BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2560906 =	130 (1.070)	15 (0.170) +TTTCTTTGCCTTAATTCCATGAATTCA	11/144	11.2	13.6%	intergenic (+8/‑462)	yffL/yffM	CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein
*	?	NC_000913	2560978 =	133 (1.100)	15 (0.170) +TTTCTTTGCCTTAATTCCATGAATTCA	11/144	11.2	13.6%	intergenic (+80/‑390)	yffL/yffM	CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 131 total aligned reads displayed.

GTTGAGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGG  >  NC_000913/2560809‑2561005

   gAGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCgg                                                                                                >  1:217016/1‑100 (MQ=255)

    aGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCggg                                                                                               >  1:1568572/1‑100 (MQ=255)

     gCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGc                                                                                              >  1:1790347/1‑100 (MQ=255)

     gCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGc                                                                                              <  2:2124108/100‑1 (MQ=255)

      cGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCa                                                                                             <  2:2311130/100‑1 (MQ=255)

         aCTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATg                                                                                          <  2:1946951/100‑1 (MQ=255)

         aCTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATg                                                                                          <  2:383033/100‑1 (MQ=255)

            gAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTc                                                                                       >  1:172973/1‑100 (MQ=255)

              aGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTccc                                                                                     >  1:2862914/1‑100 (MQ=255)

              aGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTccc                                                                                     >  1:2408789/1‑100 (MQ=255)

               ggCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCg                                                                                    <  1:830987/100‑1 (MQ=255)

                  tatataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCt                                                                                 >  2:505655/1‑100 (MQ=255)

                  tatataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCt                                                                                 <  1:1560398/100‑1 (MQ=255)

                   atataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCt                                                                                 <  2:54558/99‑1 (MQ=255)

                    tataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCttt                                                                               <  1:1473006/100‑1 (MQ=255)

                    tataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCttt                                                                               <  1:1000661/100‑1 (MQ=255)

                     ataCCAGGATCGGCAGAAAGGGAGTGCAACAAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCtttt                                                                              >  2:1333968/1‑100 (MQ=255)

                      taCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTc                                                                             >  2:1388462/1‑100 (MQ=255)

                      taCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGC‑GGCAATGTTCCCGCCTTTTCt                                                                            >  2:1762877/1‑100 (MQ=255)

                        ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACGACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCtt                                                                           <  2:1733839/100‑1 (MQ=255)

                        ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCtt                                                                           >  2:794335/1‑100 (MQ=255)

                        ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCtt                                                                           >  2:1669447/1‑100 (MQ=255)

                        ccAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCtt                                                                           >  2:2794736/1‑100 (MQ=255)

                         cAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCttt                                                                          >  1:722912/1‑100 (MQ=255)

                         cAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCttt                                                                          <  1:562411/100‑1 (MQ=255)

                          aGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTg                                                                         <  2:719063/100‑1 (MQ=255)

                          aGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTg                                                                         <  2:868959/100‑1 (MQ=255)

                          aGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTg                                                                         <  1:526637/100‑1 (MQ=255)

                            gATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCTTTTTCTTTGcc                                                                       <  1:1372672/100‑1 (MQ=255)

                            gATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGcc                                                                       <  2:1790355/100‑1 (MQ=255)

                                ggCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTaa                                                                   >  1:401377/1‑100 (MQ=255)

                                 gCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAAt                                                                  <  1:2069327/100‑1 (MQ=255)

                                 gCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAAt                                                                  >  1:2907292/1‑100 (MQ=255)

                                   aGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTc                                                                <  1:222466/100‑1 (MQ=255)

                                    gAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTcc                                                               >  1:2398805/1‑100 (MQ=255)

                                      aaGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCAt                                                             <  2:2761813/100‑1 (MQ=255)

                                      aaGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCAt                                                             >  1:309561/1‑100 (MQ=255)

                                       aGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATg                                                            <  1:1073978/100‑1 (MQ=255)

                                       aGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATg                                                            <  2:2862931/100‑1 (MQ=255)

                                            gTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTc                                                       >  1:390086/1‑100 (MQ=255)

                                            gTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCCTAATTCCATGAATTc                                                       >  2:2955999/1‑100 (MQ=255)

                                              gCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAg                                                     >  2:1774983/1‑100 (MQ=255)

                                              gCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAg                                                     >  2:2970737/1‑100 (MQ=255)

                                               caacaaATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAgg                                                    <  2:841258/100‑1 (MQ=255)

                                               cAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAgg                                                    >  1:426282/1‑100 (MQ=255)

                                               cAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAgg                                                    >  1:1181570/1‑100 (MQ=255)

                                                aaCGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGt                                                   <  2:1217626/100‑1 (MQ=255)

                                                 aCGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTg                                                  >  1:1081616/1‑100 (MQ=255)

                                                 aCGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTg                                                  <  2:2816372/100‑1 (MQ=255)

