BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3525478 =	NA (NA)	5 (0.040)	4/162	NT	NA	noncoding (1/98 nt)	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	3525508 =	NA (NA)	5 (0.040)	4/162	NT	NA	noncoding (31/98 nt)	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 168 total aligned reads displayed.

CAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCT  >  NC_000913/3525409‑3525607

caGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCt                                                                                                     >  2:2754365/1‑100 (MQ=255)

caGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCt                                                                                                     <  1:1391787/100‑1 (MQ=255)

 aGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCt                                                                                                     <  1:1773005/99‑1 (MQ=255)

 aGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTa                                                                                                    <  2:2054010/100‑1 (MQ=255)

     aTTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGAGAACGCGTTATCCGGCTAACaa                                                                                                >  2:2795411/1‑100 (MQ=255)

        gTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAAt                                                                                             <  1:1050011/100‑1 (MQ=255)

         ttCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATc                                                                                            >  1:1385868/1‑100 (MQ=255)

          tCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCg                                                                                           >  2:2333338/1‑100 (MQ=255)

          tCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCg                                                                                           <  2:719347/100‑1 (MQ=255)

           cTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGt                                                                                          >  1:2544176/1‑100 (MQ=255)

            tGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTg                                                                                         <  1:1363586/100‑1 (MQ=255)

            tGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTg                                                                                         >  1:2806547/1‑100 (MQ=255)

             gATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTg                                                                                         >  1:2445649/1‑99 (MQ=255)

             gATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGAAACGGCTTGAACGCGTTATCCGGCTAACAAAATCGTGa                                                                                        >  1:2306258/1‑100 (MQ=255)

               ttAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTTACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGaaa                                                                                      <  2:1547314/100‑1 (MQ=255)

               ttAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGaaa                                                                                      >  2:3220032/1‑100 (MQ=255)

               ttAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGaaa                                                                                      <  2:1535451/100‑1 (MQ=255)

                 gaaaaGGCGCCGAAGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTATTTATGACGGATACGGCGTGAACGCGTTATACGGCTAACAAAATAATGAAAAc                                                                                    >  1:1109033/2‑100 (MQ=25)

                 aaaaaGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAAc                                                                                    >  2:463679/1‑100 (MQ=255)

                 aaaaaGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAAc                                                                                    <  1:3197880/100‑1 (MQ=255)

                 aaaaaGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAAc                                                                                    <  2:373609/100‑1 (MQ=255)

                     aGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCaa                                                                                <  2:2179359/100‑1 (MQ=255)

                      ggCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAAt                                                                               >  2:558962/1‑100 (MQ=255)

                        cgcTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATaa                                                                             >  2:10000/1‑100 (MQ=255)

                         gcTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATaaa                                                                            >  2:2145082/1‑100 (MQ=255)

                             cGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGc                                                                        <  1:424902/100‑1 (MQ=255)

                             cGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGc                                                                        <  1:424416/100‑1 (MQ=255)

                             cGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGc                                                                        <  2:244138/100‑1 (MQ=255)

                               gcgcCTTTTCAGTTTCCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGc                                                                        <  1:2924204/98‑1 (MQ=255)

                                cgcCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCa                                                                       <  1:1661875/98‑1 (MQ=255)

                                cgcCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGa                                                                     <  2:2452396/100‑1 (MQ=255)

                                cgcCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGa                                                                     >  2:1162737/1‑100 (MQ=255)

                                   cTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAAc                                                                  >  1:2754607/1‑100 (MQ=255)

                                     tttCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAAccc                                                                >  2:2376241/1‑100 (MQ=255)

                                         aGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCAt                                                             >  1:216580/1‑99 (MQ=255)

                                         aGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATa                                                            >  2:2601793/1‑100 (MQ=255)

                                         aGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATa                                                            >  2:1359509/1‑100 (MQ=255)

                                         aGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATa                                                            >  2:1720548/1‑100 (MQ=255)

                                              gCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCATAAACCCCATAAGcc                                                        >  2:3360710/1‑99 (MQ=255)

                                               cTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCACAAACCCCATAAGCCTg                                                      >  1:2000059/1‑100 (MQ=255)

                                                tcaCAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGa                                                     >  2:601889/3‑100 (MQ=255)

                                                tGACAAAGTGCACTTGTTTATGCCGGCTACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGa                                                     >  1:882070/1‑100 (MQ=255)

                                                tGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGa                                                     >  1:2014863/1‑100 (MQ=255)

                                                 gACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGAt                                                    >  1:608060/1‑100 (MQ=255)

                                                  aCAAAGTGCTCTTGTTTATGCCGAAATCGGCGTGAACCCGTTTTCCGGCTAACAAAATCGTGACAACTCAATAAATTGCAGAAACCCCATAAGCCt                                                       <  2:2546840/96‑1 (MQ=37)

                                                  aCAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGAt                                                    <  1:351051/99‑1 (MQ=255)

                                                  aCAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATa                                                   <  1:3311866/100‑1 (MQ=255)

                                                  aCAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATa                                                   <  1:1269620/100‑1 (MQ=255)

                                                  aCAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATa                                                   <  1:859842/100‑1 (MQ=255)

