New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 416834119 (0.140)20 (0.160) 14/158 NT 54.3% intergenic (+141/‑31) rrsB/gltT 16S ribosomal RNA of rrnB operon/tRNA‑Glu
?NC_000913 = 4168363 NA (NA)intergenic (+163/‑9) rrsB/gltT 16S ribosomal RNA of rrnB operon/tRNA‑Glu

Only 100 of 101 total aligned reads displayed.

GATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAG  >  NC_000913/4168242‑4168438
                                                                                                   |                                                                                                 
gATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT                                                                                                   <  1:3439368‑M1/100‑1 (MQ=255)
gATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT                                                                                                   >  1:163599‑M1/1‑100 (MQ=255)
gATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT                                                                                                   >  2:2518341‑M1/1‑100 (MQ=255)
gATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT                                                                                                   >  2:592015‑M1/1‑100 (MQ=255)
 aTAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAata                                                                                                  >  1:825623/1‑100 (MQ=38)
  tAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTCAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAatat                                                                                                 >  1:2053820/1‑100 (MQ=38)
   aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATc                                                                                                <  2:3652608/100‑1 (MQ=35)
   aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATc                                                                                                <  1:2754266/100‑1 (MQ=35)
   aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATc                                                                                                >  1:1501485/1‑100 (MQ=35)
   aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATc                                                                                                >  1:2021364/1‑100 (MQ=35)
   aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATc                                                                                                <  1:225762/100‑1 (MQ=35)
    gAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCa                                                                                               <  1:1777016/100‑1 (MQ=35)
     aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCAc                                                                                              <  2:1998434/100‑1 (MQ=33)
     aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCAc                                                                                              <  2:346333/100‑1 (MQ=33)
     aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCAc                                                                                              <  2:3108691/100‑1 (MQ=33)
     aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCAc                                                                                              <  1:3759586/100‑1 (MQ=33)
     aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCAc                                                                                              <  1:2153490/100‑1 (MQ=33)
     aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCAc                                                                                              >  2:2153506/1‑100 (MQ=33)
      aaGTGAAAAGCAAGGCGTTTACGCGTTGGGTGTGAGTCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAACGCTCACCCTACACGAAAATATCa                                                                                               <  1:2981244/98‑1 (MQ=255)
       aGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGATGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAACGCTCACCCTACACGAAAATATCACGc                                                                                            <  1:767315/100‑1 (MQ=12)
       aGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttat                                                                                            >  2:530232‑M1/1‑93 (MQ=255)
       aGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGc                                                                                            <  2:2195837/100‑1 (MQ=33)
        gTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCa                                                                                           <  2:3278241/100‑1 (MQ=33)
        gTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCa                                                                                           >  1:952737/1‑100 (MQ=33)
        gTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCa                                                                                           >  2:1410795/1‑100 (MQ=33)
        gTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCa                                                                                           >  1:3107717/1‑100 (MQ=33)
        atGAAAAGCAAGGCGTTTACGAATTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTAAATTAATGAAAGCAAACCCTACACGAAAATATCACGCa                                                                                           >  1:2909592/2‑100 (MQ=11)
         tGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCaa                                                                                          >  2:3390736/1‑100 (MQ=32)
           aaaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAcg                                                                                        >  2:252544/1‑100 (MQ=32)
           aaaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAcg                                                                                        >  2:902008/1‑100 (MQ=32)
            aaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAcgc                                                                                       >  2:2575949/1‑100 (MQ=31)
             aaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAcgcg                                                                                      <  2:1773678/100‑1 (MQ=11)
             aaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAcg                                                                                        >  1:1781767/1‑98 (MQ=11)
             aaGCAAGGCGGGTACGCGTTGGGAGTGGGTCTGAAGAAACCAAGGCCGTTCGCTTTCTATTAATGAATTCTAAACCAACAAAAAAATATCACGCAAcgcg                                                                                      <  1:271205/100‑1 (MQ=2)
                   ggtgTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGTCCGTTCGCTTTCTATTAATGAAAGCTCTCCCTACACGAAAATATCACGCGTTGCGTGATat                                                                                <  1:3046396/97‑2 (MQ=1)
                   ggCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAatcacgcgttgcgtgatat                                                                                 <  2:592674‑M1/100‑20 (MQ=255)
                     cGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAatcacgcgttgcgtgatattt                                                                               <  2:3165696‑M1/100‑22 (MQ=255)
                        ttACGCGTTGGGAGTGAGGCTGAAGATAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAatcacgcgttgcgtgatattttcg                                                                            <  1:1289523‑M1/100‑25 (MQ=255)
                        ttACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAatcacgcgttgcgtgatattttcg                                                                            <  2:2219273‑M1/100‑25 (MQ=255)
                              gTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgt                                                                     <  1:1310509‑M1/100‑31 (MQ=255)
                               ttGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtg                                                                    <  2:883713‑M1/100‑32 (MQ=255)
                                tgtgagtGAGGCTGAAGAGAATAAGGACGTTGGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtg                                                                    <  1:3108164‑M1/96‑32 (MQ=255)
                                 gggAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgta                                                                  <  1:2961525‑M1/100‑34 (MQ=255)
                                  ggAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtag                                                                 <  2:2669029‑M1/100‑35 (MQ=255)
                                  ggAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtag                                                                 <  1:231090‑M1/100‑35 (MQ=255)
                                  ggAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtag                                                                 <  2:3808122‑M1/100‑35 (MQ=255)
