New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4576621 =147 (1.150)6 (0.050) 6/168 NT 4.3% pseudogene (2703/2937 nt) yjiV pseudogene; conserved hypothetical protein
?NC_000913 4576644 = 126 (1.040)pseudogene (2726/2937 nt) yjiV pseudogene; conserved hypothetical protein
Rejected: Frequency below cutoff threshold.

Only 100 of 175 total aligned reads displayed.

GAGCATAGCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGC  >  NC_000913/4576522‑4576718
                                                                                                   |                                                                                                 
gAGCATAGCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCt                                                                                                   <  2:3213096/100‑1 (MQ=255)
 aGCATAGCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTc                                                                                                  >  2:2169301/1‑100 (MQ=255)
 aGCATAGCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTc                                                                                                  >  2:2129014/1‑100 (MQ=255)
 aGCATAGCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTc                                                                                                  <  2:558588/100‑1 (MQ=255)
  gCATAGCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCa                                                                                                 <  1:880373/100‑1 (MQ=255)
  cggaaatcaaagtaatgccattgcgatgaaaagttgatgcgccagtagcccatcccctgatcgaagcggatcttcaatacctgaccatcctcaaaagTCa                                                                                                 >  1:532603‑M1/98‑100 (MQ=255)
     tAGCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCa                                                                                              >  2:779263/1‑100 (MQ=255)
       gCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATc                                                                                            >  1:753757/1‑100 (MQ=255)
       gCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATc                                                                                            <  2:3064903/100‑1 (MQ=255)
        cGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCg                                                                                           >  1:2273345/1‑100 (MQ=255)
         ggATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATACCTCACTATCGt                                                                                          >  1:2670740/1‑100 (MQ=255)
         ggATTTTCAGGATTTCGCTGATCAGTGGGTTGCTGCTGCGCTGGGCAGGCGGGTAGAACTGACGGTGTTTGACTCGCCGCGCGATATCCCTCACCAt                                                                                             >  2:968023/1‑97 (MQ=255)
             tttCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAAc                                                                                      <  1:190432/100‑1 (MQ=255)
              ttCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACt                                                                                     >  1:2585316/1‑100 (MQ=255)
              ttCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACt                                                                                     >  2:931718/1‑100 (MQ=255)
              ttCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACt                                                                                     >  2:1553072/1‑100 (MQ=255)
               tCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTg                                                                                    <  1:222093/100‑1 (MQ=255)
                cacgATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATACCCCTCACCATCGTa                                                                                         >  1:2361160/4‑94 (MQ=255)
                 aGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGAc                                                                                  >  1:3528048/1‑100 (MQ=255)
                  ggATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGAGCGATATCCCTCACCATCGTAGACTGACg                                                                                 <  1:1417362/100‑1 (MQ=255)
                    aTTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGTCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACgg                                                                                <  1:1886339/99‑1 (MQ=255)
                     tttCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCCCCCTCGGAAACTGACgg                                                                                >  2:3393106/1‑98 (MQ=255)
                     tttCGCTGATCAGTGGTTTGCTGCTGCGCTCGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTg                                                                              <  1:2270039/100‑1 (MQ=255)
                       tCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTGACCATCGTAAACTGACGGTGAc                                                                            >  1:3345548/1‑100 (MQ=255)
                        gcgatgaaaagttgatgcgccagtagcccatcccctgatcgaagcggatcttcaatacctgaccatcctcaaaagTCACCATCGTAAACTGACGGTGACt                                                                           >  1:2442607‑M1/76‑100 (MQ=255)
                        cGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGAc                                                                            >  2:2576158/1‑99 (MQ=255)
                        cGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACt                                                                           >  2:3445916/1‑100 (MQ=255)
                        cGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACt                                                                           >  1:3173622/1‑100 (MQ=255)
                        cGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACt                                                                           >  1:3173556/1‑100 (MQ=255)
                          cTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACttt                                                                         >  1:1308679/1‑100 (MQ=255)
                           tGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACtttt                                                                        >  2:2814023/1‑100 (MQ=255)
