BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 900831	NA (NA)	9 (0.090) +ATCAGCACGGTGCCTG	5/146	NT	NA	noncoding (83/87 nt)	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4080019 =	NA (NA)	9 (0.090) +ATCAGCACGGTGCCTG	5/146	NT	NA	intergenic (+50/+280)	yiiF/fdhE	putative thymol sensitivity protein, CopG family putative transcriptional regulator/formate dehydrogenase formation protein

Only 100 of 173 total aligned reads displayed.

AAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGC  >  NC_000913/900732‑900930

aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAc                                                                                                     >  1:2895945/1‑100 (MQ=255)

 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                                                                    <  1:2596448/100‑1 (MQ=255)

 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                                                                    >  2:1701277/1‑100 (MQ=255)

  gAAGTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCt                                                                                                   <  1:2352667/100‑1 (MQ=255)

      ttATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaa                                                                                               <  2:2705472/100‑1 (MQ=255)

       tATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaan                                                                                              <  1:2221490/100‑2 (MQ=255)

          gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcc                                                                                           >  1:1804009/1‑100 (MQ=255)

           cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc                                                                                          <  2:118699/100‑1 (MQ=255)

           cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc                                                                                          >  1:2926153/1‑100 (MQ=255)

            aCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccc                                                                                         <  1:654211/100‑1 (MQ=255)

            aCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccc                                                                                         >  1:1574397/1‑100 (MQ=255)

            aCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccc                                                                                         >  2:1055009/1‑100 (MQ=255)

             cTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccccc                                                                                        <  1:1914816/100‑1 (MQ=255)

             cTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccccc                                                                                        >  2:3091237/1‑100 (MQ=255)

              tATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccccc                                                                                       >  1:1709258/1‑100 (MQ=255)

                tGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCgg                                                                                     >  2:1155907/1‑100 (MQ=255)

                 ntAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGc                                                                                    >  1:1455866/2‑100 (MQ=255)

                    ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                                                                 >  2:2453501/1‑100 (MQ=255)

                    ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                                                                 >  2:1283352/1‑100 (MQ=255)

                     gCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAAt                                                                                <  1:285227/100‑1 (MQ=255)

                       cGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGAGACTTAACAGACCTACAAAACCCCCCGGCGAATGt                                                                              >  1:2362442/1‑100 (MQ=255)

                        ggATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTa                                                                             >  2:2996991/1‑100 (MQ=255)

                        ggATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTa                                                                             >  1:3069297/1‑100 (MQ=255)

                         gATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTAc                                                                            <  2:1121904/100‑1 (MQ=255)

                          aTAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACg                                                                           >  2:602157/1‑100 (MQ=255)

                            aaGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCa                                                                         >  1:2589256/1‑100 (MQ=255)

                              ggCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGCATGTACGCAGc                                                                       >  1:1543335/1‑100 (MQ=255)

                              ggCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGc                                                                       >  1:1504012/1‑100 (MQ=255)

                                cGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGccn                                                                     <  1:1105799/100‑2 (MQ=255)

                                cGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCca                                                                     >  1:45064/1‑100 (MQ=255)

                                cGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCca                                                                     >  1:2524763/1‑100 (MQ=255)

                                cGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCca                                                                     <  2:1771304/100‑1 (MQ=255)

                                   ccccGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAt                                                                  >  1:1311493/1‑100 (MQ=255)

                                       gccgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAAt                                                              <  2:222152/100‑1 (MQ=255)

                                         cgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAAttt                                                            <  2:192539/100‑1 (MQ=255)

                                          gcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTc                                                           >  2:2675999/1‑100 (MQ=255)

                                             tCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGcc                                                        <  2:1425850/100‑1 (MQ=255)

                                                ggCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg                                                          <  1:2155354/95‑1 (MQ=255)

                                                ggCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGtt                                                     >  2:741487/1‑100 (MQ=255)

                                                 gCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACATACAAAACCGCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTc                                                    <  1:2112777/100‑1 (MQ=255)

                                                  cacaGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg                                                   >  1:105732/1‑100 (MQ=255)

                                                   acaGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg                                                   <  1:3163903/99‑1 (MQ=255)

                                                   acaGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATAAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg                                                   <  1:1992522/99‑1 (MQ=255)

                                                    caGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGaa                                                 >  2:1580970/1‑100 (MQ=255)

                                                    caGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGaa                                                 >  2:3408394/1‑100 (MQ=255)

                                                     aGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAAt                                                <  1:1617921/100‑1 (MQ=255)

                                                      ggCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATg                                               >  2:3182662/1‑100 (MQ=255)

                                                        cACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGcc                                             >  2:901894/1‑100 (MQ=255)

                                                        cACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGcc                                             <  2:378289/100‑1 (MQ=255)

                                                        cACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGcc                                             <  2:2099022/100‑1 (MQ=255)

