New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4576621 =147 (1.150)6 (0.050) 6/168 NT 4.3% pseudogene (2703/2937 nt) yjiV pseudogene; conserved hypothetical protein
?NC_000913 4576644 = 126 (1.040)pseudogene (2726/2937 nt) yjiV pseudogene; conserved hypothetical protein
Rejected: Frequency below cutoff threshold.

Only 100 of 165 total aligned reads displayed.

TCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGA  >  NC_000913/4576545‑4576743
                                                                                                    |                                                                                                   
tCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTGACCATC‑GTAAACTGACGGTGAc                                                                                                     >  1:3345548/1‑100 (MQ=255)
 gcgatgaaaagttgatgcgccagtagcccatcccctgatcgaagcggatcttcaatacctgaccatcctcaaaagTCACCATC‑GTAAACTGACGGTGACt                                                                                                    >  1:2442607‑M1/76‑100 (MQ=255)
 cGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGAc                                                                                                     >  2:2576158/1‑99 (MQ=255)
 cGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACt                                                                                                    >  1:3173556/1‑100 (MQ=255)
 cGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACt                                                                                                    >  2:3445916/1‑100 (MQ=255)
  gCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACtt                                                                                                   >  1:3457658/1‑100 (MQ=255)
   gatgaaaagttgatgcgccagtagcccatcccctgatcgaagcggatcttcaatacctgaccatcctcaaaagTCACCATC‑GTAAACTGACGGTGACttt                                                                                                  >  1:2218019‑M1/74‑100 (MQ=255)
     gATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTg                                                                                                >  2:1215849/1‑100 (MQ=255)
     gATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTg                                                                                                >  1:2290793/1‑100 (MQ=255)
     gATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTg                                                                                                >  1:1692392/1‑100 (MQ=255)
       tCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAg                                                                                              <  2:274268/100‑1 (MQ=255)
       tCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAg                                                                                              <  2:1308528/100‑1 (MQ=255)
       tCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAg                                                                                              <  1:3430607/100‑1 (MQ=255)
       tCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAg                                                                                              <  1:1677282/100‑1 (MQ=255)
        catttgTTTTCTGCTGCGCCGGGCAGGCCGGTAGAACCTACGCTGTTCGACTCGCCGCGCCATATCCCTCACCTTC‑GTAAACTGACGGTGACTTTTGAg                                                                                              <  1:2743038/94‑1 (MQ=255)
        aaagttgatgcgccagtagctcatccccttatcgaagctgatctttaatacctgaccatcctcaaaagTCACCATC‑GTAAACTGACGGTGACTTTTGAg                                                                                              >  1:2389029‑M1/69‑99 (MQ=255)
         aaagttgatgcgccagtagcccatcccctgatcgaagcggatcttcaatacctgaccatcctcaaaagtcaccatcgtatactgacggtgaCTTTTGAgg                                                                                             <  1:2178657‑M2/9‑1 (MQ=255)
            ggTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGGCGGTGTTCGACTCGGCGCGCGCTATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATg                                                                                          <  1:2138099/99‑1 (MQ=255)
            ggTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATgg                                                                                         >  2:1816950/1‑100 (MQ=255)
            ggTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATgg                                                                                         <  2:326681/100‑1 (MQ=255)
             gTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGt                                                                                        >  1:1027675/1‑100 (MQ=255)
              tttGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTc                                                                                       <  2:2258702/100‑1 (MQ=255)
              tttGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTc                                                                                       >  2:2798325/1‑100 (MQ=255)
                 gctgctgcGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAgg                                                                                    <  1:1093729/100‑1 (MQ=255)
                  ctgctgcGCTGGGCAGGCCGGTAGAACTGGCGGTGGTCGACTCGCCGCGCGATATACCTCACCATC‑GTAAACTGACGGTGACGGTTGAGGGTGGTGAGGt                                                                                   >  1:473498/1‑100 (MQ=255)
                    gctgcGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTAt                                                                                 >  1:2542358/1‑100 (MQ=255)
                      tgcGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTg                                                                               <  1:3141634/100‑1 (MQ=255)
                       gcgcTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGa                                                                              <  2:1957605/100‑1 (MQ=255)
                       gcgcTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGa                                                                              >  2:3429867/1‑100 (MQ=255)
                       gcgcTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCAGC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTAtt                                                                                <  1:2873728/98‑1 (MQ=255)
                        cgcTGGGCAGGCCGGTAGAACTGACGGAGTTCGACTCGCCGCGCGATATCGCTCACTGTC‑GTAAACTAACGGTGACGTTTGAGGATGGTCAAGTAGTGa                                                                              >  1:233834/1‑99 (MQ=255)
