New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 220445783 (0.650)16 (0.140) 10/156 NT 15.4% intergenic (+168/‑139) yehK/yehL uncharacterized protein/putative hexameric AAA+ MoxR family ATPase
?NC_000913 = 2204480 103 (0.920)intergenic (+191/‑116) yehK/yehL uncharacterized protein/putative hexameric AAA+ MoxR family ATPase

Only 100 of 150 total aligned reads displayed.

AGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATAC  >  NC_000913/2204381‑2204578
                                                                                                   |                                                                                                  
aGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt                                                                                                    >  2:933636/1‑100 (MQ=255)
 tccgatcttataattcGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTt                                                                                                   >  1:3464372‑M2/8‑99 (MQ=255)
 gCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTt                                                                                                   <  2:2625196‑M2/100‑2 (MQ=255)
  ccGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTtt                                                                                                  <  1:517219‑M2/100‑3 (MQ=255)
   cGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTttt                                                                                                 <  1:3149223‑M2/100‑4 (MQ=255)
    gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAAGCTGTGGCGTTAGGCCTGAAAATATTAAATAAAAGAACCTGCCTCACCAGCAGGTTTtttt                                                                                                >  1:823434‑M2/1‑96 (MQ=255)
     tGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTtttta                                                                                               >  2:3426893‑M2/1‑95 (MQ=255)
     tGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTtttta                                                                                               >  1:856077‑M2/1‑95 (MQ=255)
        ttATACTTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAGATAAAAGCACCTGCATCACCAGCAGGTTAttttattt                                                                                            <  1:2402668‑M2/100‑9 (MQ=255)
          ataATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAGAAGAACCTGCCTCACCAGCAGGTTTttttatttac                                                                                          <  1:3475935‑M2/100‑11 (MQ=255)
           taATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTttttatttact                                                                                         >  1:1529681‑M2/1‑89 (MQ=255)
           taATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTttttatttact                                                                                         <  1:1630358‑M2/100‑12 (MQ=255)
            aaTTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtg                                                                                        <  2:1012035/100‑1 (MQ=255)
              ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtgtg                                                                                      <  2:1693415/100‑1 (MQ=255)
              ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtgtg                                                                                      <  1:1913023/100‑1 (MQ=255)
                   tcgttGGAACACGATGTTGCACAGGCTGCGGTGTTAGGCCTGAAACTAGTAAATCAAAGAACATGCCCCACCAGCCGGATCTTTTATTTACtgaaatc                                                                                   >  1:1036863/1‑93 (MQ=255)
                    cgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGc                                                                                >  2:1313507/1‑100 (MQ=255)
                    cgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGc                                                                                >  2:2102414/1‑100 (MQ=255)
                      ttGGAACACGATGTTGCAGAGGCTGTGGTTTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGc                                                                                <  1:2345192/98‑1 (MQ=255)
                       tGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCttt                                                                             >  2:1882571/1‑100 (MQ=255)
                        ggAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTc                                                                            >  1:1154904/1‑100 (MQ=255)
                         gAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTcc                                                                           >  2:2267270/1‑100 (MQ=255)
                         gAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTcc                                                                           <  2:3507513/100‑1 (MQ=255)
                           acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAg                                                                         <  2:2457102/100‑1 (MQ=255)
                           acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAg                                                                         >  1:9880/1‑100 (MQ=255)
                           acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAg                                                                         <  1:2659348/100‑1 (MQ=255)
                                  gTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAtttt                                                                  >  2:2060683/1‑100 (MQ=255)
                                   ttGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAttttt                                                                 <  2:3077819/100‑1 (MQ=255)
                                    tGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcct                                                                <  2:966118‑M2/100‑37 (MQ=255)
                                    tGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                                                >  2:3480283/1‑100 (MQ=255)
                                     gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCg                                                               <  1:2320292/100‑1 (MQ=255)
                                      cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCg                                                               >  1:544882/1‑99 (MQ=255)
                                      cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                                              <  1:2939517/100‑1 (MQ=255)
