New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2808135 =NA (NA)7 (0.060) 4/164 NT NA noncoding (5/84 nt) REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2808165 = NA (NA)noncoding (35/84 nt) REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences REP193 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 171 total aligned reads displayed.

ATATTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCA  >  NC_000913/2808036‑2808234
                                                                                                   |                                                                                                   
tgatgaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacg                                                                                                     <  2:3343052‑M1/1‑1 (MQ=255)
 tatTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCggg                                                                                                    <  2:1046691/100‑1 (MQ=255)
 gatgaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacgg                                                                                                    <  1:3034295‑M1/2‑1 (MQ=255)
  atTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGc                                                                                                   >  2:889733/1‑100 (MQ=255)
   ttCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCg                                                                                                  <  1:2004311/100‑1 (MQ=255)
   ttCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCg                                                                                                  >  2:3116138/1‑100 (MQ=255)
    gaatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacggcgg                                                                                                 <  1:3414376‑M1/5‑1 (MQ=255)
    gaatatgggatgaaagatagattgttaaaatgtgcgatgtggtttgtaggcatgataagacgcgccagagtcgaatcagtcattcttcacagaacggcg                                                                                                  <  1:2957121‑M1/4‑1 (MQ=255)
     cAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGa                                                                                                >  2:2889136/1‑100 (MQ=255)
     aatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGa                                                                                                >  2:715650‑M1/95‑100 (MQ=255)
     aatatgggatgaaagatagattgttgaaatgtgcgatgtggtttgtaggcatgataagacgcgcaagcgtcgcatcaggcattgtgcacagaacGGCGGa                                                                                                <  1:2941095‑M1/6‑1 (MQ=255)
       gggACAGGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGc                                                                                                   <  1:1065246/95‑1 (MQ=255)
       gggACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATa                                                                                              <  2:554693/100‑1 (MQ=255)
        ggACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGATGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATaa                                                                                             <  2:1911544/100‑1 (MQ=255)
          acacGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAgg                                                                                           <  1:1771721/100‑1 (MQ=255)
             cGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCg                                                                                         <  1:1624633/99‑1 (MQ=255)
             cGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCg                                                                                         >  2:1929914/1‑99 (MQ=255)
             cGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGt                                                                                        >  1:2216250/1‑100 (MQ=255)
             cGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGt                                                                                        >  1:2436630/1‑100 (MQ=255)
              gTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGtt                                                                                       <  1:1426447/100‑1 (MQ=255)
                tGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGtttt                                                                                     >  1:1192082/1‑100 (MQ=255)
                  aTGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTg                                                                                   >  1:2235375/1‑100 (MQ=255)
                   tGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGc                                                                                  >  1:478000/1‑100 (MQ=255)
                   tGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGc                                                                                  <  2:2660447/100‑1 (MQ=255)
                   tGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGc                                                                                  >  2:2365721/1‑100 (MQ=255)
                   tGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGc                                                                                  <  1:2552950/100‑1 (MQ=255)
                     gTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCGGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCg                                                                                <  2:2412800/100‑1 (MQ=255)
                     gTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCg                                                                                >  2:432261/1‑100 (MQ=255)
                      ttGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGc                                                                               >  2:1941974/1‑100 (MQ=255)
                      ttGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGc                                                                               >  2:1833213/1‑100 (MQ=255)
                      ttGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGc                                                                               >  2:1186158/1‑100 (MQ=255)
                         ttccgatctccaccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATc                                                                            <  2:3005144/91‑1 (MQ=255)
                         gATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATc                                                                            >  2:1049456/1‑100 (MQ=255)
                         gATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTGTATTCGGGCGGATAAGGCGTTTTTGCCGCATc                                                                            >  2:501956/1‑100 (MQ=255)
                          aTCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATcc                                                                           >  1:91381/1‑100 (MQ=255)
                           tCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccg                                                                          >  2:2195788/1‑100 (MQ=255)
                           tCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccg                                                                          >  2:1265296/1‑100 (MQ=255)
                            ttgaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATccgc                                                                         >  2:482181‑M1/72‑100 (MQ=255)
                             aaaGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATccgcc                                                                        >  1:2474093/1‑100 (MQ=255)
                              gaaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATccgccg                                                                       >  1:1463871‑M1/70‑100 (MQ=255)
                              aaGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTGTTTGCCGCATccgccg                                                                       >  1:3149745/1‑100 (MQ=255)
                               aaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGt                                                                      >  1:445793‑M1/69‑100 (MQ=255)
                               aaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGt                                                                      >  2:3294248‑M1/69‑100 (MQ=255)
                               aaatgtgcgatgtggtttgtaggcatgataagacgcgccagcgtcgcatcaggcattgtgcacagaacGGCGGATAAGGCGTTTTTGCCGCATCCGCCGt                                                                      >  1:2517016‑M1/69‑100 (MQ=255)
                               aGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGt                                                                      <  1:2333147/100‑1 (MQ=255)
                               aGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGAAATTTTTATTCGGGCGGATAAGGCGTCTTTGCCGCATCCGCCGt                                                                      >  2:1890660/1‑100 (MQ=255)
                                 cccACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTc                                                                    >  2:308403/1‑100 (MQ=255)
                                  ccaccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCt                                                                   <  1:2218407/100‑1 (MQ=255)
                                     ccaGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCtgtg                                                                <  1:2344380/100‑1 (MQ=255)
