BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4240157 =	NA (NA)	12 (0.100)	7/164	NT	NA	noncoding (1/37 nt)	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	4240190 =	NA (NA)	12 (0.100)	7/164	NT	NA	noncoding (34/37 nt)	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP314 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 188 total aligned reads displayed.

TGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTA  >  NC_000913/4240091‑4240289

tGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCTGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                                                     >  1:2267091/1‑100 (MQ=255)

tGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGcc                                                                                                     <  1:1011256/100‑1 (MQ=255)

 gCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCt                                                                                                    <  2:1425338/100‑1 (MQ=255)

 gCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCt                                                                                                    >  1:3506908/1‑100 (MQ=255)

  cTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTa                                                                                                   <  2:3259841/100‑1 (MQ=255)

    ggtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACg                                                                                                 >  1:105293/1‑100 (MQ=255)

    ggtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACg                                                                                                 >  2:611817/1‑100 (MQ=255)

     gtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACgg                                                                                                <  2:1923270/100‑1 (MQ=255)

     gtggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACgg                                                                                                <  1:141536/100‑1 (MQ=255)

      tggCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACggg                                                                                               >  1:727545/1‑100 (MQ=255)

        ncTGGGAAGCAGCTGAATGGGTCAATTATCACTTACCGGCCTAGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggt                                                                                              >  1:2703129/2‑99 (MQ=255)

        gCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggta                                                                                             <  2:1470879/100‑1 (MQ=255)

         cTGGGAATCACCTGAATGGGTGATTTTTTTTTTTTTTTCTTTGGTGCGGTTTGTCTTGCTGGTTGCGCTGCTAGGCGCGGCTTATCCGGCCTACTgttag                                                                                            >  1:528998/1‑100 (MQ=255)

         cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                                                            >  2:1012079/1‑100 (MQ=255)

         cTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtag                                                                                            >  1:2463003/1‑100 (MQ=255)

          tGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtagg                                                                                           <  2:522203/100‑1 (MQ=255)

           gggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                                                          <  2:1904713/100‑1 (MQ=255)

           gggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTCCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggt                                                                                          <  1:2269351/100‑1 (MQ=255)

            ggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggta                                                                                         <  1:3157757/100‑1 (MQ=255)

            ggAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGggtaggta                                                                                         >  2:2587995/1‑100 (MQ=255)

                tctccTGAATGGGTGATTTTTGAGTTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGtata                                                                                       <  1:3011426/95‑1 (MQ=255)

                   ccTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCgg                                                                                  >  1:2820025/1‑100 (MQ=255)

                    cTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGGCTGCGGGGAGGTATGTCCgg                                                                                  >  2:3118449/1‑99 (MQ=255)

                    cTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGc                                                                                 >  2:3118694/1‑100 (MQ=255)

                    cTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGc                                                                                 <  1:1141693/100‑1 (MQ=255)

                    cTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGc                                                                                 >  1:1597136/1‑100 (MQ=255)

                     tGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCt                                                                                >  2:106807/1‑100 (MQ=255)

                      gAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCtt                                                                               >  1:3240628/1‑100 (MQ=255)

                      gAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCt                                                                                >  1:2864501/1‑99 (MQ=255)

                        aTGGGTGATTTTTGAATTACCGGCTTCGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGGGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtg                                                                             <  2:2669258/100‑1 (MQ=255)

                         tGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtgg                                                                            <  1:2752053/100‑1 (MQ=255)

                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                                                          <  2:2075206/100‑1 (MQ=255)

                           ggTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                                                          >  1:2419047/1‑100 (MQ=255)

                            gTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtgg                                                                         <  2:3484233/100‑1 (MQ=255)

                             tGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTtggtg                                                                          <  1:2113297/98‑1 (MQ=255)

                             tGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGa                                                                        <  2:405043/100‑1 (MQ=255)

                                 ttttGAATTACCGGCTTTGGTGTGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcg                                                                    >  1:1374351/1‑100 (MQ=255)

                                   ttGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGgcgcg                                                                  >  2:1299675/1‑100 (MQ=255)

                                     gAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCt                                                                <  2:742601/100‑1 (MQ=255)

                                      caccaaagccggatatacctacccgtaggccggataagccgcgcctggcggcgcatccggcCTACGGGTAGGTGTATCAGGCGTTGGTGGAGgcgcgc                                                                 >  1:1532232‑M2/62‑98 (MQ=255)

                                       acccaagccggagatacgtacccgtggGCCGGATGCGCCGCCAGGCGCGGCTGATGCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTcc                                                              >  1:1645479‑M1/28‑100 (MQ=255)

                                        ttACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCa                                                             <  1:3169124/100‑1 (MQ=255)

                                        ttACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGACGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCa                                                             >  2:1372071/1‑100 (MQ=255)

                                         tACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaa                                                            >  2:2531846/1‑100 (MQ=255)

                                          ccgatcTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaa                                                           <  2:776343/95‑1 (MQ=255)

                                          aCCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaa                                                           >  2:2998581/1‑100 (MQ=255)

                                          aCCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaa                                                           >  1:2216768/1‑100 (MQ=255)

                                          aCCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCaaa                                                           <  2:1336111/100‑1 (MQ=255)

                                           ccGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAAt                                                          <  1:544297/100‑1 (MQ=255)

                                            cGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATc                                                         <  2:227878/100‑1 (MQ=255)

                                             ggCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATcc                                                        >  2:3150336/1‑100 (MQ=255)