                                        caGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTc                                                            <  2:3472566/100‑1 (MQ=255)
                                          ggCTGTGGTGTTAGGCCTGAAAGTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGACATTTTTCGCTCa                                                           >  2:2063770/1‑99 (MQ=255)
                                            cTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                                        <  2:2810566/100‑1 (MQ=255)
                                                ggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACACCt                                                    >  2:3538869/1‑100 (MQ=255)
                                                ggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACt                                                    >  1:1993671/1‑100 (MQ=255)
                                                ggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACt                                                    >  2:159315/1‑100 (MQ=255)
                                                ggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACt                                                    <  1:2486100/100‑1 (MQ=255)
                                                 gtgtTAGGCCTGAAAATAGTAAAGAAAAGAACCTGCCTCACCAGCCGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATCTTTTTCGCTCAAACAACt                                                    >  1:1044549/1‑99 (MQ=255)
                                                  tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTGCAGATATTTTTCGCTCAAACAACTaa                                                  <  2:2158932/100‑1 (MQ=255)
                                                  tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTaa                                                  >  2:2871950/1‑100 (MQ=255)
                                                       ggCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc                                             >  2:2543854/1‑100 (MQ=255)
                                                        gCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCATGTTTTTTTATTTACTGCGATCTGTGTTCCAGATATTTTTCGATCAAACAACTAATGCGcc                                            <  1:1053256/100‑1 (MQ=255)
                                                         ccTGAAAATAGTAAATAAAAGAACCTGCCTGACAAGCAGGTTTttttatttactattttcaggcctaacaccacagcctgtgcaacatcatgttccaacg                                           <  1:2338101‑M2/100‑58 (MQ=255)
                                                         ccTGAAAATAGTAAATAAAAGAACCTGCCTCCCCAGCAGGTTTttttatttactattttcacgccaaacaccacagcctgtgcaacatcctgttccaa                                             <  1:3056832‑M2/98‑56 (MQ=255)
                                                         ccTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTCttttatttactattttcaggcctaacaccacagcctgtgcaacatcgtgttccaacg                                           <  2:1765065‑M2/100‑58 (MQ=255)
                                                            gAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAAc                                        >  2:2651805/1‑100 (MQ=255)
                                                               aaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAtt                                     <  1:1712747/100‑1 (MQ=255)
                                                                aTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcctgtgcaacatcgtgttccaacgaacgaat                                    <  1:1482234‑M2/100‑65 (MQ=255)
                                                                aTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATCCGCCAAACAttt                                    >  1:2176532/1‑100 (MQ=255)
                                                                  aGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcctgttcaacatcgtgttccaacgaacgaatta                                  <  1:2619938‑M2/100‑67 (MQ=255)
                                                                  aGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcctgtgcaacatcgtgttccaacgaacgaatta                                  <  2:3044381‑M2/100‑67 (MQ=255)
                                                                   gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcctgtgcaacatcgtgttccaacgaacgaattat                                 <  2:3320591‑M2/100‑68 (MQ=255)
                                                                   gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcctgtgcaacatcgtgttccaacgaacgaattat                                 <  2:1702310‑M2/100‑68 (MQ=255)
                                                                   gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCCAACATTTAtt                                 >  1:3324796/1‑100 (MQ=255)
                                                                   gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAtt                                 >  1:353233/1‑100 (MQ=255)
                                                                     aaataaaAGAACCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcctttgcaacatcttgttccaccgaacgaattataa                               <  1:2120632‑M2/100‑70 (MQ=255)
                                                                     aaataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc                               >  1:3315786/1‑100 (MQ=255)
                                                                     aaataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc                               <  2:296986/100‑1 (MQ=255)
                                                                      aataaaAGAACCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcctgtgcaacatcgtgttccaacgaacgaattataac                              <  2:2653554‑M2/100‑71 (MQ=255)
                                                                      aataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcg                              >  2:800931/1‑100 (MQ=255)
                                                                       ataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcgc                             <  2:2474232/100‑1 (MQ=255)
                                                                        taaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg                            >  2:1568922/1‑100 (MQ=255)
                                                                        taaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg                            >  1:2817028/1‑100 (MQ=255)
                                                                        taaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTATGATCTGCTCTCCAGATATTTTTCGCTTAAACAACTAATGCGCCAACAATTTATTgcgc                             >  1:2262711/1‑99 (MQ=255)