                            gATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTg                                                                       >  1:1692392/1‑100 (MQ=255)
                            gATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTg                                                                       >  2:1215849/1‑100 (MQ=255)
                              tCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAg                                                                     <  1:1677282/100‑1 (MQ=255)
                              tCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAg                                                                     <  2:274268/100‑1 (MQ=255)
                              tCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAg                                                                     <  2:1308528/100‑1 (MQ=255)
                              tCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAg                                                                     <  1:788296/100‑1 (MQ=255)
                              tCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAg                                                                     <  1:3430607/100‑1 (MQ=255)
                               catttgTTTTCTGCTGCGCCGGGCAGGCCGGTAGAACCTACGCTGTTCGACTCGCCGCGCCATATCCCTCACCTTCGTAAACTGACGGTGACTTTTGAg                                                                     <  1:2743038/94‑1 (MQ=255)
                               cAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAgg                                                                    <  2:1457096/100‑1 (MQ=255)
                                 gTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGa                                                                      <  1:3035743/96‑1 (MQ=255)
                                   ggTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGGCGGTGTTCGACTCGGCGCGCGCTATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATg                                                                 <  1:2138099/99‑1 (MQ=255)
                                   ggTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATgg                                                                >  2:1816950/1‑100 (MQ=255)
                                   ggTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATgg                                                                >  1:1912505/1‑100 (MQ=255)
                                    gTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGt                                                               >  1:1027675/1‑100 (MQ=255)
                                     tttGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTc                                                              <  2:2258702/100‑1 (MQ=255)
                                     tttGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTc                                                              >  1:2359867/1‑100 (MQ=255)
                                      ttGCTGCCGCGCGGGGCAGGCTGGTAGAACTGACGCTGTTCGACTCGCCGCGCGATATCCCTGACCATCGTAAACTGACGGTGACTTTTGAGGATgg                                                                <  1:1089741/97‑1 (MQ=255)
                                        gctgctgcGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAgg                                                           <  2:1984400/100‑1 (MQ=255)
                                         ctgctgcGCTGGGCAGGCCGGTAGAACTGGCGGTGGTCGACTCGCCGCGCGATATACCTCACCATCGTAAACTGACGGTGACGGTTGAGGGTGGTGAGGt                                                          >  1:473498/1‑100 (MQ=255)
                                           gctgcGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTAt                                                        >  1:2542358/1‑100 (MQ=255)
                                              gcgcTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGa                                                     >  2:3429867/1‑100 (MQ=255)
                                              gcgcTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCAGCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTAtt                                                       <  1:2873728/98‑1 (MQ=255)
                                               cgcTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGaa                                                    >  1:2217835/1‑100 (MQ=255)
                                               cgcTGGGCAGGCCGGTAGAACTGACGGAGTTCGACTCGCCGCGCGATATCGCTCACTGTCGTAAACTAACGGTGACGTTTGAGGATGGTCAAGTAGTGa                                                     >  1:233834/1‑99 (MQ=255)
                                                gcTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAg                                                   <  1:3411506/100‑1 (MQ=255)
                                                gcTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAg                                                   <  1:2014532/100‑1 (MQ=255)
                                                 gcccatcccctgatcgaagcggatcttcaatacctgtccatcctcaaaagTCGCCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAg                                                   >  2:2956758‑M1/51‑99 (MQ=255)
                                                 cTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGa                                                  >  2:23670/1‑100 (MQ=255)
                                                   gggCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATc                                                >  1:3447043/1‑100 (MQ=255)
                                                   gggCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATc                                                <  2:2542375/100‑1 (MQ=255)
                                                    ggCAGGCCGGTAGAACTGACGTTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATcc                                               <  2:340039/100‑1 (MQ=255)
                                                    ggCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATcc                                               >  2:178325/1‑100 (MQ=255)
                                                        ggCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCt                                            <  1:2296324/99‑1 (MQ=255)
                                                         gCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTc                                          <  2:211490/100‑1 (MQ=255)
                                                          ccGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCg                                         >  2:1903440/1‑100 (MQ=255)
