New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3962704 =NA (NA)7 (0.090) 6/166 NT NA noncoding (5/36 nt) REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3962736 = NA (NA)intergenic (+38/+9) rep/gpp DNA helicase and single‑stranded DNA‑dependent ATPase/guanosine pentaphosphatase/exopolyphosphatase

Only 100 of 151 total aligned reads displayed.

GCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTCCTGAGCAATA  >  NC_000913/3962605‑3962802
                                                                                                   |                                                                                                   
gcgcAAAGTAGTCAGCGCCGAAGAACGGAGGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAgg                                                                                                     <  1:1151616/100‑1 (MQ=255)
  gctaacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagcgctatgtccactggccgctggaagtgcattaatgagtaagtg                                                                                                     <  1:593903‑M1/1‑1 (MQ=255)
  gctaacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGc                                                                                                    <  1:2038456‑M1/2‑1 (MQ=255)
  gctaacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGc                                                                                                    <  1:593939‑M1/2‑1 (MQ=255)
  gcAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGcc                                                                                                   >  1:2251266/1‑100 (MQ=255)
  gcAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGcc                                                                                                   >  1:435716/1‑100 (MQ=255)
   ctaacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCg                                                                                                  >  1:1565154‑M1/97‑100 (MQ=255)
     aacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGa                                                                                                >  2:1012241‑M1/95‑100 (MQ=255)
     aaGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGa                                                                                                <  1:203492/100‑1 (MQ=255)
     aaGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGa                                                                                                >  2:1753496/1‑100 (MQ=255)
       gTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGaat                                                                                              <  1:2270599/100‑2 (MQ=255)
        tGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGaaaa                                                                                             >  2:2160545/1‑100 (MQ=255)
        tGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGaaaa                                                                                             <  1:878875/100‑1 (MQ=255)
          gTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGa                                                                                           >  1:2105478/1‑100 (MQ=255)
           tCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGa                                                                                           <  1:93343/99‑1 (MQ=255)
           tCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGAt                                                                                          <  2:410299/100‑1 (MQ=255)
           tCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGAt                                                                                          <  1:1174965/100‑1 (MQ=255)
              gcgcCGAAGAACGGATGCAGAAAGGGTAAAGCCATCTGGCGAATCTGAAAGCGATGATATCGGCAAAACGATGGAAATAATCAAGGCCGGAAAAGATGc                                                                                        <  2:1941970/99‑1 (MQ=255)
              gcgcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCg                                                                                       >  1:1139692/1‑100 (MQ=255)
              gcgcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCg                                                                                       <  1:1906202/100‑1 (MQ=255)
                gcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTc                                                                                     <  2:1334924/100‑1 (MQ=255)
                 ccGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCa                                                                                    >  2:1733585/1‑100 (MQ=255)
                  cGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAg                                                                                   <  2:1056033/100‑1 (MQ=255)
                  cGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAg                                                                                   >  1:514154/1‑100 (MQ=255)
                  cGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAg                                                                                   >  1:1548954/1‑100 (MQ=255)
                   gaagaaCGGATGCAGAAAGGTCAAAGCCATCTGTCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgc                                                                                  <  1:2394836/100‑1 (MQ=255)
                   gaagaaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgc                                                                                  >  1:1884457/1‑100 (MQ=255)
                    aagaaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgca                                                                                 >  1:529137/1‑100 (MQ=255)
                     agaaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGCGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcat                                                                                <  1:1688055/100‑1 (MQ=255)
                       aaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcg                                                                              <  2:353566/100‑1 (MQ=255)
                       aaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcg                                                                              <  2:1225404/100‑1 (MQ=255)
                         cGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAAAGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcgca                                                                            >  2:1688992/1‑100 (MQ=255)
                         aagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGA‑‑‑‑‑TGCGTCAGCATCGCATCCgg                                                                       >  1:2186918‑M1/75‑100 (MQ=255)
                          ggATGCAGAAAGGGCAAAGCCATCCGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcgcat                                                                           >  2:1215678/1‑100 (MQ=255)
                            aTGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATcc                                                                         <  1:1275833/100‑1 (MQ=255)
                             tGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATcc                                                                         >  1:1588946/1‑99 (MQ=255)
                              gCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCgg                                                                       >  2:1111716/1‑100 (MQ=255)
                               ttattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                      >  1:935320‑M1/69‑100 (MQ=255)
                               cAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                      <  1:2345582/100‑1 (MQ=255)
                               cAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                      >  2:1759335/1‑100 (MQ=255)
                               cAGAAAGGGCAAAGCCATCAGGCGAATATGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATAAAGGCCGGAAAAGATGCGTCAGCATAGCATCAgg                                                                       >  2:1584067/1‑99 (MQ=255)
                                aGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCa                                                                     >  2:1344532/1‑100 (MQ=255)
                                 gAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCAc                                                                    >  2:1435038/1‑100 (MQ=255)
                                  ttgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACt                                                                   >  2:1101235‑M1/66‑100 (MQ=255)
                                  ttgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACt                                                                   >  1:1058897‑M1/66‑100 (MQ=255)
                                   aaGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACtt                                                                  >  1:1732699/1‑100 (MQ=255)
                                     gggCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTAc                                                                >  1:429647/1‑100 (MQ=255)
                                      ggCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACt                                                               >  1:1473070/1‑100 (MQ=255)
                                        cAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACt                                                               <  1:765554/98‑1 (MQ=255)
                                        cAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCa                                                             >  1:1769966/1‑100 (MQ=255)
                                         ggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCAt                                                            >  2:832349‑M1/59‑100 (MQ=255)
                                          gaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCa                                                             >  2:1890195‑M1/58‑98 (MQ=255)
                                          aaGCCATCTGGCGAATCTGAAAGTGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCAtt                                                           <  2:1044448/100‑1 (MQ=255)
                                               aTCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGc                                                      <  2:300598/100‑1 (MQ=255)
                                                   ngCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACtt                                                  >  2:2261029/2‑100 (MQ=255)
                                                   ggCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACtt                                                  <  1:2360186/100‑1 (MQ=255)
                                                     cGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTcc                                                <  1:1506009/100‑1 (MQ=255)
                                                     cGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTc                                                 >  2:820710/1‑99 (MQ=255)
                                                     cGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCATCAGCATCGCATCCGGCACTTACTCATTAATGCACTTcc                                                >  2:1468837/1‑100 (MQ=255)
                                                         ccTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAgtg                                            <  1:1628854/99‑3 (MQ=255)
                                                          cTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCgg                                           >  2:1001181/1‑100 (MQ=255)
                                                          cTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCgg                                           <  1:285585/100‑1 (MQ=255)
                                                           tGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGc                                          >  1:343433/1‑100 (MQ=255)
                                                           tGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGAGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGc                                          >  2:604791/1‑100 (MQ=255)
                                                               aGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGt                                      >  2:1626239/1‑100 (MQ=255)
                                                               aGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGt                                      >  2:25524/1‑100 (MQ=255)
                                                                gCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTg                                     <  1:1215689/100‑1 (MQ=255)
                                                                 cGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTgg                                    <  2:1832202/100‑1 (MQ=255)
                                                                 cGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTgg                                    <  1:1052075/100‑1 (MQ=255)
                                                                  gatgatGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGa                                   <  2:218458/100‑1 (MQ=255)
                                                                  gatgatGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGa                                   >  1:688649/1‑100 (MQ=255)
                                                                  gatgatGGAGGCAAAACGAGGGAAATAATCAAGGCCGGAAAATATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCATTTCCAGAGGCCAGTGGa                                   <  2:591215/100‑1 (MQ=38)
                                                                      atgGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATa                               >  2:2065631/1‑100 (MQ=255)
                                                                        ggcggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAgn                             <  1:2261055/100‑2 (MQ=255)
                                                                        ggcggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGc                             >  1:115984/1‑100 (MQ=255)
                                                                          cggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGctc                           >  1:1972238/1‑100 (MQ=255)
                                                                            gcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTg                         <  1:1689012/100‑1 (MQ=255)
                                                                            gcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTg                         >  2:2076196/1‑100 (MQ=255)
                                                                              aaaaCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑cc                      <  1:2315639/100‑1 (MQ=255)
                                                                               aaaCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCa                     <  1:836631/100‑1 (MQ=255)
                                                                                aaCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCAc                    >  2:616305/1‑100 (MQ=255)
                                                                                 aCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACt                   <  1:163697/100‑1 (MQ=255)
                                                                                  cGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTA‑CCACTg                  <  2:478212/100‑1 (MQ=255)
                                                                                   gAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTgg                 >  1:1020761/1‑100 (MQ=255)
                                                                                    aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGc                >  2:355599/1‑100 (MQ=255)
                                                                                    aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGc                <  1:1001192/100‑1 (MQ=255)
                                                                                    aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGG‑CAGAGCTATGTCCACTGGc                <  1:943393/100‑1 (MQ=37)
                                                                                     gggAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGG‑CAGAGCTATGTCCACTGGcc               <  1:1936439/100‑2 (MQ=37)
                                                                                        aaaTAATCAAGTCCGGAAAAGATGCGTCAGCAGCTCATCCGGCATTTACTCATTAATGCCCTTCCAGCCGCCTGTTTACATAGCTCTG‑CCACTGGCtt              <  2:838785/98‑1 (MQ=255)
                                                                                         aataatCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTcc           <  1:838977/100‑1 (MQ=255)
                                                                                           taatCAAGGCCGGAAACGATGCGTCAGCATTGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTCCTg         <  1:706188/100‑1 (MQ=255)
                                                                                             atCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTCCTGAg       >  2:1699944/1‑100 (MQ=255)
                                                                                             atCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTCCTGAg       <  1:22354/100‑1 (MQ=255)
                                                                                             atCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCACTGGACATAGCTCTG‑CCACTGGCTTTCCTggg       <  1:1614465/100‑3 (MQ=255)
                                                                                             agcAAGGCCGGAAAAGATGCGTCAGCCTCTCATTCAGCACTTACTTATTAATGCACTTCCAGCGGCCAGTGGAAATAGCTCTT‑CGACTGGCTTTAGTGAg       <  2:1956893/98‑1 (MQ=255)
                                                                                              tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTCCTGAGc      <  2:1732154/100‑1 (MQ=255)
                                                                                              tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTCCTGAGc      <  1:947844/100‑1 (MQ=255)
                                                                                               cAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTCCTGAGCa     <  2:230733/100‑1 (MQ=255)
                                                                                               cAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTCCTGAGCa     >  1:770439/1‑100 (MQ=255)
                                                                                                aaGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTCCTGAGCaa    >  2:719981/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTG‑CCACTGGCTTTCCTGAGCAATA  >  NC_000913/3962605‑3962802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.