                                                                         aaaaGAACCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcctgtgcaacatcgtgttccaacgaacgaattataacc                             <  1:622705‑M2/98‑72 (MQ=255)
                                                                         aaaaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGt                           >  2:3001230/1‑100 (MQ=255)
                                                                         aaaaGAACCTGCCACACCAGCAGGTTTTTTTATTTACTCTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGcgcg                            >  1:2197126/1‑99 (MQ=255)
                                                                          aaaGAACCTGCCTCACCAGCAGGTTTTTTTCTTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa                          >  2:3458836/1‑100 (MQ=255)
                                                                              aaCCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAat                      <  2:517221/100‑1 (MQ=255)
                                                                               aCCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcctgtgcaacatcgtgttccaacgaacgaattataaccacggctgg                     <  2:459981‑M2/100‑80 (MQ=255)
                                                                               aCCTGCCTCACCAGCAGGTTTttttatttactattttcaggcctaacaccacagcctgtgcaacatcgtgttccaacgaacgaattataaccacggctgg                     >  1:3044361‑M2/1‑21 (MQ=255)
                                                                                ccTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAatat                    >  2:2112658/1‑100 (MQ=255)
                                                                                ccTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAat                      >  2:262490/1‑98 (MQ=255)
                                                                                 cTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATc                   >  2:1210954/1‑100 (MQ=255)
                                                                                 cTGCCTCACCAGCAGGTTTTTTTATTTACTATGATTTGCTTTCAAGGTATTTTTCTTTCAAACAACTAATGCGTCAAACATTTATTGCGCGTAAAATATc                   >  1:114950/1‑100 (MQ=255)
                                                                                  tGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCg                  >  1:6414/1‑100 (MQ=255)
                                                                                  tGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCg                  >  2:1972057/1‑100 (MQ=255)
                                                                                   gCCTCACCAGCAGGTTTTTTTATTTACTTTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGGCAAATATCGt                 >  1:1313260/1‑100 (MQ=255)
                                                                                    ccTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGtt                >  2:3270550/1‑100 (MQ=255)
                                                                                      tCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTa              <  1:2762116/100‑1 (MQ=255)
                                                                                        aCCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAtt            <  1:15953/100‑1 (MQ=255)
                                                                                        aCCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAtt            >  1:1033067/1‑100 (MQ=255)
                                                                                        aCCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAtt            <  2:1652452/100‑1 (MQ=255)
                                                                                         ccAGCAGGTTTTTTTATTTACTGTGATCTGCGTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAGATATCGTTTAttt           <  1:3454189/100‑1 (MQ=255)
                                                                                           agcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCa         <  2:846414/100‑1 (MQ=255)
                                                                                           agcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCa         <  1:2642632/100‑1 (MQ=255)
                                                                                           agcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCa         <  1:2112646/100‑1 (MQ=255)
                                                                                            gcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAt        <  1:3176581/100‑1 (MQ=255)
                                                                                            gcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAt        <  2:751349/100‑1 (MQ=255)
                                                                                             cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAtt       <  2:2428026/100‑1 (MQ=255)
                                                                                             cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAtt       <  2:1325345/100‑1 (MQ=255)
                                                                                             cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAtt       <  2:1186606/100‑1 (MQ=255)
                                                                                             cagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATCTCAt        >  1:1321505/1‑99 (MQ=255)
                                                                                             cagGTTTTTGTATTTACTGTGATCTGCTTCCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAtt       <  1:2461567/100‑1 (MQ=255)
                                                                                               ggTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTaa     >  2:722750/1‑100 (MQ=255)
                                                                                                gTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAAt    >  1:1786168/1‑100 (MQ=255)
                                                                                                   tttttATTTACTGTGATCTGCTTTCCAGATATTTTTCGTTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTAAttatta   >  1:291122/1‑98 (MQ=255)
                                                                                                   |                                                                                                  
AGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATAC  >  NC_000913/2204381‑2204578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.