New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4240157 =NA (NA)12 (0.100) 7/164 NT NA noncoding (1/37 nt) REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4240190 = NA (NA)noncoding (34/37 nt) REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 186 total aligned reads displayed.

TTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACA  >  NC_000913/4240059‑4240256
                                                                                                  |                                                                                                   
 tCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGcc                                                                                                   <  2:1432403/100‑1 (MQ=255)
 tCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGcc                                                                                                   <  2:2144945/100‑1 (MQ=255)
 cgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGcc                                                                                                   >  1:2235436‑M1/98‑100 (MQ=255)
 cgcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGc                                                                                                    >  1:3035843‑M1/98‑99 (MQ=255)
  gcaaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCg                                                                                                  >  2:3447845‑M1/97‑100 (MQ=255)
  cgagagGAACATGGTCGATTTTTCGCGCTTTGCTGGTGGCTGGGAATGACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGc                                                                                                    <  2:1919730/96‑1 (MQ=255)
  ccAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGcca                                                                                                  >  1:2144933/1‑99 (MQ=255)
  ccAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCg                                                                                                  >  1:1189763/1‑100 (MQ=255)
   caaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCgg                                                                                                 <  2:1374358‑M1/5‑1 (MQ=255)
   caaaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCgg                                                                                                 <  1:3426185‑M1/5‑1 (MQ=255)
    agagGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGCATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGa                                                                                                >  1:384150/1‑100 (MQ=255)
     aaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgccttcaccaaagccggatatacctacccgtagGCCGGAt                                                                                               <  1:3012175‑M1/7‑1 (MQ=255)
     aaaatgtgacggagatctatattttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGAt                                                                                               >  1:2002547‑M1/94‑100 (MQ=255)
       ngAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATgc                                                                                             >  2:1308156/2‑100 (MQ=255)
       ggAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTTTTTTTTTTGCTTTGGTGCGGTTTGTCTTGCCGGATgc                                                                                             >  1:2695618/1‑100 (MQ=255)
        gAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATgcg                                                                                            <  2:3311527/100‑1 (MQ=255)
           gatcttCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGcgccg                                                                                         <  2:987791/95‑1 (MQ=255)
            aTTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGcgccgc                                                                                        <  2:1904028/100‑1 (MQ=255)
              tGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCa                                                                                      <  2:1668485/100‑1 (MQ=255)
              tGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCa                                                                                      <  2:3144800/100‑1 (MQ=255)
                tCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGcgccgagatc                                                                                    >  1:987785/1‑95 (MQ=255)
                tCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAgg                                                                                    <  1:2860262/100‑1 (MQ=255)
                 cGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGgc                                                                                   <  2:417939/100‑1 (MQ=255)
                   aTTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTACCGGATGCGCCGCCAGgcgc                                                                                 <  2:3496091/100‑1 (MQ=255)
                      tttCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGc                                                                              <  1:2088878/100‑1 (MQ=255)
                         cgcgCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGTGGCTTa                                                                           <  2:1251758/100‑1 (MQ=255)
                           cgcATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTTTTTTTTCTTCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATc                                                                         >  1:3252147/1‑100 (MQ=255)
                            ttttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATcc                                                                        >  2:2019766‑M1/71‑100 (MQ=255)
                             tttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagtcggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCg                                                                       >  1:1242769‑M1/70‑100 (MQ=255)
                             tttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCg                                                                       >  2:1650609‑M1/70‑100 (MQ=255)
                             tttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCg                                                                       >  1:3031998‑M1/70‑100 (MQ=255)
                             cATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATccn                                                                       <  1:2235120/100‑2 (MQ=255)
                              ttgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCgg                                                                      >  1:12780‑M1/69‑100 (MQ=255)
                               tgtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGc                                                                     >  2:1344194‑M1/68‑100 (MQ=255)
                                tGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                    <  1:1011256/100‑1 (MQ=255)
                                gtgtatgttttgttcaacctggatttggagcgcgcctccaccaaagccggatatacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                    >  2:1984642‑M1/67‑100 (MQ=255)
                                 gCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCt                                                                   >  1:3506908/1‑100 (MQ=255)
                                    ggtggCTGGGAATCACCTGAATGGGTGATTTTTTATTTTTTTTCTTAGGTGCGGTTTGTCTTGCCGGATGCGCCGCTAGTCGCGGCTTATCCGGGCTACg                                                                >  1:3103281/1‑100 (MQ=255)
                                    ggtggCTGGGAATCACCTGAATGGGTGATTTTTTATTTATTTTCTTTGGTGCGGTTTGGCTTGCCGGATTCGCCGCCAGGCGCGGCTTATCCGGCCTAc                                                                 >  1:1962129/1‑99 (MQ=255)
                                    ggtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACg                                                                >  2:611817/1‑100 (MQ=255)
                                    ggtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACg                                                                >  1:105293/1‑100 (MQ=255)
                                     gtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACgg                                                               <  1:141536/100‑1 (MQ=255)
                                     gtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACgg                                                               <  2:1923270/100‑1 (MQ=255)
                                     gtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACgg                                                               >  1:2125753/1‑100 (MQ=255)
                                       ggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggt                                                             <  2:1819730/100‑1 (MQ=255)
                                        gCTGGGAATCACCTGAATGGGTGATTTTTGAATTACTGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggta                                                            >  1:3286952/1‑100 (MQ=255)
                                         cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                           >  2:1012079/1‑100 (MQ=255)
                                         cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                           >  2:1445217/1‑100 (MQ=255)