                                             ggCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATcc                                                        >  2:2006064/1‑100 (MQ=255)

                                             ggCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATc                                                         >  1:3363005/1‑99 (MQ=255)

                                              gCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCa                                                       <  2:2910548/100‑1 (MQ=255)

                                               cTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAg                                                      <  1:302234/100‑1 (MQ=255)

                                                tttGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAgg                                                     <  1:3276171/100‑1 (MQ=255)

                                                 ttagTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGt                                                    <  1:1404445/97‑1 (MQ=255)

                                                   ggTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                                                  <  1:2983929/100‑1 (MQ=255)

                                                   ggTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                                                  <  2:2793280/100‑1 (MQ=255)

                                                   ggTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTg                                                  <  2:2820043/100‑1 (MQ=255)

                                                    gTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGa                                                 >  1:427983/1‑100 (MQ=255)

                                                     tGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGaa                                                <  1:2927548/100‑1 (MQ=255)

                                                     tGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGaa                                                >  2:1522320/1‑100 (MQ=255)

                                                      gCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAAc                                               <  1:3539821/100‑1 (MQ=255)

                                                       cGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACa                                              <  1:1781154/100‑1 (MQ=255)

                                                         gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaa                                            >  1:1952656/1‑100 (MQ=255)

                                                         gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaa                                            >  2:3246888/1‑100 (MQ=255)

                                                         gTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACaaa                                            >  2:806837/1‑100 (MQ=255)

                                                           ttGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAAc                                          <  1:1394130/100‑1 (MQ=255)

                                                            ttccgatctggataagccgcgcctggcggcgcatccggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACa                                         <  1:1789529‑M2/61‑1 (MQ=255)

                                                            tGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACa                                         >  1:2867237/1‑100 (MQ=255)

                                                                ttGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATaca                                     <  1:2171067/100‑1 (MQ=255)

                                                                 ggccggataagccgcgcctggcggcgcatccggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATacac                                    >  2:1984642‑M2/35‑100 (MQ=255)

                                                                 ggccggataagccgcgcctggcggcgcatccggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATacac                                    >  1:1102650‑M2/35‑100 (MQ=255)

                                                                  GCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCATTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAAGATAcaca                                   <  1:2823472‑M1/100‑1 (MQ=255)

                                                                    cggataagccgcgcctggcggcgcatccggcCTACGGGTAGGTATATCCGACTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACaaa                                 >  1:1242769‑M2/32‑100 (MQ=255)

                                                                     ggataagccgcgcctggcggcgcatccggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTgaacaaaacaagatcggaa                                >  2:1789538‑M2/31‑91 (MQ=255)

                                                                       ATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACaaaaaa                              >  2:1597143‑M1/1‑100 (MQ=255)

                                                                        TGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAAt                             >  2:1749632‑M1/1‑100 (MQ=255)

                                                                          cgccgcCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAatat                           >  1:1884806/1‑100 (MQ=255)

                                                                          cgccgcCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAatat                           >  1:1437430/1‑100 (MQ=255)

                                                                           gccgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAAtata                          <  2:455080/100‑1 (MQ=255)

                                                                           gccgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAAtata                          >  2:884375/1‑100 (MQ=255)

                                                                            ccgccAGGCGCGGCTTATCGGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAg                         <  1:1523664/100‑1 (MQ=255)

                                                                            ccgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAg                         <  2:2132321/100‑1 (MQ=255)

                                                                             cgccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGa                        <  2:1483338/100‑1 (MQ=255)

                                                                             cgccAGGCGCCGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGAGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGa                        <  1:847441/100‑1 (MQ=255)

                                                                               ccAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGAtc                      <  2:459975/100‑1 (MQ=255)

                                                                                   gcgcGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCg                  >  2:2689514/1‑100 (MQ=255)

                                                                                   gcgcGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCg                  <  1:2649601/100‑1 (MQ=255)

                                                                                     tcgGCTTATCCGGCCTACGGGTAAGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCgn                 <  2:1573804/98‑2 (MQ=255)

                                                                                           tATCCGGCCTACGGGTAGGTATATACGGCTTTGGTGGAGGCGCGCTACAAATCCAGGTTGAACAAAACATACACAAAAAATATAGCTCTCCGTCACAttt          <  2:713053/100‑1 (MQ=255)

                                                                                            atccggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACAtttt         >  1:2002547‑M2/8‑100 (MQ=255)

                                                                                              ccggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTg       <  2:1374358‑M2/95‑1 (MQ=255)

                                                                                              ccggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTg       <  1:2006054‑M2/95‑1 (MQ=255)

                                                                                              ccggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTg       <  1:3426185‑M2/95‑1 (MQ=255)

                                                                                               cggcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGc      >  2:3447845‑M2/5‑100 (MQ=255)

                                                                                                 gcCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCg     >  1:3035843‑M2/3‑99 (MQ=255)

                                                                                                  cCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATATACAAAAAATATAGATCTCCGTCACATTTTTGCGtt   <  1:1155156‑M2/99‑1 (MQ=255)

                                                                                                   cTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCAAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTta  >  1:128528/1‑100 (MQ=255)

TGCTGGTGGCTGGGAATCACCTGAATGGGTGATTTTTGAATTACCGGCTTTGGTGCGGTTTGTCTTGCCGGATGCGCCGCCAGGCGCGGCTTATCCGGCCTACGGGTAGGTATATCCGGCTTTGGTGGAGGCGCGCTCCAAATCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTA  >  NC_000913/4240091‑4240289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.