                                                   gAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTggg                                                <  2:2327644/100‑1 (MQ=255)

                                                     aTACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTc                                              <  2:1549666/100‑1 (MQ=255)

                                                       aCCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCaa                                            >  2:1092119/1‑100 (MQ=255)

                                                       aCCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCaa                                            >  2:2156442/1‑100 (MQ=255)

                                                           gTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGt                                        <  1:1536539/100‑1 (MQ=255)

                                                              attattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTg                                      >  1:2358339/1‑99 (MQ=255)

                                                               ttattCAAGCCTTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTg                                      <  2:1301483/98‑1 (MQ=255)

                                                               ttattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGcc                                    <  2:172974/100‑1 (MQ=255)

                                                               ttattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGcc                                    <  2:935576/100‑1 (MQ=255)

                                                               ttattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGcc                                    >  2:2405273/1‑100 (MQ=255)

                                                                tattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                   >  2:1249004/1‑100 (MQ=255)

                                                                tattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                   <  2:2685096/100‑1 (MQ=255)

                                                                   tCAAGCCGTACAACCTGAAATAACGGAATCAGGCCGGCAACGTTCCCGCCTCTTCTTTCCCTTAATTCCAAGCATTCAGGTGGGTCCAAAGTTGCCGttc                                >  1:1225982/1‑99 (MQ=255)

                                                                   tCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTa                                <  1:1533530/100‑1 (MQ=255)

                                                                    cAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAg                               >  2:624896/1‑100 (MQ=255)

                                                                     aaGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgt                              >  2:753181/1‑100 (MQ=255)

                                                                     aaGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgt                              >  1:20093/1‑100 (MQ=255)

                                                                      aGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtg                             >  2:2868766/1‑100 (MQ=255)

                                                                       gCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtgg                            >  1:2633967/1‑100 (MQ=255)

                                                                       gCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtgg                            >  2:225995/1‑100 (MQ=255)

                                                                         cGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggtg                          >  2:1254279/1‑100 (MQ=255)

                                                                         cGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggtg                          <  2:1829568/100‑1 (MQ=255)

                                                                         cGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggtg                          <  2:1880277/100‑1 (MQ=255)

                                                                         cGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggtg                          <  1:137299/100‑1 (MQ=255)

                                                                         cGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggtg                          >  1:2444426/1‑100 (MQ=255)

                                                                         cGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtggtg                          <  2:2961493/100‑1 (MQ=255)

                                                                          gTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGtggtgg                         >  2:355589/1‑100 (MQ=255)

                                                                            acaacaTGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGt                       >  1:752255/1‑100 (MQ=255)

                                                                                  tGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAg                 >  1:1459016/1‑100 (MQ=255)

                                                                                  tGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAg                 <  2:1540682/100‑1 (MQ=255)

                                                                                  gatcttAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAg                 <  1:1061289/95‑1 (MQ=255)

                                                                                   gAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGt                <  1:2955982/100‑1 (MQ=255)

                                                                                   gAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTACTTTGCCTTAATTCCATGAATTCAGGTGAGTCAAAAGATGCCGTTAGTGGTGCGTCACAAGt                >  1:1785888/1‑100 (MQ=255)

                                                                                     aaTAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTg              >  1:2474554/1‑100 (MQ=255)

                                                                                      aTAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGc             >  2:2603394/1‑100 (MQ=255)

                                                                                       tAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAgagatc            >  2:1061294/1‑95 (MQ=255)

                                                                                       tAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGcc            <  2:2907309/100‑1 (MQ=255)

                                                                                       tAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGcc            <  1:1388456/100‑1 (MQ=255)

                                                                                       tAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGcc            >  1:311737/1‑100 (MQ=255)

                                                                                       tAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGcc            <  1:751560/100‑1 (MQ=255)

                                                                                        aaCGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCg           >  1:1137499/1‑100 (MQ=255)

                                                                                        aaCGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCg           <  1:643667/100‑1 (MQ=255)

                                                                                        aaCGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCg           >  2:2136116/1‑100 (MQ=255)

                                                                                         aCGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGt          <  2:1568581/100‑1 (MQ=255)

                                                                                         aCGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGt          >  1:1419742/1‑100 (MQ=255)

                                                                                         aCGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGt          >  2:34018/1‑100 (MQ=255)

                                                                                         aCGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGt          >  2:2548465/1‑100 (MQ=255)

                                                                                             aaTCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAg      <  2:20093/100‑1 (MQ=255)

                                                                                              aTCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAgg     <  2:309562/100‑1 (MQ=255)

                                                                                                cAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTg   >  2:1119929/1‑100 (MQ=255)

                                                                                                 aGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTgg  >  1:2750816/1‑100 (MQ=255)

GTTGAGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGG  >  NC_000913/2560809‑2561005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.