New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2282818 =129 (0.920)8 (0.060) 7/174 18.3 6.6% intergenic (+17/+122) rplY/yejK 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein
?NC_000913 2282846 = NA (NA)intergenic (+45/+94) rplY/yejK 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 140 total aligned reads displayed.

CGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATT  >  NC_000913/2282751‑2282945
                                                                                               |                                                                                                   
cGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATc                                                                                                 <  1:1294590/100‑1 (MQ=255)
 gTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAGCCCCGCTCCGGCGGGGTTTTTTGTATc                                                                                                 <  2:1619858/99‑1 (MQ=255)
  tCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTg                                                                                               <  2:388904/100‑1 (MQ=255)
   cACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGc                                                                                              >  2:3009614/1‑100 (MQ=255)
    aCCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCa                                                                                             >  1:856461/1‑100 (MQ=255)
     cccGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAg                                                                                            >  2:1689267/1‑100 (MQ=255)
     cccGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAg                                                                                            >  1:3470904/1‑100 (MQ=255)
     cccGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAg                                                                                            >  2:729661/1‑100 (MQ=255)
      ccGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGa                                                                                           <  1:1243951/100‑1 (MQ=255)
      ccGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGa                                                                                           <  2:3149548/100‑1 (MQ=255)
         tACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCGGATTa                                                                                        <  2:269828/100‑1 (MQ=255)
          aCAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTAt                                                                                       >  2:1251284/1‑100 (MQ=255)
             aaCCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGcc                                                                                    >  2:840384/1‑100 (MQ=255)
             aaCCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGcc                                                                                    <  1:2553304/100‑1 (MQ=255)
                cGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGa                                                                                 >  2:2416308/1‑100 (MQ=255)
                cGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGa                                                                                 >  2:1709877/1‑100 (MQ=255)
                cGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGa                                                                                 >  1:2537566/1‑100 (MQ=255)
                      tGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACgg                                                                           >  2:1151461/1‑100 (MQ=255)
                      tGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACgg                                                                           <  1:747390/100‑1 (MQ=255)
                        cagcaCATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTa                                                                         <  2:3444215/100‑1 (MQ=255)
                         agcaCATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTAt                                                                        >  1:978962/1‑100 (MQ=255)
                         agcaCATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTAt                                                                        >  1:1054423/1‑100 (MQ=255)
                         agcaCATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTAt                                                                        <  2:717500/100‑1 (MQ=255)
                          gcaCATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTCTTTTGTATCTGCAGATTATGCCTGATTACGGTAtt                                                                       >  2:214530/1‑100 (MQ=255)
                           cacaTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTg                                                                      <  1:2360848/100‑1 (MQ=255)
                            acaTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGc                                                                     <  2:3232029/100‑1 (MQ=255)
                            acaTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGc                                                                     <  1:140231/100‑1 (MQ=255)
                            acaTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGCATCTGCAGTTTATGCCTGATTACGGTATTg                                                                      <  1:1461812/99‑1 (MQ=255)
                             caTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCt                                                                    >  1:681671/1‑100 (MQ=255)
                             caTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCt                                                                    >  2:2617713/1‑100 (MQ=255)
                             caTCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCt                                                                    >  1:1630421/1‑100 (MQ=255)
                                cGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAtt                                                                 >  1:963782/1‑100 (MQ=255)
                                cGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAtt                                                                 >  1:931451/1‑100 (MQ=255)
                                 gACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAttt                                                                >  1:773845/1‑100 (MQ=255)
                                 gACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTAttt                                                                <  2:65735/100‑1 (MQ=255)
                                       gttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCa                                                          <  1:588589/100‑1 (MQ=255)
                                        ttcgCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAg                                                         <  2:856465/100‑1 (MQ=255)
                                          cgcgCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAgg                                                        >  1:3072904/1‑99 (MQ=255)
                                          cgcgCTGAATTGCTGAATAAGTTGTAAAAAGCCCCGCTCCGTCGGGGTTTTTTGTATCTCCACATTATGACTGATTACCGTATTGCTATTTTTTGCa                                                          <  1:2730176/97‑1 (MQ=255)
                                            cgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCa                                                     <  1:2416290/100‑1 (MQ=255)
                                            cgcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCa                                                     >  2:295862/1‑100 (MQ=255)
                                             gcTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAg                                                    >  1:1041966/1‑100 (MQ=255)
                                             gcTTAATTGCTGAACAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAg                                                    <  1:2411376/100‑1 (MQ=255)
                                              cTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGa                                                   >  2:2543621/1‑100 (MQ=255)
                                                tAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGAGGGGTTTTTTGTATATGCAGATAATGCCTGATTACGGTATTGCTATTTTTTGCAGTCTAGATa                                                 >  1:1707587/1‑100 (MQ=255)
                                                  aTTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAg                                               >  1:1089649/1‑100 (MQ=255)
                                                   ttGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAgg                                              <  1:1168450/100‑1 (MQ=255)
                                                   ttGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAgg                                              <  2:2214915/100‑1 (MQ=255)
                                                    tGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGc                                             >  1:1940022/1‑100 (MQ=255)
                                                      cTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGt                                           >  2:1942152/1‑100 (MQ=255)
