BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	501448 =	NA (NA)	6 (0.050)	5/164	NT	NA	noncoding (5/84 nt)	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	501478 =	NA (NA)	6 (0.050)	5/164	NT	NA	noncoding (35/84 nt)	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 171 total aligned reads displayed.

CTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAT  >  NC_000913/501349‑501547

gtggtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatg                                                                                                     >  2:2701316‑M1/100‑100 (MQ=255)

cTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAgg                                                                                                     <  2:1482803/100‑1 (MQ=255)

cTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAgg                                                                                                     <  2:2254859/100‑1 (MQ=255)

cTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAgg                                                                                                     <  1:3451500/100‑1 (MQ=255)

  ggtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGcc                                                                                                   <  2:3443445‑M1/3‑1 (MQ=255)

  ggtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGcc                                                                                                   <  1:1945240‑M1/3‑1 (MQ=255)

   gtgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCa                                                                                                  <  2:1986032‑M1/4‑1 (MQ=255)

   aaCCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGACGAGTCTTACTGTGATCGTTAAGTTATCGTCGGTTCGTATGc                                                                                                    >  1:1677621/1‑98 (MQ=255)

    tgacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAg                                                                                                 <  1:1759730‑M1/5‑1 (MQ=255)

    aCCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAg                                                                                                 >  2:1552228/1‑100 (MQ=255)

     gacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGa                                                                                                <  2:1060388‑M1/6‑1 (MQ=255)

     ccAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGa                                                                                                >  2:609712/1‑100 (MQ=255)

     ccAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGa                                                                                                >  2:2205555/1‑100 (MQ=255)

       cggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATa                                                                                              >  2:3424922‑M1/93‑100 (MQ=255)

       aGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATa                                                                                              >  2:1103798/1‑100 (MQ=255)

         cATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAg                                                                                            <  2:517692/100‑1 (MQ=255)

          aTTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAgg                                                                                           <  2:2994620/100‑1 (MQ=255)

           ttCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGACGAGCCTTACTGGGATCGTTAAGTTCTCGTCGGTTCGTAGGCCAGATCAgcc                                                                                          >  1:881939/1‑98 (MQ=255)

            tCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCg                                                                                         <  1:434054/100‑1 (MQ=255)

             cACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGt                                                                                        <  1:3270429/100‑1 (MQ=255)

               ccTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTc                                                                                      <  2:1134209/100‑1 (MQ=255)

               ccTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTc                                                                                      >  1:2466718/1‑100 (MQ=255)

               ccTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTc                                                                                      >  2:1337188/1‑100 (MQ=255)

                  cGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCAcg                                                                                   <  2:2784887/100‑1 (MQ=255)

                  cGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCAcg                                                                                   <  2:3294385/100‑1 (MQ=255)

                    tttAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCAcgcc                                                                                 <  1:3342799/100‑1 (MQ=255)

                    tttAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCAcgcc                                                                                 <  1:2844270/100‑1 (MQ=255)

                    tttAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCAcgcc                                                                                 <  1:1436636/100‑1 (MQ=255)

                          gcgcgGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCt                                                                           >  2:107624/1‑100 (MQ=255)

                          gcgcgGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCt                                                                           <  2:3131544/100‑1 (MQ=255)

                           cgcgGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTg                                                                          >  1:900884/1‑100 (MQ=255)

                           cgcgGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTg                                                                          <  2:2554309/100‑1 (MQ=255)

                           cgcgGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTGACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTg                                                                          <  2:1481232/100‑1 (MQ=255)

                            gcgGCTTGCCGGAGCGTGAAGACAGCCTGGAGGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTg                                                                          <  1:1708395/99‑1 (MQ=255)

                            gcgGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTgg                                                                         <  2:1928935/100‑1 (MQ=255)

                            gcgGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTgg                                                                         <  1:1242112/100‑1 (MQ=255)

                             cgGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGc                                                                        <  2:3409615/100‑1 (MQ=255)

                             cgGCTTGCCGGAGCGGGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGc                                                                        <  2:3492024/100‑1 (MQ=255)

                              ggCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCa                                                                       >  2:801458/1‑100 (MQ=255)

                               gtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                      >  2:1799307‑M1/69‑100 (MQ=255)

                                 aaaaaaagaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                     >  1:2870431‑M1/67‑99 (MQ=255)

                                   gCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTgg                                                                  >  2:2514948/1‑100 (MQ=255)

                                   gCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTg                                                                   >  1:1160276/1‑99 (MQ=255)

                                    ccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                 <  2:3123862/100‑1 (MQ=255)

                                    ccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                 <  1:299639/100‑1 (MQ=255)

                                    ccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCCTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                 >  1:364690/1‑100 (MQ=255)

                                      ggAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGctc                                                               <  2:1853892/100‑1 (MQ=255)

                                        aGCGTGAAGACAGCCTGGAAGAGTCTTACTAGGGTCGTTAAGTTATCGTCGGTTCGTAGGCCAGACAAGGCGTTCACGCCGCATCTGGCGTTTGGCcctc                                                             >  1:2335719/1‑100 (MQ=38)

