New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1508794NA (NA)7 (0.060) 7/166 NT NA noncoding (4/33 nt) REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 1508823 NA (NA)noncoding (33/33 nt) REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 158 total aligned reads displayed.

AGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCGCAAACC  >  NC_000913/1508698‑1508893
                                                                                                |                                                                                                   
aGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgcc                                                                                                  <  1:1035280‑M1/100‑4 (MQ=255)
aGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgcc                                                                                                  >  1:968772‑M1/1‑97 (MQ=255)
    cGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccgg                                                                                                >  1:2047832‑M1/1‑93 (MQ=255)
    cGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGt                                                                                              >  1:1705275/1‑100 (MQ=255)
       aTGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAg                                                                                           >  1:2171829/1‑100 (MQ=255)
       aTGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAg                                                                                           <  2:3272157/100‑1 (MQ=255)
         gAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGc                                                                                         <  1:3122344/100‑1 (MQ=255)
          atctgctgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTGCTGGTTACTCTCAACTTATTGAATCTGCAGGATATTGCCTGCCGGGTAAGGCg                                                                                        <  2:242637/98‑1 (MQ=255)
          aGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCg                                                                                        >  1:429720/1‑100 (MQ=255)
          aGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCg                                                                                        >  1:3239498/1‑100 (MQ=255)
              gctgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAc                                                                                    >  1:2949503/1‑100 (MQ=255)
                tgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgc                                                                                  >  2:1312050/1‑100 (MQ=255)
                tgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgc                                                                                  <  1:69640/100‑1 (MQ=255)
                 gAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgcc                                                                                 >  1:15976/1‑100 (MQ=255)
                 gAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgcc                                                                                 >  2:2583449/1‑100 (MQ=255)
                  aaaaCATTGCTGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATTATATTGCCTGCCGGGTAAGGCGTTAcgccg                                                                                <  1:2251202/100‑1 (MQ=255)
                   aaaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgccgc                                                                               >  1:2804803/1‑100 (MQ=255)
                    aaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCa                                                                              <  1:333419/100‑1 (MQ=255)
                     aCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCAt                                                                             <  1:2564503/100‑1 (MQ=255)
                      cATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccggatgcggcgtaacgccttacc                                                                            <  1:542269‑M1/100‑26 (MQ=255)
                       aTTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCC                                                                           <  1:1223004‑M2/100‑1 (MQ=255)
                          gCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGC                                                                        <  2:2269990‑M2/100‑1 (MQ=255)
                           ccGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCa                                                                       <  2:3146109‑M2/100‑2 (MQ=255)
                           ccGAAGCGAAAAGGGTAAAACGCCAGGTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGC                                                                        <  2:2077664‑M2/99‑1 (MQ=255)
                             gAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATc                                                                     <  1:1973696/100‑1 (MQ=255)
                             gAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATc                                                                     <  1:1003084/100‑1 (MQ=255)
                               aGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccggatgcggcgtaacgccttacccggcaggca                                                                   <  1:1795253‑M1/100‑35 (MQ=255)
                                 ctaaaaGGGTAAAACGCCATTTTTCGGTTTACTCACAACTTATTTAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCaa                                                                   >  1:2214875/3‑98 (MQ=39)
                                  gAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAAt                                                                 >  1:3257931/1‑99 (MQ=255)
                                  gAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATg                                                                >  2:832126/1‑100 (MQ=255)
                                  gAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATg                                                                >  2:237294/1‑100 (MQ=255)
                                        ggTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccggatgcggcgtaacgccttacccggcaggcaatatcatgc                                                          <  2:2832961‑M1/100‑44 (MQ=255)