                                                         aCCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCa                                            >  2:1257982/1‑100 (MQ=255)

                                                          ccGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAg                                           <  1:1868511/100‑1 (MQ=255)

                                                              gCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataa                                       >  2:1559299‑M1/1‑38 (MQ=255)

                                                               cTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCtt                                      >  2:810872/1‑100 (MQ=255)

                                                                 gATGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaatt                                    <  1:1559560‑M1/100‑66 (MQ=255)

                                                                 gATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTg                                    <  1:142414/100‑1 (MQ=255)

                                                                 gATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCCGCGAATCTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTg                                    <  2:2928754/100‑1 (MQ=255)

                                                                  aTGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattc                                   >  2:196234‑M1/1‑34 (MQ=255)

                                                                   tGTCTGATGCGACGCTGGCGCGTCTTATCAGACatcagcacggtgcctgtgccggatgcggcggggacgccttatccggcctacatagtgcataaattct                                  >  2:694112‑M1/1‑33 (MQ=255)

                                                                    gTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTgcgc                                 >  1:1007999/1‑100 (MQ=255)

                                                                     tCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCt                                <  1:1257978/100‑1 (MQ=255)

                                                                     tCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCt                                >  1:2855868/1‑100 (MQ=255)

                                                                      cTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTc                               >  1:2146548/1‑100 (MQ=255)

                                                                      cTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTc                               <  1:2549150/100‑1 (MQ=255)

                                                                       tGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTgcgc                                 >  1:2792791/1‑97 (MQ=255)

                                                                       tGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCg                              <  2:531092/100‑1 (MQ=255)

                                                                       tGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCg                              <  1:2591447/100‑1 (MQ=255)

                                                                       tGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCg                              <  1:943559/100‑1 (MQ=255)

                                                                       tGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCg                              <  2:956001/100‑1 (MQ=255)

                                                                        gATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGa                             <  2:1396398/100‑1 (MQ=255)

                                                                         aTGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGAt                            <  1:913424/100‑1 (MQ=255)

                                                                          tGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATc                           >  2:182687/1‑100 (MQ=255)

                                                                          tGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATc                           <  1:721924/100‑1 (MQ=255)

                                                                           gCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCa                          <  2:1231569/100‑1 (MQ=255)

                                                                           gCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCa                          <  2:2971920/100‑1 (MQ=255)

                                                                              aCGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGAc                       <  1:407230/100‑1 (MQ=255)

                                                                              aCGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGAc                       <  1:1490222/100‑1 (MQ=255)

                                                                              aCGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGAc                       >  2:1717838/1‑100 (MQ=255)

                                                                               cGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACg                      >  2:1501952/1‑100 (MQ=255)

                                                                                 cTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGca                    <  2:764667/100‑1 (MQ=255)

                                                                                 cTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGca                    <  1:304920/100‑1 (MQ=255)

                                                                                 cTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGca                    <  2:2847200/100‑1 (MQ=255)

                                                                                    gcgcGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGcatca                 >  2:2589795/1‑100 (MQ=255)

                                                                                    gcgcGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGcatca                 >  2:63120/1‑100 (MQ=255)

                                                                                     cgcgTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGcatcat                >  1:3228692/1‑100 (MQ=255)

                                                                                        gTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAg             <  2:2912819/100‑1 (MQ=255)

                                                                                        gTCTTATCAGACCTAC‑AAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGc            <  2:1516733/100‑1 (MQ=255)

                                                                                          cTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCg           <  2:1804017/100‑1 (MQ=255)

                                                                                          cTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCg           >  2:1914167/1‑100 (MQ=255)

                                                                                          cTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCg           >  1:869521/1‑100 (MQ=255)

                                                                                             aTCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTca        >  1:1336140/1‑100 (MQ=255)

                                                                                             aTCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTca        >  1:2079510/1‑100 (MQ=255)

                                                                                              tCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCTCCGTCCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTccg       >  2:809949/1‑98 (MQ=255)

                                                                                              tCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcag       >  2:1651950/1‑100 (MQ=255)

                                                                                                aaaCCTACAAATCCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACTCATCATCAGCGTcagca     <  1:817555/98‑1 (MQ=255)

                                                                                                aGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagca     >  2:2296975/1‑100 (MQ=255)

                                                                                                 gACCTACAAAACCCCCCGGCGGATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCTAGCGCTTTGCGCTCGATCAGACGCATCATCAgn            <  1:2053310/92‑2 (MQ=255)

                                                                                                 gACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTcagcag    >  1:3358190/1‑100 (MQ=255)

                                                                                                  aCCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAgg   <  2:1574404/100‑1 (MQ=255)

                                                                                                   ccTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGc  >  2:3090085/1‑100 (MQ=255)

AAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCGAATGCCAGCGCTTTGCGCTCGATCAGACGCATCATCAGCGTCAGCAGGC  >  NC_000913/900732‑900930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.