                                         gCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTAGCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCg                                                            <  2:881944/100‑1 (MQ=255)

                                         gCGTGAAGACAGCCTGGAAGAGTCGTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGGTAAGGCGTTCACGCCGCATCTGGCATTTGGCtctc                                                             <  1:3001176/99‑1 (MQ=255)

                                          cGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGa                                                           >  2:235717/1‑100 (MQ=255)

                                          cGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGa                                                           >  1:1122532/1‑100 (MQ=255)

                                          cGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGa                                                           >  1:3511358/1‑100 (MQ=255)

                                            tGAAGACAGCCTGGAAGGTTTTTACTTGGTCCGTTAATTTATCGTCTGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCGTTTGGCTCTCGATg                                                         <  1:1543198/100‑1 (MQ=25)

                                             gAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGc                                                        >  2:1637756/1‑100 (MQ=255)

                                              aaGACAGCCTGGAAGAGTCTTACTGTGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGcc                                                       <  1:3255574/100‑1 (MQ=255)

                                              aaGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGcc                                                       >  2:2097757/1‑100 (MQ=255)

                                                gACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTg                                                     <  2:1120239/100‑1 (MQ=255)

                                                gACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGATATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTg                                                     <  1:1861320/100‑1 (MQ=255)

                                                     ccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCg                                                >  1:1986022/1‑100 (MQ=255)

                                                                cTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGcgcg                                     <  2:724680/100‑1 (MQ=255)

                                                                 ttACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGt                                    >  1:3103771/1‑100 (MQ=255)

                                                                  tACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTc                                   <  2:3536644/100‑1 (MQ=255)

                                                                   aCTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCt                                  >  1:2738376/1‑100 (MQ=255)

                                                                    cTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCtt                                 >  2:1992472/1‑100 (MQ=255)

                                                                    cTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCtt                                 <  1:88494/100‑1 (MQ=255)

                                                                    cTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCtt                                 >  2:456521/1‑100 (MQ=255)

                                                                     tGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTa                                <  2:1009271/100‑1 (MQ=255)

                                                                      gggATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTAt                               >  2:1383477/1‑100 (MQ=255)

                                                                       ggATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATc                              <  1:2543834/100‑1 (MQ=255)

                                                                       ggATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATc                              <  2:96633/100‑1 (MQ=255)

                                                                       ggATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATc                              <  2:25503/100‑1 (MQ=255)

                                                                        gATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCa                             <  2:2429472/100‑1 (MQ=255)

                                                                        gATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCa                             <  1:1615283/100‑1 (MQ=255)

                                                                           cGTTAAGGTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATg                           <  1:735847/99‑1 (MQ=255)

                                                                            gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGcc                         >  2:550821/1‑100 (MQ=255)

                                                                            gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGcc                         >  2:1783830/1‑100 (MQ=255)

                                                                              tAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTa                       <  2:952026/100‑1 (MQ=255)

                                                                                aGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACa                     >  1:2589766/1‑100 (MQ=255)

                                                                                aGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACa                     >  1:614363/1‑100 (MQ=255)

                                                                                  ttATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACata                   <  2:1959272/100‑1 (MQ=255)

                                                                                      cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAtttt               <  1:1103791/100‑1 (MQ=255)

                                                                                      cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAtttt               >  1:1808955/1‑100 (MQ=255)

                                                                                      cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAtttt               <  1:3151880/100‑1 (MQ=255)

                                                                                      cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttt                <  1:3374727/99‑1 (MQ=255)

                                                                                       gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGGCGCTGGCGCGTCTTATCATGCCTACATAttttt              >  1:1738319/1‑100 (MQ=255)

                                                                                       gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAttttt              >  2:1191094/1‑100 (MQ=255)

                                                                                       gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCACATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTCCATAttttt              >  1:2329979/1‑100 (MQ=255)

                                                                                          ggTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCat           >  2:2984456/1‑100 (MQ=255)

                                                                                          ggTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCat           >  2:60578/1‑100 (MQ=255)

                                                                                           gTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCata          <  1:108675/100‑1 (MQ=255)

                                                                                           gTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCata          <  2:3039106/100‑1 (MQ=255)

                                                                                           gTTCGTAGGCCAGATAAGGCGTTCACGCCGCAGCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCata          <  2:3038543/100‑1 (MQ=255)

                                                                                             tCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAtt        >  2:1898042/1‑100 (MQ=255)

                                                                                               gTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATCtttt      >  2:3322989/1‑100 (MQ=255)

                                                                                                tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCTCGTCTTATCATGCCTACATATTTTTCATATTTTa     <  1:2443780/100‑1 (MQ=255)

                                                                                                tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTa     >  1:2805893/1‑100 (MQ=255)

                                                                                                tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTa     <  2:1357400/100‑1 (MQ=255)

                                                                                                 aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTAc    <  1:2205541/100‑1 (MQ=255)

                                                                                                  ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACa   >  2:1427565/1‑100 (MQ=255)

CTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAT  >  NC_000913/501349‑501547

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.