New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4359852 =152 (1.100)31 (0.220) 24/178 NT 17.4% coding (180/1335 nt) cadB putative lysine/cadaverine transporter
?NC_000913 = 4375338 143 (1.030)coding (320/1029 nt) epmB EF‑P‑Lys34 lysylation protein; weak lysine 2,3‑aminomutase

Only 100 of 198 total aligned reads displayed.

TTGCCCTGATTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAGGTAAGTACCTGAC  >  NC_000913/4375239‑4375437
                                                                                                   |                                                                                                   
ttgCCCTGATTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTAtt                                                                                                     <  2:3513422/100‑1 (MQ=255)
 tgCCCTGATTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAACCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTAttt                                                                                                    >  1:891639/1‑100 (MQ=255)
  gCCCTGATTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTca                                                                                                   <  2:3191970‑M2/100‑3 (MQ=255)
   cccTGATTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTca                                                                                                   <  1:80374‑M2/99‑3 (MQ=255)
    ccTGATTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagt                                                                                                 <  1:3196620‑M2/100‑5 (MQ=255)
    ccTGATTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATg                                                                                                 <  1:2408559/100‑1 (MQ=255)
    ccTGATTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATg                                                                                                 <  1:2353469/100‑1 (MQ=255)
     cTGATTTTCGGCATAGGGGCAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAACAAAAGCGCCCGGTTGTGGTATTTATGc                                                                                                <  1:3764068/100‑1 (MQ=255)
      tggttttCGGCATACGGGAAGTGACGACGGAATCATTGTCGGCAATGTTCCGCGGAGCTGCCTTTGACCAGCTATAGCACCCGGTTGTGGTATTTacg                                                                                                 <  1:401291/95‑3 (MQ=255)
      tGATTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGca                                                                                               >  2:977270/1‑100 (MQ=255)
        aTTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGcaa                                                                                              >  1:3135831/1‑99 (MQ=255)
         ttttCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGcaaca                                                                                            >  1:2138180/1‑100 (MQ=255)
         ttgtCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGcaac                                                                                             <  1:355038/96‑1 (MQ=255)
             cGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAAcc                                                                                        <  2:850803/100‑1 (MQ=255)
              ggCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatata                                                                                       >  1:2288017‑M2/1‑86 (MQ=255)
               gCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAg                                                                                      <  1:1119749/100‑1 (MQ=255)
               gCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAg                                                                                      >  2:2514506/1‑100 (MQ=255)
                cATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAgg                                                                                     >  1:2550644/1‑100 (MQ=255)
                cATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAgg                                                                                     >  1:1098733/1‑100 (MQ=255)
                cATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAgg                                                                                     >  2:3318859/1‑100 (MQ=255)
                  tAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCa                                                                                   >  2:1313137/1‑100 (MQ=255)
                   aGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCAc                                                                                  <  2:653958/100‑1 (MQ=255)
                    ggggAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACt                                                                                 >  2:3090157/1‑100 (MQ=255)
                    ggggAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACt                                                                                 >  2:3113124/1‑100 (MQ=255)
                    ggggAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACt                                                                                 <  1:2050571/100‑1 (MQ=255)
                       gAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacaga                                                                                   <  1:317571‑M2/95‑19 (MQ=255)
                       gAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACg                                                                              >  2:1957552/1‑100 (MQ=255)
                          gTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcg                                                                           <  1:771285‑M2/100‑27 (MQ=255)
                            gacgacGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcgac                                                                         <  1:2657328‑M2/100‑29 (MQ=255)
                            gacgacGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACgctgtg                                                                         <  2:1561418/100‑1 (MQ=255)
                            gacgacGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACgctgtg                                                                         >  1:1914111/1‑100 (MQ=255)
                            gacaacGGAAGCAATAGCGGCAATTTACCCCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACgctgtg                                                                         >  1:3161976/1‑100 (MQ=255)
