New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2888334 =NA (NA)8 (0.070) 5/164 NT NA noncoding (1/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2888367 = NA (NA)noncoding (34/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 170 total aligned reads displayed.

GGCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGC  >  NC_000913/2888235‑2888433
                                                                                                   |                                                                                                   
tgaaggcttcggcggctttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagg                                                                                                     >  1:2975805‑M1/100‑100 (MQ=255)
ggCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttg                                                                                                     >  2:626900/1‑100 (MQ=255)
 gaaggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGc                                                                                                    <  1:3283660‑M1/2‑1 (MQ=255)
 gCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAATTCGTTCAGCGCGTTTAGATCGAGTTTGTACATAGATTCCTCACTGTttgccttgc                                                                                                    <  1:1050377/100‑1 (MQ=255)
  cGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgcc                                                                                                   <  1:1146084/100‑1 (MQ=255)
  cGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgcc                                                                                                   >  2:3031243/1‑100 (MQ=255)
  aaggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGcc                                                                                                   >  1:1656480‑M1/98‑100 (MQ=255)
   gTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTtgccttgcct                                                                                                  <  2:2613066/100‑1 (MQ=255)
    ttAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTg                                                                                                 >  1:2284128/1‑100 (MQ=255)
    ggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatgcggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTg                                                                                                 <  1:1265041‑M1/5‑1 (MQ=255)
    ggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTg                                                                                                 >  1:2549709‑M1/96‑100 (MQ=255)
     tAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGa                                                                                                <  1:783313/100‑1 (MQ=255)
      cttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGAt                                                                                               <  1:831836‑M1/7‑1 (MQ=255)
      cttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGAt                                                                                               <  1:2218922‑M1/7‑1 (MQ=255)
      aGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGAt                                                                                               <  2:772959/100‑1 (MQ=255)
       tgttCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATg                                                                                              >  2:3003159/3‑100 (MQ=255)
       gTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATg                                                                                              <  2:2667144/100‑1 (MQ=255)
       gTTTCCGCCAGCGCAAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATg                                                                                              >  2:3541449/1‑100 (MQ=255)
        tttCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGc                                                                                             <  1:1764466/100‑1 (MQ=255)
        tttCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGc                                                                                             <  1:1345612/100‑1 (MQ=255)
          tCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGa                                                                                           >  1:2691139/1‑100 (MQ=255)
           ccGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGAc                                                                                          <  2:3184188/100‑1 (MQ=255)
           ccGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGAc                                                                                          <  2:2711532/100‑1 (MQ=255)
             gccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGc                                                                                        <  2:466558/100‑1 (MQ=255)
                  cgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcg                                                                                   <  2:3445700/100‑1 (MQ=255)
                   gccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcgc                                                                                  >  1:3073742/1‑100 (MQ=255)
                        aaTGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCt                                                                             <  2:1480041/100‑1 (MQ=255)
                         aTGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCtt                                                                            >  1:145674/1‑100 (MQ=255)
                            cGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATc                                                                         <  1:1707891/100‑1 (MQ=255)
                            cGATCTACCTTCGGCAGTTCGTTCACGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATc                                                                         <  1:1482155/100‑1 (MQ=255)
                            cGAGCTACCTTCGGCAGTTCTGTCAGGGCGTTGAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCGTGCCTGATGCGACGCTCACGCGTTCTTAt                                                                          <  1:2486142/99‑1 (MQ=38)
                             gATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCa                                                                        <  2:2691156/100‑1 (MQ=255)
                               tCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAgg                                                                      <  1:569325/100‑1 (MQ=255)
                               ggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAgg                                                                      >  2:1391804‑M1/69‑100 (MQ=255)
                                gcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGc                                                                     >  2:3004115‑M1/68‑100 (MQ=255)
                                gcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGc                                                                     >  1:388007‑M1/68‑100 (MQ=255)
                                 tACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                    <  1:2585909/100‑1 (MQ=255)
                                 tACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                    <  1:3232523/100‑1 (MQ=255)
                                  atcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                   >  1:2181966‑M1/66‑100 (MQ=255)
                                  atcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                   >  2:127739‑M1/66‑100 (MQ=255)
                                  aCCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGccc                                                                   >  2:1992632/1‑99 (MQ=255)
                                   tcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTa                                                                  >  1:1624891‑M1/65‑100 (MQ=255)
                                   ccTTCGGCAGTTCGTTCAGGGCCTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTTTTGCGACGCTCGCGCGTTCTTATCAGGcc                                                                    <  1:1007967/98‑1 (MQ=255)
                                     ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                <  1:511419/100‑1 (MQ=255)
                                      tCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACaa                                                               >  1:985378/1‑100 (MQ=255)
                                      tCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACaa                                                               <  2:3286417/100‑1 (MQ=255)
                                        ggCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGa                                                             >  2:1246107/1‑100 (MQ=255)
                                        ggCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGa                                                             >  1:209500/1‑100 (MQ=255)
                                         gCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGAc                                                            >  1:2101849/1‑100 (MQ=255)