                            gggCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATc                                                                         >  2:2341633/1‑100 (MQ=255)
                            gggCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATc                                                                         >  2:2336955/1‑100 (MQ=255)
                            gggCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATc                                                                         <  2:858924/100‑1 (MQ=255)
                             ggCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATcc                                                                        >  2:178325/1‑100 (MQ=255)
                               cAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGc                                                                      <  1:357718/100‑1 (MQ=255)
                                 ggCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCtt                                                                    <  1:234367/100‑1 (MQ=255)
                                 ggCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCtt                                                                    >  2:1112025/1‑100 (MQ=255)
                                 ggCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCt                                                                     <  1:2296324/99‑1 (MQ=255)
                                  gCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTc                                                                   <  1:3045740/100‑1 (MQ=255)
                                  gCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTc                                                                   <  2:211490/100‑1 (MQ=255)
                                       tAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCa                                                              <  2:1495832/100‑1 (MQ=255)
                                          aaCTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAggg                                                           >  1:3543982/1‑100 (MQ=255)
                                          aaCTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAggg                                                           <  2:2467569/100‑1 (MQ=255)
                                          aaCTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAggg                                                           <  1:266961/100‑1 (MQ=255)
                                              gACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATg                                                       >  1:368042/1‑100 (MQ=255)
                                              gACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATg                                                       >  1:1508247/1‑100 (MQ=255)
                                              gACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATg                                                       <  1:928979/100‑1 (MQ=255)
                                               aCGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATgg                                                      <  2:1263336/100‑1 (MQ=255)
                                                 ggTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGc                                                    <  1:685896/100‑1 (MQ=255)
                                                  gtgtTCGTCTCGCCGGGCGATATCACTCACCGTC‑GTAAACTGACGGTGGATTTTGATGATGGACAGGTATTGAAGTTCCGCTTCGATCAGGGGATg                                                       <  1:2931836/96‑1 (MQ=255)
                                                   tgtTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTa                                                  >  2:2084535/1‑100 (MQ=255)
                                                   cttcaatacctgaccatcctcaaaagtcaccgtcagtttacgatggcgaCTTTTGAGGATGGACAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGc                                                    >  2:2956758‑M2/50‑99 (MQ=255)
                                                    gtTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTAc                                                 >  2:399703/1‑100 (MQ=255)
                                                    gtTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTAc                                                 >  2:1059724/1‑100 (MQ=255)
                                                    gtTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTAc                                                 <  2:3173578/100‑1 (MQ=255)
                                                    gtTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTAc                                                 >  1:2617760/1‑100 (MQ=255)
                                                     ttCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACt                                                <  2:1585468/100‑1 (MQ=255)
                                                      tCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTg                                               >  2:3074486/1‑100 (MQ=255)
                                                           tCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCa                                          <  1:779259/100‑1 (MQ=255)
                                                           tCGCCGCGCGATATACCCCACCATC‑GTAAACTCACGGTGACTTGTAAGGATGGTCAGGTATTGAAGACCCGATTCGATCAGGCGATGGGCTACTGGCGCa                                          <  1:1054580/100‑1 (MQ=255)
                                                            cgccgcGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCAt                                         >  1:322781/1‑100 (MQ=255)
                                                             gccgcGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATc                                        <  1:607535/100‑1 (MQ=255)
                                                                gcgcgATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAAc                                     >  2:1237900/1‑100 (MQ=255)
                                                                 catcctcaaaagtcaccgtcagtttacgatggtgaCTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAAc                                     >  1:2556452‑M2/36‑100 (MQ=255)
                                                                  gcgATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACtt                                   >  2:45133/1‑100 (MQ=255)