                                        ggTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCaa                                                          >  2:2922763/1‑100 (MQ=255)
                                         gTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAAc                                                         >  2:2097014/1‑100 (MQ=255)
                                         gTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAAc                                                         <  2:1465464/100‑1 (MQ=255)
                                         gTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAAc                                                         >  2:773929/1‑100 (MQ=255)
                                           aaaaCGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccggatgcggcgtaacgccttacccggcaggcaatatcatgcaga                                                       <  2:3386416‑M1/100‑47 (MQ=255)
                                            aaaCGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGtt                                                      >  2:1633862/1‑100 (MQ=255)
                                            aaaCGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGtt                                                      >  1:1816804/1‑100 (MQ=255)
                                             aaCGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTg                                                     <  2:2184964/100‑1 (MQ=255)
                                               cGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTc                                                   >  2:2729155/1‑100 (MQ=255)
                                               cGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTc                                                   >  1:576262/1‑100 (MQ=255)
                                               cGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTc                                                   <  2:1280415/100‑1 (MQ=255)
                                                 ccAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTccc                                                 >  2:1355820/1‑100 (MQ=255)
                                                     ttttCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCtt                                             <  2:1705283/100‑1 (MQ=255)
                                                      tttCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccggatgcggcgtaacgccttacccggcaggcaatatcatgcagattcaataagtt                                            <  2:2963942‑M1/100‑58 (MQ=255)
                                                      tttCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTc                                            >  2:3188253/1‑100 (MQ=255)
                                                        tCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTG                                          <  1:2094910‑M1/100‑1 (MQ=255)
                                                           ggTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTT                                       >  2:2602766‑M1/1‑100 (MQ=255)
                                                           ggTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTT                                       <  1:39392‑M1/100‑1 (MQ=255)
                                                           ggTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTT                                       <  2:1508020‑M1/100‑1 (MQ=255)
                                                            gTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTT                                      >  2:124095‑M1/1‑100 (MQ=255)
                                                             ttACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTG                                     >  2:3146115‑M1/1‑100 (MQ=255)
                                                             ttACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTG                                     <  2:2996924‑M1/100‑1 (MQ=255)
                                                              tACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGC                                    >  1:1389137‑M1/1‑100 (MQ=255)
                                                                cTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGC                                  <  2:1193490‑M1/100‑1 (MQ=255)
                                                                cTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGC                                  >  2:57801‑M1/1‑100 (MQ=255)
                                                                  cacaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGTATCAAATGACTCAACGTTGTCCCGCTTCTTGATTGCGCGA                                >  2:87819‑M1/1‑100 (MQ=255)
                                                                  cacaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGA                                >  2:3186962‑M1/1‑100 (MQ=255)
                                                                  cacaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGA                                >  1:253777‑M1/1‑100 (MQ=255)
                                                                  cacaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGA                                >  1:2599410‑M1/1‑100 (MQ=255)
                                                                  cacaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGA                                >  1:880387‑M1/1‑100 (MQ=255)
                                                                   acaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAt                               >  2:1486181/1‑100 (MQ=255)
                                                                    caACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAtt                              >  2:1566472/1‑100 (MQ=255)
                                                                     aaCTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAttt                             >  2:500160/1‑100 (MQ=255)
                                                                      aCTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAtttt                            >  2:3326307/1‑100 (MQ=255)
                                                                       cTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAttttt                           <  2:1928926/100‑1 (MQ=255)
                                                                        ttATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTg                          <  1:441864/100‑1 (MQ=255)