                              cgacgGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACgctgtgct                                                                       >  2:2309484/1‑100 (MQ=255)
                              cgacgGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACgctgtgct                                                                       >  2:3718527/1‑100 (MQ=255)
                              cgacgGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACgctgtgct                                                                       >  1:1991155/1‑100 (MQ=255)
                              cgacgGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACgctgtgct                                                                       >  1:1692349/1‑100 (MQ=255)
                                acgGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACgctgtgctgt                                                                     <  1:1485497/100‑1 (MQ=255)
                                acgGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACgctgtgctgt                                                                     <  1:1788457/100‑1 (MQ=255)
                                   gAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcgacattgcac                                                                  <  2:2979985‑M2/100‑36 (MQ=255)
                                   gAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGttct                                                                  >  1:1055975/1‑100 (MQ=255)
                                      gCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTcc                                                               <  1:3041501/100‑1 (MQ=255)
                                      gCAATAGCGGCAATTTACCGCGCAACCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTcc                                                               >  2:2210541/1‑100 (MQ=255)
                                       cAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCa                                                              >  2:1403767/1‑100 (MQ=255)
                                       cAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCa                                                              >  1:999209/1‑100 (MQ=255)
                                        aaTAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAg                                                             <  2:489571/100‑1 (MQ=255)
                                          tAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTg                                                           <  1:1451137/100‑1 (MQ=255)
                                          tAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTg                                                           <  1:3090952/100‑1 (MQ=255)
                                          tAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTg                                                           <  1:3325594/100‑1 (MQ=255)
                                           aGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTgg                                                          <  1:2857826/100‑1 (MQ=255)
                                            gCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcgacattgcaccaataatag                                                         <  2:426110‑M2/100‑45 (MQ=255)
                                            gCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcgacattgcaccaataatag                                                         <  1:54685‑M2/100‑45 (MQ=255)
                                             cGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcgacattgcaccaataataga                                                        <  2:1117742‑M2/100‑46 (MQ=255)
                                             cGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTAGTGGTATTTCTGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGt                                                        >  1:1852784/1‑100 (MQ=255)
                                                      aCCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGgaga                                               >  1:436802/1‑100 (MQ=255)
                                                      aCCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGgaga                                               >  1:3636861/1‑100 (MQ=255)
                                                      aCCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGgag                                                <  1:1165089/99‑1 (MQ=255)
                                                      aCCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCAGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGgaga                                               <  1:1349105/100‑1 (MQ=255)
                                                       ncgcgcAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcgacattgcaccaataatagagataatcc                                                <  1:2968089‑M2/97‑54 (MQ=255)
                                                       ccGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGaa                                              <  1:3718501/100‑1 (MQ=255)
                                                        cgcgCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAAt                                             >  2:3776638/1‑100 (MQ=255)
                                                        cgcgCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAAt                                             >  2:781587/1‑100 (MQ=255)
                                                         gcgcAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcgacattgcaccaataatagagataatccaacc                                            >  2:2722535‑M2/1‑43 (MQ=255)
                                                            cAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCgg                                         >  1:117541/1‑100 (MQ=255)
                                                             aGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCggg                                        <  1:609857/100‑1 (MQ=255)
                                                              gccgccTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGgc                                       >  2:3206455/1‑100 (MQ=255)
                                                              gccgccTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGgc                                       <  2:585658/100‑1 (MQ=255)
                                                               ccgccTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGgcg                                      <  1:3050034/100‑1 (MQ=255)
                                                                  ncTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGa                                   >  1:1247736/2‑100 (MQ=255)