                                                      cTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGCTTTTTGTATCTGCAGATTATGCCTGATGACGGTATTGCTATTTTTTTCATTCCAGCTAAGGCg                                            >  1:599480/1‑99 (MQ=255)
                                                       tGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGtt                                          >  2:1359637/1‑100 (MQ=255)
                                                        gAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTc                                         <  1:3430250/100‑1 (MQ=255)
                                                        gAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCATGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTc                                         >  1:2269622/1‑100 (MQ=255)
                                                            aaGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgc                                     <  1:524598/100‑1 (MQ=255)
                                                            aaGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgc                                     >  2:2744794/1‑100 (MQ=255)
                                                             aGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgcc                                    <  2:554843/100‑1 (MQ=255)
                                                             aGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgcc                                    <  2:2787958/100‑1 (MQ=255)
                                                             aGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgcc                                    <  2:291819/100‑1 (MQ=255)
                                                              gTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccg                                   >  2:2857203/1‑100 (MQ=255)
                                                              gTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccg                                   <  2:191262/100‑1 (MQ=255)
                                                              gTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCAcgccg                                   <  1:2205297/100‑1 (MQ=255)
                                                                tGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCa                                 >  1:947446/1‑100 (MQ=255)
                                                                 gTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCAt                                >  1:1823716/1‑100 (MQ=255)
                                                                 gTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCAt                                >  1:2473192/1‑100 (MQ=255)
                                                                 gTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCAt                                >  2:24972/1‑100 (MQ=255)
                                                                  tAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTGTTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATc                               >  1:2480753/1‑100 (MQ=255)
                                                                  tAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATc                               >  1:272622/1‑100 (MQ=255)
                                                                  tAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATc                               >  1:272766/1‑100 (MQ=255)
                                                                    aaaaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTg                             >  1:2443304/1‑100 (MQ=255)
                                                                     aaaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTgg                            <  2:1757677/100‑1 (MQ=255)
                                                                     aaaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTgg                            <  2:3136691/100‑1 (MQ=255)
                                                                     aaaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTgg                            >  1:409038/1‑100 (MQ=255)
                                                                     aaaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGACTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTgg                            <  1:1641306/100‑1 (MQ=255)
                                                                      aaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGc                           >  1:1107624/1‑100 (MQ=255)
                                                                      aaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGc                           >  2:827076/1‑100 (MQ=255)
                                                                      aaaCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGc                           <  2:1207959/100‑1 (MQ=255)
                                                                         ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                        >  2:2097160/1‑100 (MQ=255)
                                                                         ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                        <  2:3005709/100‑1 (MQ=255)
                                                                         ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                         <  1:3009594/99‑1 (MQ=255)
                                                                         ccccGCTCCAGCGGGGTTTTTTGTATCTGCAGATTATGACTGATTACGGTATTGCTATTTTTTACAGGCCAGATAAGGCGTTCACGCCGCATCTGGCa                          <  1:2014751/98‑1 (MQ=255)
                                                                         ccacGCTCAGGCGGGGTCCTTTGTATCTGCAGATTATGCCTGAGTGCGGTAGGGCGAGTGTTGGCAGGCGAGAGAGGGCGTTCGCGCCTCATTTGGGAt                         >  1:2950793/4‑99 (MQ=255)
                                                                          cccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTc                       >  2:1089994/1‑100 (MQ=255)
                                                                          cccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTc                       >  2:1554496/1‑100 (MQ=255)
                                                                           ccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa                      >  1:3200053/1‑100 (MQ=255)
                                                                           ccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa                      <  1:169298/100‑1 (MQ=255)
                                                                             gCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGa                    <  2:1658046/100‑1 (MQ=255)
                                                                               tCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac                  <  2:2704136/100‑1 (MQ=255)
                                                                                ccGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAaca                 <  2:932231/100‑1 (MQ=255)
                                                                                  ggcggGGTTTTTTGTATCTGGAGATTATGCCTGATTACGGTATCGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAactc                <  1:1279406/99‑3 (MQ=255)
                                                                                  ggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTCTTGCTATTTTTTGCATGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac                  <  1:1885014/97‑1 (MQ=255)
                                                                                   gcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaa              <  2:272623/100‑1 (MQ=255)
                                                                                      gggTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAc           >  2:1953189/1‑100 (MQ=255)
                                                                                       ggTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAcc          <  2:931455/100‑1 (MQ=255)
                                                                                        gTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCg         <  1:214529/100‑1 (MQ=255)
                                                                                           ttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAtt      <  2:1084478/100‑1 (MQ=255)
                                                                                           ttttGTATCTGCAGACTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAtt      <  2:3482179/100‑1 (MQ=255)
                                                                                              tGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAt   >  1:1471268/1‑100 (MQ=255)
                                                                                               gTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAtt  <  1:2924373/100‑1 (MQ=255)
                                                                                               gTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAtt  <  1:3001812/100‑1 (MQ=255)
                                                                                               |                                                                                                   
CGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAATTGCTGAATAAGTTGTAAAAAACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATT  >  NC_000913/2282751‑2282945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.