| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2282818 = | 129 (0.920) | 8 (0.060) | 7/174 | 18.3 | 6.6% | intergenic (+17/+122) | rplY/yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| ? | NC_000913 | 2282846 = | NA (NA) | intergenic (+45/+94) | rplY/yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
TCTGAATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2282927‑2282818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggggttttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAT > NC_000913/2282846‑2282944 TCTGAATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGC > 2:947450/1‑100TCTGAATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGC > 2:1658046/1‑100TCTGAATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGC > 2:1107628/1‑100 TGAATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGG > 1:169298/1‑100 TGAATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGG < 1:3200053/100‑1 GAATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGG < 2:1554496/100‑1 GAATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGG < 2:1089994/100‑1 AATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGG > 2:2674310/1‑100 AATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGG < 2:2097160/100‑1 AATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGG > 2:3005709/1‑100 AATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGG < 2:3389614/100‑1 ATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGG > 1:3009594/1‑99 TGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGTAAAAAATAGCAATACCGTAATCAGTCATAATCTGCAGATACAAAAAACCCCGCTGGAGCGGGG > 1:2014751/1‑98 GCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTT < 2:827076/100‑1 GCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTT > 2:1207959/1‑100 GCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTT < 1:1107624/100‑1 CCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAGTCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTT > 1:1641306/1‑100 CCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTT > 1:1463590/1‑100 CCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTT > 2:1757677/1‑100 CCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTT < 1:409038/100‑1 CCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTT > 2:3136691/1‑100 CAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTTT < 2:3001832/100‑1 CAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTTT < 1:2443304/100‑1 AAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTG < 2:1474710/100‑1 ATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAT > 2:742628/1‑100 CCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAG > 1:2274760/1‑100 CAAAAAACCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATC > 2:2027768/1‑100 AAAAACCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTG > 2:81765/1‑100 AAAAACCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTG > 2:2360018/1‑100 AACCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCA > 2:3287644/1‑100 CCCCGCCGGAGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAT < 1:2360001/99‑1 GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAA < 2:272767/100‑1 GCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAA < 2:272623/100‑1 GGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAC > 2:1953189/1‑100 GGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACC < 2:931455/100‑1 GTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCG < 1:214529/100‑1 TTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGA < 1:3461837/100‑1 TTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAT < 2:773849/100‑1 TTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAT > 1:3130563/1‑100 TTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAT > 1:2976127/1‑100 TTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATT < 2:1084478/100‑1 TTTTGTATCTGCAGACTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATT < 2:3482179/100‑1 TTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTA > 2:1329190/1‑100 TGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAT > 1:1471268/1‑100 TCTGAATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCATAATCTGCAGATACAAAAAACCCCGCCGGAGCGGGGTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2282927‑2282818‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggggttttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAT > NC_000913/2282846‑2282944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |