New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 900753 =NA (NA)8 (0.070) 6/164 NT NA noncoding (5/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 900783 = NA (NA)noncoding (35/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 175 total aligned reads displayed.

ATATGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAAT  >  NC_000913/900654‑900852
                                                                                                   |                                                                                                   
cgaacggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtg                                                                                                     <  2:2797898‑M1/1‑1 (MQ=255)
 tatGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAgg                                                                                                     >  1:2747957/1‑99 (MQ=255)
  atGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGcc                                                                                                   >  2:2288012/1‑100 (MQ=255)
   tGCAATAAATATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTACGTCTTCATTATAACAATTTATGCACTATGTAGGCCg                                                                                                  <  1:1588062/100‑1 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCg                                                                                                  >  2:860406/1‑100 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCg                                                                                                  >  2:3527031/1‑100 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCg                                                                                                  >  2:2558667/1‑100 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGATTGTCCGTCTTCATTATAAGAATTCATGCACGATGTAGGcc                                                                                                   >  1:341622/1‑99 (MQ=255)
   acggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCg                                                                                                  <  2:3022191‑M1/4‑1 (MQ=255)
   acggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCg                                                                                                  >  2:2583011‑M1/97‑100 (MQ=255)
    gCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGATGACACTCAACAATATAAGAATTTATGCACTATGTAGGCCg                                                                                                  >  1:1205468/1‑99 (MQ=255)
    cggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCgg                                                                                                 >  1:2007482‑M1/96‑100 (MQ=255)
    cggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCgg                                                                                                 <  2:1836071‑M1/5‑1 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACAGACAACTTAGTGTGTTGTCCGTATACATTATAAGAATTTATGCACTATGTAGGcc                                                                                                   >  1:886081/1‑97 (MQ=255)
       aTAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATa                                                                                              <  2:329817/100‑1 (MQ=255)
         aaaCATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAg                                                                                            >  2:1667862/1‑100 (MQ=255)
          aaCATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAgg                                                                                           >  2:2901473/1‑100 (MQ=255)
          aaCATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAgg                                                                                           <  2:450236/100‑1 (MQ=255)
            cATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCg                                                                                         >  2:1516703/1‑100 (MQ=255)
            cATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTACGTCTTAATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCg                                                                                         >  1:1145846/1‑100 (MQ=255)
                aTTAAATTATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTccc                                                                                     >  2:1856620/1‑100 (MQ=255)
                   aaaTAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCAGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCccgc                                                                                  >  1:20536/1‑100 (MQ=255)
                     ataatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCccgccg                                                                                <  2:1411828/100‑1 (MQ=255)
                      taatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCcgccgc                                                                               <  2:2995388/100‑1 (MQ=255)
                       aatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCa                                                                              <  1:3475734/100‑1 (MQ=255)
                       aatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCa                                                                              <  1:851824/100‑1 (MQ=255)
                        atTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCAt                                                                             >  2:202383/1‑100 (MQ=255)
                            cattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCgg                                                                         >  2:2094616‑M1/72‑100 (MQ=255)
                              ttcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGca                                                                       >  1:1916102‑M1/70‑100 (MQ=255)
                              ttcgccggggggttttggaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGca                                                                       >  1:1916235‑M1/70‑100 (MQ=255)
                              aTGAAATAAAAATGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATATGGCGTCTCCGCCGCATCCgg                                                                         >  1:121587/1‑98 (MQ=255)
                              aTGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGca                                                                       >  2:3157315/1‑100 (MQ=255)
                                gAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcaca                                                                     >  1:610834/1‑100 (MQ=255)
                                gAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTACGCCGGATAAGGCGTCCCCGCCGCATCCGGcaca                                                                     >  1:3235374/1‑100 (MQ=255)
                                cgccggggggttttgtaggtctgataggacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGcac                                                                      >  1:137160‑M1/68‑99 (MQ=255)
                                  aaTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAgg                                                                   >  2:3061110/1‑100 (MQ=255)
                                   aTAAAAAAGACGGACAACTTAGTGGGTTGTCTGTCTTCATTATAAGAATTTATGTAATATGTAGGTCGGCTAAGGTGTCACCTACGCATCCGGca                                                                       >  1:2643544/1‑95 (MQ=255)
                                   aTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                  >  2:2885596/1‑100 (MQ=255)
                                   aTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                  >  1:421192/1‑100 (MQ=255)
                                      aaaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCAcc                                                               <  2:2620173/100‑1 (MQ=255)
                                      aaaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCAcc                                                               <  2:1636174/100‑1 (MQ=255)
                                      aaaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCATCCCTGCCGCATCCGGCACAGGCAc                                                                >  1:1485749/1‑99 (MQ=255)
                                         aaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTg                                                            <  2:1453011/100‑1 (MQ=255)
                                         aaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTg                                                            >  2:689235/1‑100 (MQ=255)
                                          aGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGc                                                           <  2:2364908/100‑1 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                        >  1:930517/1‑100 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                        >  1:1832647/1‑100 (MQ=255)
                                              ggACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGAt                                                       <  1:233938/100‑1 (MQ=255)
                                              ggACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGAt                                                       >  1:1717995/1‑100 (MQ=255)
                                                 cAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTc                                                    <  2:3422644/100‑1 (MQ=255)
                                                   aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTg                                                  >  1:2914379/1‑100 (MQ=255)
                                                   aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTg                                                  >  2:104648/1‑100 (MQ=255)
                                                   aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTg                                                  >  2:3521093/1‑100 (MQ=255)
                                                   aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTg                                                  <  1:131006/100‑1 (MQ=255)
                                                    cTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGa                                                 <  1:1003596/100‑1 (MQ=255)
                                                     ttAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGAt                                                >  2:1010137/1‑100 (MQ=255)
                                                     ttAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGAt                                                <  1:1792940/100‑1 (MQ=255)
                                                      tAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATg                                               <  1:2524047/100‑1 (MQ=255)
                                                        gTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCg                                             <  1:2538792/100‑1 (MQ=255)
                                                          gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGAc                                           >  2:1224831/1‑100 (MQ=255)
                                                           ggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACg                                          >  1:3319601/1‑100 (MQ=255)
                                                              tGTCCGTCTTCATGATAAGAATTTATGCACTATGTAGGACGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTg                                       >  1:2194554/1‑100 (MQ=255)
                                                               gTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTgg                                      >  2:3337223/1‑100 (MQ=255)
                                                                 ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                    >  2:97426/1‑100 (MQ=255)
                                                                 ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                    >  1:894086/1‑100 (MQ=255)
                                                                 ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                    <  1:2446278/100‑1 (MQ=255)
                                                                  cGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcgc                                   >  2:102081/1‑100 (MQ=255)
                                                                   gTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                  <  2:2184085/100‑1 (MQ=255)
                                                                     cTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTc                                <  2:3477302/100‑1 (MQ=255)
                                                                       tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                              >  1:2650903/1‑100 (MQ=255)
                                                                        cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTa                             <  1:2446474/100‑1 (MQ=255)
                                                                         aTTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTa                             <  1:2434346/99‑1 (MQ=255)
                                                                           tataAGATTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATc                           <  1:3075114/99‑1 (MQ=255)
                                                                           tataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCa                          >  2:1610304/1‑100 (MQ=255)
                                                                           tataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCa                          <  2:2516862/100‑1 (MQ=255)
                                                                            ataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAg                         >  1:730555/1‑100 (MQ=255)
                                                                             taAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGa                        >  1:2379007/1‑100 (MQ=255)
                                                                             taAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGa                        >  2:2913205/1‑100 (MQ=255)
                                                                               aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                      >  2:419727/1‑100 (MQ=255)
                                                                                gAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCt                     >  2:395464/1‑100 (MQ=255)
                                                                                 aaTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTa                    >  2:612599/1‑100 (MQ=255)
                                                                                 aaTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTa                    <  1:1008033/100‑1 (MQ=255)
                                                                                  aTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCATAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTAc                   <  1:1658596/100‑1 (MQ=255)
                                                                                  aTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTAc                   <  2:2948574/100‑1 (MQ=255)
                                                                                      aTGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaaaa               <  1:612901/100‑1 (MQ=255)
                                                                                      aTGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaaaa               <  2:571380/100‑1 (MQ=255)
                                                                                       tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc              <  2:1391304/100‑1 (MQ=255)
                                                                                       tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc              <  1:1516696/100‑1 (MQ=255)
                                                                                       tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCACATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc              <  2:1798794/100‑1 (MQ=255)
                                                                                        gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcc             >  2:2024963/1‑100 (MQ=255)
                                                                                         cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc            <  2:2194568/100‑1 (MQ=255)
                                                                                          aCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccc           >  2:2425696/1‑100 (MQ=255)
                                                                                          aCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccc           <  1:1132803/100‑1 (MQ=255)
                                                                                            tATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcccccc         <  1:3157293/100‑1 (MQ=255)
                                                                                             aTGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCg        >  1:335320/1‑100 (MQ=255)
                                                                                              tGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCgg       >  2:741462/1‑100 (MQ=255)
                                                                                               gTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGGCTTATCAGACCTACAAAACCCCCCGGc      >  1:1580644/1‑100 (MQ=255)
                                                                                                tAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCg     >  2:298655/1‑100 (MQ=255)
                                                                                                 aGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGa    >  2:2070233/1‑100 (MQ=255)
                                                                                                 aGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGa    >  2:1124312/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATATGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAAT  >  NC_000913/900654‑900852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.