                                                                   cgATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACttt                                  >  2:61614/1‑100 (MQ=255)
                                                                   cctcaaaagTCACCGTCAGTATAC‑GATGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACttt                                  <  1:2178657‑M1/91‑1 (MQ=255)
                                                                    gATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACtttt                                 <  1:11245/100‑1 (MQ=255)
                                                                      tatCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCa                               >  1:1898890/1‑100 (MQ=255)
                                                                      tatCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCa                               <  1:1816941/100‑1 (MQ=255)
                                                                      tatCCCTAACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCa                               <  2:67385/100‑1 (MQ=255)
                                                                       atCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCAt                              <  1:3429842/100‑1 (MQ=255)
                                                                        tCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATc                             <  2:1332803/100‑1 (MQ=255)
                                                                        tCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATc                             >  1:2105284/1‑100 (MQ=255)
                                                                        tCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATc                             >  1:1940430/1‑100 (MQ=255)
                                                                         cccTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCg                            >  1:1415567/1‑100 (MQ=255)
                                                                          ccTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGc                           <  1:2091265/100‑1 (MQ=255)
                                                                          ccTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGc                           >  1:1356707/1‑100 (MQ=255)
                                                                          ccTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGc                           <  1:652842/100‑1 (MQ=255)
                                                                             CACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAAt                        >  2:978808‑M1/1‑100 (MQ=255)
                                                                             CACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAAt                        >  1:253957‑M1/1‑100 (MQ=255)
                                                                               CCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATgg                      <  1:243334‑M1/100‑1 (MQ=255)
                                                                                 aTC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCa                    >  1:3313707/1‑100 (MQ=255)
                                                                                   c‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCAtt                  <  2:2900386/100‑1 (MQ=255)
                                                                                   c‑GTAAACAGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATTGGCTACTGGCGCATCAACTTTTCATCGCAATGGCAtt                  <  1:1903430/100‑1 (MQ=255)
                                                                                    cttAAACTGACGGAGACTTTTGAGGATGGTCGGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCAtt                  >  2:2393730/3‑100 (MQ=255)
                                                                                     gTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTa                 <  1:1293682/100‑1 (MQ=255)
                                                                                     gTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTa                 >  2:3495945/1‑100 (MQ=255)
                                                                                       aaaCTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACt               >  1:726802/1‑100 (MQ=255)
                                                                                        aaCTGGCGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACtt              <  1:488416/100‑1 (MQ=255)
                                                                                         aCTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACttt             <  1:915114/100‑1 (MQ=255)
                                                                                         aCTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACttt             >  2:3217883/1‑100 (MQ=255)
                                                                                          cTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTg            >  2:2821657/1‑100 (MQ=255)
                                                                                          cTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTg            <  2:2088101/100‑1 (MQ=255)
                                                                                              cGGTGACTTTTGAGGATGGTAAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGAtt         >  1:2469231/1‑99 (MQ=255)
                                                                                               ggtgaCTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTc       >  2:3069855‑M2/6‑100 (MQ=255)
                                                                                                 tgaCTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCcg     >  1:532603‑M2/4‑100 (MQ=255)
                                                                                                   aCTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCcgcg   <  2:3317342‑M2/99‑1 (MQ=255)
                                                                                                    cTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGa  >  2:1836228/1‑100 (MQ=255)
                                                                                                    |                                                                                                   
TCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATC‑GTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGA  >  NC_000913/4576545‑4576743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.