                                         cTGGGAATCACCTCAATGGGTGATTTTTTTTTTTTTTTATTTGGTACGGTGTGTCTTGCCGTATGCGCTGCCAGGCGCGGCTTATTCGGCCTACGgtta                                                            >  1:2196227/1‑99 (MQ=255)
                                          tGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTGTCCGGCCTACGggtagg                                                          <  1:2541015/100‑1 (MQ=255)
                                          tGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtagg                                                          <  2:522203/100‑1 (MQ=255)
                                           gggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTCCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                         <  1:2269351/100‑1 (MQ=255)
                                                tCACCTGAATGGGTGATTTTTTTTTTTTTTGCTTTAGTACGATTTGTCTTGCCGGATGCTCCGCCTGGCGCGGCTTATCCGGCCTACGGGTAGGTgtat                                                     >  1:720761/1‑99 (MQ=255)
                                                 cACCTGAATGGGTGATTTTTTTTTTTTTTTCTTTGGTGCGGTTTGTCTTGCCGGATGCGGCGGCGGGCGCGGCTTATCCGGGCTACTGGTAGGtcta                                                      >  1:2730574/1‑97 (MQ=255)
                                                   ccTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCgg                                                 >  1:2820025/1‑100 (MQ=255)
                                                    cTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGc                                                <  2:445706/100‑1 (MQ=255)
                                                    cTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGc                                                <  1:1141693/100‑1 (MQ=255)
                                                    cTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGc                                                >  1:1597136/1‑100 (MQ=255)
                                                    cTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGc                                                >  2:3118694/1‑100 (MQ=255)
                                                     tGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCt                                               >  2:106807/1‑100 (MQ=255)
                                                     tGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCt                                               <  2:3247295/100‑1 (MQ=255)
                                                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                         >  1:2419047/1‑100 (MQ=255)
                                                            gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                        <  1:2773984/100‑1 (MQ=255)
                                                            gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                        <  2:2671300/100‑1 (MQ=255)
                                                            gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                        <  2:3484233/100‑1 (MQ=255)
                                                             gcgcgcctccaccaacgcctgatacacctacccgtagGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                         >  1:1532232‑M1/38‑98 (MQ=255)
                                                               aTTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAgg                                     <  2:3085796/100‑1 (MQ=255)
                                                                tttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgc                                    <  2:2969278/100‑1 (MQ=255)
                                                                tttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgc                                    >  2:2649618/1‑100 (MQ=255)
                                                                 ttttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcg                                   >  1:454018/1‑100 (MQ=255)
                                                                  tttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgc                                  >  2:1471151/1‑100 (MQ=255)
                                                                   ttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGTCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgcg                                 <  1:1377025/100‑1 (MQ=255)
                                                                   ttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgcg                                 >  2:1299675/1‑100 (MQ=255)
                                                                     gAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCt                               <  2:742601/100‑1 (MQ=255)
                                                                       acccaagccggagatacgtacccgtggGCCGGATGCGCCGCCAGGCGCGGCTGATGCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTcc                             >  1:1645479‑M1/28‑100 (MQ=255)
                                                                       aTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTcc                             >  2:1511718/1‑100 (MQ=255)
                                                                        ttACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCa                            <  1:3169124/100‑1 (MQ=255)
                                                                        ttACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCa                            <  1:1824460/100‑1 (MQ=255)
                                                                         tACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaa                           >  2:2531846/1‑100 (MQ=255)
                                                                          ccgatcTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaa                          <  2:776343/95‑1 (MQ=255)
                                                                          aCCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaa                          >  2:2691690/1‑100 (MQ=255)
                                                                           ccGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAAt                         <  1:544297/100‑1 (MQ=255)
                                                                             ggCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATcc                       >  2:3150336/1‑100 (MQ=255)
                                                                              gCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCa                      <  1:41898/100‑1 (MQ=255)
                                                                               cTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                     <  2:2217125/100‑1 (MQ=255)
                                                                                tttGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAgg                    <  1:3520422/100‑1 (MQ=255)
                                                                                 ttagTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGt                   <  1:1404445/97‑1 (MQ=255)
                                                                                 ttGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaaagatcgg                   >  1:776339/1‑93 (MQ=255)
                                                                                   ggTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                 <  2:2820043/100‑1 (MQ=255)
                                                                                   ggTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                 <  2:2793280/100‑1 (MQ=255)
                                                                                   ggTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                 <  1:2983929/100‑1 (MQ=255)
                                                                                     tGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTGTCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGaa               <  2:1577911/100‑1 (MQ=255)
                                                                                     tGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGaa               >  2:1523378/1‑100 (MQ=255)
                                                                                     tGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGaa               <  1:2927548/100‑1 (MQ=255)
                                                                                      gCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAAc              <  2:1988829/100‑1 (MQ=255)
                                                                                       cGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACa             <  1:1781154/100‑1 (MQ=255)
                                                                                         gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaa           >  1:1952656/1‑100 (MQ=255)
                                                                                         gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaa           >  2:806837/1‑100 (MQ=255)
                                                                                            tGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACa        >  1:2867237/1‑100 (MQ=255)
                                                                                                 tGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATacac   >  2:1405487/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
TTCCAGAGGAACATTGTCGATTTTTCGCGCATTGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACA  >  NC_000913/4240059‑4240256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.