                                            gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                         <  1:2905470/100‑1 (MQ=255)
                                              tcgttcAGGGCGTTTAGATCGCGTTTGGACATAGATTCCACACTGTTTGCCGTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGc                                                       <  1:513790/100‑1 (MQ=255)
                                              tcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGc                                                       <  2:950081/100‑1 (MQ=255)
                                              tcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGc                                                       <  1:1085317/100‑1 (MQ=255)
                                              tcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGc                                                       <  2:369465/100‑1 (MQ=255)
                                              tcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGc                                                       <  1:471478/100‑1 (MQ=255)
                                              tcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGc                                                       <  1:3485808/100‑1 (MQ=255)
                                                gttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTg                                                     <  1:79981/100‑1 (MQ=255)
                                                 ttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGa                                                    <  1:2710976/100‑1 (MQ=255)
                                                 ttcAGGGCGTTTAGATCGAGTATGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGa                                                    <  2:3193695/100‑1 (MQ=255)
                                                   cAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATg                                                  <  2:1626599/100‑1 (MQ=255)
                                                     gggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                <  2:1690158/100‑1 (MQ=255)
                                                      ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                               <  1:3151115/100‑1 (MQ=255)
                                                      gccGTTTAGATCGAGTTTGGACATATATTCCTCACTGCTTGCCATGCCTGATGCGACGCTCACGCGTTCGTAACAGCCCTCCCAGACCGGGCTGATgg                                                 <  1:528970/96‑1 (MQ=255)
                                                        cGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTaa                                             >  2:2431402/1‑100 (MQ=255)
                                                         gTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATggagatc                                            >  2:811068/1‑95 (MQ=255)
                                                          tttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATc                                           >  2:3447101/1‑100 (MQ=255)
                                                           ttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATcc                                          >  1:1154095/1‑100 (MQ=255)
                                                            tAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATccc                                         <  2:156813/100‑1 (MQ=255)
                                                              gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                       >  1:386255/1‑100 (MQ=255)
                                                              gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                       <  2:2078255/100‑1 (MQ=255)
                                                               aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcaca                                      >  2:1534310/1‑100 (MQ=255)
                                                                  gAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAAt                                   <  2:934686/100‑1 (MQ=255)
                                                                   aGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATc                                  <  2:3249469/100‑1 (MQ=255)
                                                                    gTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCa                                 <  1:1849127/100‑1 (MQ=255)
                                                                         gACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACgcgc                            >  1:1502745/1‑100 (MQ=255)
                                                                          aCATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGcc                           <  1:2058072/100‑1 (MQ=255)
                                                                          aCATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGcc                           <  2:830328/100‑1 (MQ=255)
                                                                           cATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCg                          >  2:1822999/1‑100 (MQ=255)
                                                                             tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAcgcagatcg                        >  1:3546777/1‑94 (MQ=255)
                                                                             tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGa                        >  2:2010493/1‑100 (MQ=255)
                                                                               gATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATc                      <  2:1080590/100‑1 (MQ=255)
                                                                                aTTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTTATGGTTAATCCCACAAATCACGCGCCGGATCg                     <  2:3371142/100‑1 (MQ=255)
                                                                                aTTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCg                     <  2:695752/100‑1 (MQ=255)
                                                                                  tCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAg                   <  1:219654/100‑1 (MQ=255)
                                                                                   ccTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGc                  <  2:1720229/100‑1 (MQ=255)
                                                                                   ccTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGc                  <  1:1547360/100‑1 (MQ=255)
                                                                                    cTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACACATCACGCGCCGGATCGAGCa                 >  1:2943327/1‑100 (MQ=255)
                                                                                    cTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCa                 >  1:1928248/1‑100 (MQ=255)
                                                                                        cTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCgg             <  2:145675/100‑1 (MQ=255)
                                                                                          gTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGc           <  1:1187753/100‑1 (MQ=255)
                                                                                          gTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGc           >  2:3104221/1‑100 (MQ=255)
                                                                                          gTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGc           >  2:159280/1‑100 (MQ=255)
                                                                                              gccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAat       >  2:3472147/1‑100 (MQ=255)
                                                                                              gccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAat       >  2:599726/1‑100 (MQ=255)
                                                                                              gccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAat       <  1:2366002/100‑1 (MQ=255)
                                                                                              gccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAat       >  1:3452977/1‑100 (MQ=255)
                                                                                                  tgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatgatg   <  1:2958582/100‑1 (MQ=255)
                                                                                                  tgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatgatg   <  1:1568881/100‑1 (MQ=255)
                                                                                                   GCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCTCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc  <  2:1014417‑M1/100‑1 (MQ=255)
                                                                                                   GCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc  <  2:3381386‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGC  >  NC_000913/2888235‑2888433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.