                                                  aCAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATa                                                   >  1:1503311/1‑100 (MQ=255)

                                                   cAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATaa                                                  <  2:1984235/100‑1 (MQ=255)

                                                    aaaGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATaaa                                                 <  1:2948164/100‑1 (MQ=255)

                                                      aGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACa                                               <  1:558960/100‑1 (MQ=255)

                                                       gTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACAt                                              >  1:1962560/1‑100 (MQ=255)

                                                       gTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACAt                                              >  1:1328791/1‑100 (MQ=255)

                                                       gTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACAt                                              <  1:508657/100‑1 (MQ=255)

                                                         gCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATtg                                            <  1:2145442/100‑1 (MQ=255)

                                                         gCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATtg                                            <  2:250464/100‑1 (MQ=255)

                                                         gCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATtg                                            >  2:3164284/1‑100 (MQ=255)

                                                         gCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATtg                                            >  2:3118241/1‑100 (MQ=255)

                                                         gCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATtg                                            >  1:1209102/1‑100 (MQ=255)

                                                          cACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATtgt                                           >  1:2364828/1‑100 (MQ=255)

                                                           aCTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATtgtg                                          <  1:2520227/100‑1 (MQ=255)

                                                               gTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATc                                      <  1:3349407/100‑1 (MQ=255)

                                                               gTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATc                                      >  1:2636617/1‑100 (MQ=255)

                                                                tttATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCa                                     <  2:1865843/100‑1 (MQ=255)

                                                                 ttATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAg                                    <  2:1052507/100‑1 (MQ=255)

                                                                 gttaGCCGGATAACGCGTTCACGCCGTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAg                                    <  1:1603014‑M1/96‑1 (MQ=255)

                                                                  tATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAgg                                   <  1:1645038/100‑1 (MQ=255)

                                                                  tATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAgg                                   <  1:769352/100‑1 (MQ=255)

                                                                   aTGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGc                                  <  2:937519/100‑1 (MQ=255)

                                                                   aTGCCGGATACGGCATGAACGCGTTATCCGGCTAACAAAATCGTGAAAAATCAATAAATTGCAGAAACCCCATAAGCCGGATAAACATTGTGCATCAGGc                                  <  1:1161/100‑1 (MQ=255)

                                                                    tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                 <  2:1852164/100‑1 (MQ=255)

                                                                    tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                 >  1:2651066/1‑100 (MQ=255)

                                                                     gccggataacgcgttcacgccgtatccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCaa                                >  1:1847636‑M2/31‑100 (MQ=255)

                                                                      ccggataacgcgttcacgccgtatccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCaa                                >  1:788483‑M2/30‑99 (MQ=255)

                                                                       CGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAAc                              >  1:649523‑M1/1‑100 (MQ=255)

                                                                           TACGGCGTGAACGCGTTATTCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTAATAAACATTGTGCATCAGGCAAACTTCa                          <  1:3375958‑M1/100‑1 (MQ=255)

                                                                           TACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCa                          >  1:2868916‑M1/1‑100 (MQ=255)

                                                                            ACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCAc                         >  1:1840998‑M1/1‑100 (MQ=255)

                                                                             cGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACg                        <  1:2734763/100‑1 (MQ=255)

                                                                             cGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACg                        >  2:339685/1‑100 (MQ=255)

                                                                             cGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACg                        >  1:801063/1‑100 (MQ=255)

                                                                             acgcgttcacgccgtatccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACg                        >  2:662672‑M2/23‑100 (MQ=255)

                                                                              ggCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGc                       <  1:946370/100‑1 (MQ=255)

                                                                                  tGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCAttt                   <  2:847671/100‑1 (MQ=255)

                                                                                   gAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTa                  >  2:2032443/1‑100 (MQ=255)

                                                                                    aaCGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTac                 <  2:2014874/100‑1 (MQ=255)

                                                                                        cgTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTc             <  1:3017523/100‑1 (MQ=255)

                                                                                         gTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGGAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCg            <  2:1416817/100‑1 (MQ=255)

                                                                                            atccggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGccc         <  1:397138‑M2/93‑1 (MQ=255)

                                                                                             tccggcTAACAAAATCGTGAAAACTCAATATATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcccc        <  1:3402660‑M2/94‑1 (MQ=255)

                                                                                               cggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACCTTGTGCATCAGGCAAACTTCACGCATTTACACTCGccc         >  1:2883831‑M2/5‑97 (MQ=255)

                                                                                               cggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTcacgcatttacacagatcggaa      >  2:3385886‑M2/5‑91 (MQ=255)

                                                                                               cggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTg      >  2:2543286‑M2/5‑100 (MQ=255)

                                                                                               cggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTg      >  1:2222146‑M2/5‑100 (MQ=255)

                                                                                               cggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTg      <  1:692397‑M2/96‑1 (MQ=255)

                                                                                               cggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTg      >  1:1006468‑M2/5‑100 (MQ=255)

                                                                                                ggcTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGc     >  2:1456277‑M2/4‑100 (MQ=255)

                                                                                                  cTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGccc   <  1:2759245‑M2/99‑1 (MQ=255)

CAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCT  >  NC_000913/3525409‑3525607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.