‑1 (MQ=255)
                                                                              cgcTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGcc                   >  2:590009/1‑100 (MQ=255)
                                                                                 tGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCgag                <  1:2271991/100‑1 (MQ=255)
                                                                                    cGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATc             >  2:271074/1‑100 (MQ=255)
                                                                                     gCCCAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCg            <  1:604842/100‑1 (MQ=255)
                                                                                       cGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTg          >  2:2921618/1‑100 (MQ=255)
                                                                                        gAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTgg         <  1:1425063/100‑1 (MQ=255)
                                                                                        gAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTgg         <  2:680542/100‑1 (MQ=255)
                                                                                             cgTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAacac    >  2:2484942/1‑100 (MQ=255)
                                                                                              gTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGa        >  1:2362553/1‑95 (MQ=255)
                                                                                              gTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACAcc   >  1:453677/1‑100 (MQ=255)
                                                                                              gTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACAcc   <  1:1842964/100‑1 (MQ=255)
                                                                                               ttCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACcg  >  1:354138/1‑100 (MQ=255)
                                                                                               |                                                                                                   
CGCGATAGGCCGAGCCTGAGACTTTGCGGTCGCCTTCGACGGTTTTCACCACCAGATCGTTACGTCCGGACGCTTCGGCGCTGACGCCGAGCGCGTTCAGCGCATTGAGCACAATCGACGTGGAGATAGTTTTATCGTACTCCGGCTTGCCAGCCATAAAGGTAAAGCAGGTATTGCCGAGATCGTGGAACACCG  >  NC_000913/4623694‑4623888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.