                                                                         tATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGc                         >  2:67203/1‑100 (MQ=255)
                                                                         tATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGc                         <  2:3028447/100‑1 (MQ=255)
                                                                         tATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGCTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAttttt                           >  1:1823852/1‑98 (MQ=255)
                                                                            tGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAg                      >  2:1444034/1‑100 (MQ=255)
                                                                             gAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGt                     >  2:2155778/1‑100 (MQ=255)
                                                                               aTCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTaa                   >  2:203281/1‑100 (MQ=255)
                                                                                tCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCaggcaatatcatgcagattcaataagttgtgagtaaccagaaaactggcgtttt                  <  2:3386416‑M2/100‑55 (MQ=255)
                                                                                tCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTaaa                  <  2:3055584/100‑1 (MQ=255)
                                                                                 cTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTaaaa                 >  1:788511/1‑100 (MQ=255)
                                                                                  tGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTaaaaa                >  2:2658951/1‑100 (MQ=255)
                                                                                   gCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCaggcaatatcatgcagattcaataagttgtgagtaaccagaaaactggcgttttacc               <  2:2832961‑M2/100‑58 (MQ=255)
                                                                                   gCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAAt               >  2:181859/1‑100 (MQ=255)
                                                                                   gCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAAt               >  1:626334/1‑100 (MQ=255)
                                                                                   gCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAAt               >  2:3344103/1‑100 (MQ=255)
                                                                                    cATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATg              >  2:2276085/1‑100 (MQ=255)
                                                                                     aTGATATTGCCTTCCGTGTAAGGCTTTACGCCGCATCCGGCATCATATGACTCAACGTTGTCCCGCTTCTTTTTTGCGCGATTTTTGCCAGTAAAAATg              <  1:3243822/99‑1 (MQ=255)
                                                                                      tGATATTGCCTGCCTGGTAAGACGTGACGCCGAATCAGGCACCAAATGACTCAACCTTGACCAGCTTCTGGTGTGCGCGTTTTTTCCCATAAAAAATGc             >  1:560989/1‑99 (MQ=255)
                                                                                      tGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCt            <  1:1575888‑M2/100‑2 (MQ=255)
                                                                                       gATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtc           <  2:1690414‑M2/100‑3 (MQ=255)
                                                                                        atatTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcg          <  1:2844257‑M2/100‑4 (MQ=255)
                                                                                         tatTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgc         <  2:955699‑M2/100‑5 (MQ=255)
                                                                                          atTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgcg        >  1:357081‑M2/1‑95 (MQ=255)
                                                                                           ttGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAgcatttttactggcaaaaatcgcgc       <  1:3041586‑M1/100‑26 (MQ=255)
                                                                                           ttGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgcgc       >  1:3309809‑M2/1‑94 (MQ=255)
                                                                                            tgcctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAgcatttttactggcaaaaatcgcgca      <  1:1284218‑M1/100‑27 (MQ=255)
                                                                                              cctgccGGGTAAGGCGTTACGCCGCATCCGGCaggcaatatcatgcagattcaataagttgtgagtaaccagaaaactggcgttttacccttttcgcttc    <  2:1312772‑M2/100‑69 (MQ=255)
                                                                                               ctggcGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgcgcaaac   >  2:775215‑M2/1‑90 (MQ=255)
                                                                                               ctgccGGGTAAGGCGTTACGCCGCATCCGGCaggcaatatcatgcagattcaataagttgtgagtaaccagaaaactggcgttttacccttttcgcttcg   <  1:20499‑M2/100‑70 (MQ=255)
                                                                                               ctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgcgcaaac   <  2:1967851‑M2/100‑11 (MQ=255)
                                                                                                tgccggatgcggcgtaacgccttacccggcaggcaatatcctgcagattcaataagttgtgagtaaccagaaaactggcgttttacccttttcgcttcgg  >  1:277981‑M1/1‑1 (MQ=255)
                                                                                                tgccggatgcggcgtaacgccttacccggcaggcaatatcatgcagattcaataagttgtgagtaaccagaaaactggcgttttacccttttcgcttcgg  >  2:14313‑M1/1‑1 (MQ=255)
                                                                                                tgccggatgcggcgtaacgccttacccggcaggcaatatcatgcagattcaataagttgtgagtaaccagaaaactggcgttttacccttttcgcttcgg  <  1:2378986‑M1/100‑100 (MQ=255)
                                                                                                |                                                                                                   
AGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCGCAAACC  >  NC_000913/1508698‑1508893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.