                                      cagcagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTAGTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGc                                                               <  1:474199/100‑1 (MQ=255)
                                       agcagcagTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGca                                                              <  2:162848/100‑1 (MQ=255)
                                             agTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGc                                                        >  1:265786/1‑100 (MQ=255)
                                             agTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGc                                                        <  2:3263502/100‑1 (MQ=255)
                                              gTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGcc                                                       >  1:3396626/1‑100 (MQ=255)
                                               ttCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCt                                                      <  2:2160745/100‑1 (MQ=255)
                                                 cGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGa                                                    >  1:779496/1‑100 (MQ=255)
                                                 cGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGa                                                    >  1:1563330/1‑100 (MQ=255)
                                                    tGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGc                                                 <  2:3287756/100‑1 (MQ=255)
                                                    tGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGc                                                 <  2:785500/100‑1 (MQ=255)
                                                    tGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGc                                                 <  1:2451182/100‑1 (MQ=255)
                                                       cTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTTTTTTGTATAAGGCGATTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGAc                                              >  1:98253/1‑100 (MQ=255)
                                                        tGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACg                                             >  2:2659612/1‑100 (MQ=255)
                                                         gggTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGc                                            >  2:1721653/1‑100 (MQ=255)
                                                          ggTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCt                                           <  1:1273141/100‑1 (MQ=255)
                                                              aaTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcg                                       >  1:504341/1‑100 (MQ=255)
                                                              aaTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcg                                       <  2:422550/100‑1 (MQ=255)
                                                               aTGCGGCGCTGGACGCGCAGAAGTAACTTTCCTTCGCGCGGATCAGGCGTTTCTGCCGCCTCCGCAGTTCTCTGCACAATGCCTGATGCGACGCTGgcg                                       <  1:281812/99‑1 (MQ=21)
                                                               aTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcgc                                      >  2:148372/1‑100 (MQ=255)
                                                               aTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcgc                                      >  1:3008669/1‑100 (MQ=255)
                                                               aTGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGgcgc                                      >  2:813992/1‑100 (MQ=255)
                                                                tGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGcgcg                                     <  1:117552/100‑1 (MQ=255)
                                                                   ggCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGGGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCt                                  <  1:303207/100‑1 (MQ=255)
                                                                     cgcTGGCAGCGCAGAAGTAATATATATACAGACGGATAAGGCGTTTATGCCGCATACACCGTTCTGTGCACAATGCCTGATGCAACGCTGACGCGTCtt                                 >  1:3213848/1‑99 (MQ=21)
                                                                      gcTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTAt                               <  1:842414/100‑1 (MQ=255)
                                                                      gcTGGCAGCGCAGAAGTAATTTTTAGTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTa                                <  1:671427/99‑1 (MQ=255)
                                                                       cTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATc                              <  1:1038406/100‑1 (MQ=255)
                                                                        tGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCa                             <  1:355736/100‑1 (MQ=255)
                                                                        tGGCAGCGCAGAAGTAATTTTTATTCGGGAGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCa                             <  2:1253930/100‑1 (MQ=255)
                                                                         ggCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCAt                            <  2:276719/100‑1 (MQ=255)
                                                                         ggCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCAt                            >  2:281542/1‑100 (MQ=255)
                                                                          cgatctcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATg                           <  1:2585682/94‑1 (MQ=255)
                                                                           cAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGc                          >  2:1744154/1‑100 (MQ=255)
                                                                            aGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGcc                         <  1:739900/100‑1 (MQ=255)
                                                                               gcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTAc                      <  2:424376/100‑1 (MQ=255)
                                                                               gcAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTAc                      <  2:2747180/100‑1 (MQ=255)
                                                                                cAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATgagatcg                     >  2:2585697/1‑94 (MQ=255)
                                                                                   aaGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAc                  >  1:925704/1‑100 (MQ=255)
                                                                                    aGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAAcc                 <  1:1328939/100‑1 (MQ=255)
                                                                                    aGTAATTTTTATTCGGGCGGATAAGGCGCTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCCTATCATGCCTACAAAcc                 <  1:1530394/100‑1 (MQ=255)
                                                                                      tAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACcac               <  2:2816269/100‑1 (MQ=255)
                                                                                         tttttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATc            <  2:1366409/100‑1 (MQ=255)
                                                                                         tttttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATc            >  1:1376693/1‑100 (MQ=255)
                                                                                            ttATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGca         <  1:884437/100‑1 (MQ=255)
                                                                                             tATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGcac        <  1:1007848/100‑1 (MQ=255)
                                                                                             tATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGcac        <  1:3077738/100‑1 (MQ=255)
                                                                                              aTTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGcaca       >  1:3310337/1‑100 (MQ=255)
                                                                                                 ngggCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACAttt    >  1:1580072/2‑100 (MQ=255)
                                                                                                 cGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACAttt    >  1:2605630/1‑100 (MQ=255)
                                                                                                  gggCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTc   >  2:385840/1‑100 (MQ=255)
                                                                                                   GGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTca  >  1:1927723‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATATTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAATTTTTATTCGGGCGGATAAGGCGTTTTTGCCGCATCCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCA  >  NC_000913/2808036‑2808234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.