                                                                gAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAgg                                   <  1:360616/100‑1 (MQ=255)
                                                                 aaCTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAggg                                  >  1:3543982/1‑100 (MQ=255)
                                                                    tGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGAt                               >  2:1080508/1‑100 (MQ=255)
                                                                     gACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATg                              >  1:368042/1‑100 (MQ=255)
                                                                     gACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATg                              <  1:928979/100‑1 (MQ=255)
                                                                     gACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATg                              >  1:1508247/1‑100 (MQ=255)
                                                                        ggTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGc                           <  1:685896/100‑1 (MQ=255)
                                                                         gtgtTCGTCTCGCCGGGCGATATCACTCACCGTCGTAAACTGACGGTGGATTTTGATGATGGACAGGTATTGAAGTTCCGCTTCGATCAGGGGATg                              <  1:2931836/96‑1 (MQ=255)
                                                                          tgtTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTa                         >  2:2084535/1‑100 (MQ=255)
                                                                           gtTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTAc                        >  2:399703/1‑100 (MQ=255)
                                                                           gtTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTAc                        >  1:2617760/1‑100 (MQ=255)
                                                                           gtTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTAc                        <  2:3173578/100‑1 (MQ=255)
                                                                            ttCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACt                       <  2:1585468/100‑1 (MQ=255)
                                                                            ttCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACt                       >  2:1242380/1‑100 (MQ=255)
                                                                             tCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTg                      >  2:3074486/1‑100 (MQ=255)
                                                                                aCTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGgcg                   <  1:3118268/100‑1 (MQ=255)
                                                                                  tCGCCGCGCGATATACCCCACCATCGTAAACTCACGGTGACTTGTAAGGATGGTCAGGTATTGAAGACCCGATTCGATCAGGCGATGGGCTACTGGCGCa                 <  1:1054580/100‑1 (MQ=255)
                                                                                   cgccgcGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCAt                >  2:11245/1‑100 (MQ=255)
                                                                                   cgccgcGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTAAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCAt                >  2:3008732/1‑100 (MQ=255)
                                                                                    gccgcGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATc               <  1:607535/100‑1 (MQ=255)
                                                                                         gcgATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACtt          >  2:45133/1‑100 (MQ=255)
                                                                                          cgATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACttt         >  2:61614/1‑100 (MQ=255)
                                                                                           gATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACtttt        <  1:11245/100‑1 (MQ=255)
                                                                                            atatCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTc       <  2:1807186/100‑1 (MQ=255)
                                                                                             tatCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCa      <  1:1816941/100‑1 (MQ=255)
                                                                                             tatCCCTAACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCa      <  2:67385/100‑1 (MQ=255)
                                                                                               tCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCAtn    <  1:2167449/100‑2 (MQ=255)
                                                                                               tCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATc    <  2:1332803/100‑1 (MQ=255)
                                                                                               tCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATc    >  1:2105284/1‑100 (MQ=255)
                                                                                                cccTCACCATCGTAAACTGACGGTGACTGTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCg   <  2:3118400/100‑1 (MQ=255)
                                                                                                 ccTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGc  >  2:327962/1‑100 (MQ=255)
                                                                                                 ccTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGc  >  1:1356707/1‑100 (MQ=255)
                                                                                                 ccTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGc  <  1:652842/100‑1 (MQ=255)
                                                                                                 ccTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGc  >  2:2338536/1‑100 (MQ=255)
                                                                                                   |                                                                                                 
GAGCATAGCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGC  >  NC_000913/4576522‑4576718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.