New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 416834119 (0.140)20 (0.160) 14/158 NT 54.3% intergenic (+141/‑31) rrsB/gltT 16S ribosomal RNA of rrnB operon/tRNA‑Glu
?NC_000913 = 4168363 NA (NA)intergenic (+163/‑9) rrsB/gltT 16S ribosomal RNA of rrnB operon/tRNA‑Glu

ATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTT  >  NC_000913/4168294‑4168457
                                                                     |                                                                                              
atacgcccGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGccc                                                                   <  1:674351/93‑1 (MQ=0)
   agtccGTTCGCTTTCTATTAATGAAAGCTCACTCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCa                                                                  <  1:1788722/94‑1 (MQ=0)
                        tgataactgaCCCTACGCGCAACTAGCTCTCCACGCGTAATAACCCATTCCCTTCTCCCCGTCGTCTCGATCCTGAGCACACCGCCCTTTCAcggcgg                                            <  1:663382/89‑1 (MQ=0)
                                     tatacGAAAATATCACGCAACGCGTGATAAGCAATTTTCGGCTCCCCTTCGGCTAGAGGCCCAGGTCACCGCGCTTTCACGGCGGTAACAGGGGTTCGaa                             <  2:3567635/97‑1 (MQ=1)
                                      acactagagtatCACGCAAGCCGTGATAAGAAATTTTCGTTGCCCCTTCGTCTAGGGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGaa                             <  1:3686023/90‑1 (MQ=1)
                                                                tacgCAATTTTCGTATCCCCTTCGTCTAGAGGCCCTGGACACCACCCTCTCACGGCTGTAACAGGGGTTCGAATCCCCGAGGGGACGCCACTTGCTGGtg  >  1:3603482/4‑99 (MQ=1)
                                                                     |                                                                                              
ATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTT  >  NC_000913/4168294‑4168457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.