                                  ggAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtag                                                                 <  2:3807912‑M1/100‑35 (MQ=255)
                                   gAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagg                                                                <  2:1217324‑M1/100‑36 (MQ=255)
                                    aGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtaggg                                                               <  1:2991371‑M1/100‑37 (MQ=255)
                                               agagAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcat                                                    <  2:3570873‑M1/100‑48 (MQ=255)
                                                gagaATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcatn                                                   <  1:530225‑M1/100‑49 (MQ=255)
                                                    atacgcccGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGccc                                                <  1:674351/93‑1 (MQ=0)
                                                    aTAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcactcgttgcgtgatattttcgtgtagggtgagctttcattaata                                               <  2:3823477‑M1/100‑53 (MQ=255)
                                                       agtccGTTCGCTTTCTATTAATGAAAGCTCACTCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCa                                               <  1:1788722/94‑1 (MQ=0)
                                                          ccGTTCGCTTTCTATTAATGAAAGCTCACCCGACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagc                                         <  2:2415336‑M1/100‑59 (MQ=255)
                                                                gCTTTCTAGTAATGAAAGCTCACCCTACACGAAAAatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggcc                                       <  1:3790890‑M1/97‑62 (MQ=255)
                                                                            tgataactgaCCCTACGCGCAACTAGCTCTCCACGCGTAATAACCCATTCCCTTCTCCCCGTCGTCTCGATCCTGAGCACACCGCCCTTTCAcggcgg                         <  1:663382/89‑1 (MQ=0)
                                                                                    ttccgatctcgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctca               <  2:1032176‑M1/91‑85 (MQ=255)
                                                                                         tatacGAAAATATCACGCAACGCGTGATAAGCAATTTTCGGCTCCCCTTCGGCTAGAGGCCCAGGTCACCGCGCTTTCACGGCGGTAACAGGGGTTCGaa          <  2:3567635/97‑1 (MQ=1)
                                                                                          acactagagtatCACGCAAGCCGTGATAAGAAATTTTCGTTGCCCCTTCGTCTAGGGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGaa          <  1:3686023/90‑1 (MQ=1)
                                                                                          acacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactccca         <  1:1120102‑M1/100‑91 (MQ=255)
                                                                                           cacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaa        >  1:1465169‑M1/1‑9 (MQ=255)
                                                                                           cacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaa        >  1:2128272‑M1/1‑9 (MQ=255)
                                                                                           cacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaa        >  1:731403‑M1/1‑9 (MQ=255)
                                                                                           cacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaa        >  1:802616‑M1/1‑9 (MQ=255)
                                                                                           cacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaa        >  1:991947‑M1/1‑9 (MQ=255)
                                                                                           cacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaa        >  2:3665392‑M1/1‑9 (MQ=255)
                                                                                            acGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaan       <  1:1385154‑M1/100‑93 (MQ=255)
                                                                                            acGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaac       >  2:2075837‑M1/1‑8 (MQ=255)
                                                                                            acGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaac       >  2:1144890‑M1/1‑8 (MQ=255)
                                                                                            acGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaac       >  1:893118‑M1/1‑8 (MQ=255)
                                                                                            acGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaac       <  1:3714924‑M1/100‑93 (MQ=255)
                                                                                            acGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaac       >  2:3143421‑M1/1‑8 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtatgttgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcc           <  1:3673149‑M1/95‑89 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgcacggccttattctcttcagcctcactcccaacg      >  1:673758‑M1/1‑7 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttcttctcttcagcctcactcccaac       >  1:3526201‑M1/1‑7 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttcatctcttcagcctcactcccaac       >  1:3487141‑M1/1‑7 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      <  1:676942‑M1/100‑94 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      >  1:2712543‑M1/1‑7 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      >  2:3388027‑M1/1‑7 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      >  1:2518322‑M1/1‑7 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      >  1:1876399‑M1/1‑7 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      >  1:3716019‑M1/1‑7 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      <  2:2466711‑M1/100‑94 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      >  2:743069‑M1/1‑7 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      <  2:1365548‑M1/100‑94 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      <  2:1410914‑M1/100‑94 (MQ=255)
                                                                                             cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcaagatcggaa      >  1:1032168‑M1/1‑7 (MQ=255)
                                                                                             cGAAAATggcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg      >  2:3248562‑M1/1‑7 (MQ=255)
                                                                                               aaaaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcg    <  1:3349124‑M1/100‑96 (MQ=255)
                                                                                               aaaaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcg    <  2:3349389‑M1/100‑96 (MQ=255)
                                                                                               aaaaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcg    <  1:232810‑M1/100‑96 (MQ=255)
                                                                                               aaaaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcg    <  1:3568318‑M1/100‑96 (MQ=255)
                                                                                               aaaaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcg    <  2:647998‑M1/100‑96 (MQ=255)
                                                                                               aaaaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcg    <  2:2328186‑M1/100‑96 (MQ=255)
                                                                                               aaaaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcg    >  2:1243989‑M1/1‑5 (MQ=255)
                                                                                               aaaaTtgcttagcacgcgttgcgtgataatttcgtttagggtgagctttcattaatagaaatcgaacggccttattctcttcagcctcactcccaacgcg    <  1:3137303‑M1/100‑96 (MQ=255)
                                                                                                aaaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgt   <  1:3289387‑M1/100‑97 (MQ=255)
                                                                                                aaaTtgcttatcacgcgttgcgagatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgt   <  1:770771‑M1/100‑97 (MQ=255)
                                                                                                 aaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgta  <  2:1932327‑M1/100‑98 (MQ=255)
                                                                                                   |                                                                                                 
GATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAG  >  NC_000913/4168242‑4168438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.