                                                                  ccTTTGACCAGCAAAAGCGCCCGGTTGTGGTTTTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGa                                   >  2:2594387/1‑100 (MQ=255)
                                                                  ccTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGa                                   >  2:36074/1‑100 (MQ=255)
                                                                   cTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGAt                                  >  2:1773420/1‑100 (MQ=255)
                                                                    tttGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATg                                 <  2:441578/100‑1 (MQ=255)
                                                                      tGACCAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcgacattgcaccaataatagagataatccaaccccagatagcaata                               <  1:2262094‑M2/100‑71 (MQ=255)
                                                                        aCCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACaa                             >  1:2823975/1‑100 (MQ=255)
                                                                         ccAGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcgacattgcaccaataatagagataatccaaccccagatagcaatacca                            <  2:123645‑M2/100‑74 (MQ=255)
                                                                         ccAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACaaa                            >  1:2717510/1‑100 (MQ=255)
                                                                           aGCAAAAGCGCCCGGTTGTGGTATTcagtcgggcatatacatacgccagcgacattgcaccaataatagagataatccaaccccagatagcaataccacc                          >  2:54686‑M2/1‑25 (MQ=255)
                                                                           aGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACt                          <  2:290378/100‑1 (MQ=255)
                                                                            gCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTc                         >  1:3794457/1‑100 (MQ=255)
                                                                                aaGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCt                     <  2:3149696/100‑1 (MQ=255)
                                                                                 aGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACACTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCtt                    >  1:2105619/1‑100 (MQ=255)
                                                                                    gcCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCg                 <  2:2860312/100‑1 (MQ=255)
                                                                                    gcCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCg                 >  2:3435059/1‑100 (MQ=255)
                                                                                    gcCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCg                 <  1:962509/100‑1 (MQ=255)
                                                                                     cccGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCgn                <  2:1747707/100‑2 (MQ=255)
                                                                                       cGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCTGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAgg              <  1:903959/100‑1 (MQ=255)
                                                                                        ggTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAGGt             <  2:1632023/100‑1 (MQ=255)
                                                                                        gcgtgtgGTATTTATGCAACAAACGAGGCACTACGCTGTGCTGTCATACCAGTGGGTCGGTGGAGAATCCGGGCGCGATGTCAACCTCATCTTGTGa                <  1:2216459/94‑1 (MQ=255)
                                                                                         gTTGTGGTATTcagtcgggcatatacatacgccagcgacattgcaccaataatagagataatccaaccccagatagcaataccaccgatacttgctaggt            <  2:1350008‑M2/100‑90 (MQ=255)
                                                                                         gTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAGGTa            <  2:2080260/100‑1 (MQ=255)
                                                                                           tgtgGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAGGTAAg          >  2:3298588/1‑100 (MQ=255)
                                                                                            gtgGTATTcagtcgggcatatacatacgccagcgacattgcaccaataatagagataatccaaccccagatagcaataccaccgatacttgctaggttcg         <  1:706138‑M2/100‑93 (MQ=255)
                                                                                            gtgGTATTcagtcgggcatatacatacgccagcgacattgcaccaataatagagataatccaaccccagatagcaataccaccgatacttgctaggttcg         >  1:3813359‑M2/1‑8 (MQ=255)
                                                                                            gtgGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAGGTAAGt         <  2:1846686/100‑1 (MQ=255)
                                                                                             tgGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAGGTAAGTa        <  2:891646/100‑1 (MQ=255)
                                                                                                tATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAGGTAAGTAcat     >  2:1995453/1‑98 (MQ=255)
                                                                                                tATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAGGTAAGTACCt     >  2:472450/1‑100 (MQ=255)
                                                                                                tATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAGGTAAGTACCt     >  2:1032490/1‑100 (MQ=255)
                                                                                                 aTTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTTCAGTGGGTCGGTGGAGAAGCCGGGCGCGATGACAATCTCATCTTGCGAGGTAAGTACCTg    <  1:2502671/100‑1 (MQ=255)
                                                                                                   tcagtcgggcatatacatacgccagcgacattgcaccaataatagagataatccaaccccagatagcaataccaccgatacttgctaggttcgcaggtaa  >  1:123642‑M2/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
TTGCCCTGATTTTCGGCATAGGGGAAGTGACGACGGAAGCAATAGCGGCAATTTACCGCGCAGCCGCCTTTGACCAGCAAAAGCGCCCGGTTGTGGTATTTATGCAACAAACCAGGCACTACGCTGTGCTGTTCTTCCAGTGGGTCGGTGGAGAATCCGGGCGCGATGACAAACTCATCTTGCGAGGTAAGTACCTGAC  >  NC_000913/4375239‑4375437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.