New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3962704 =NA (NA)7 (0.090) 6/166 NT NA noncoding (5/36 nt) REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3962736 = NA (NA)intergenic (+38/+9) rep/gpp DNA helicase and single‑stranded DNA‑dependent ATPase/guanosine pentaphosphatase/exopolyphosphatase

Only 100 of 131 total aligned reads displayed.

AGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGC  >  NC_000913/3962637‑3962832
                                                                                                   |                                                                                                 
aGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCa                                                                                                   >  2:1344532/1‑100 (MQ=255)
 gAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCAc                                                                                                  >  2:1435038/1‑100 (MQ=255)
 attgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGCAc                                                                                                  >  1:957777‑M1/67‑100 (MQ=255)
  ttgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACt                                                                                                 >  2:1101235‑M1/66‑100 (MQ=255)
  ttgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACt                                                                                                 >  1:1058897‑M1/66‑100 (MQ=255)
  aaaGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACt                                                                                                 <  1:758115/100‑1 (MQ=255)
     gggCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTAc                                                                                              >  1:429647/1‑100 (MQ=255)
      ggCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACt                                                                                             <  1:2233752/100‑1 (MQ=255)
      ggCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACt                                                                                             >  1:1473070/1‑100 (MQ=255)
      ggCAAAGCCATCTGGCAAATCTGAAAGCGATGATGGCCGCAAAACGAGCGAAATAATCAAAGACGGAAAAGATGCGTCAGCATCGCATCCGGCACTTAc                                                                                              >  2:1040519/1‑99 (MQ=38)
       gCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTc                                                                                            >  2:1936417/1‑100 (MQ=255)
        cAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACt                                                                                             <  1:765554/98‑1 (MQ=255)
        cAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCa                                                                                           >  1:1769966/1‑100 (MQ=255)
          gaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCa                                                                                           >  2:1890195‑M1/58‑98 (MQ=255)
          aaGCCATCTGGCGAATCTGAAAGTGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCAtt                                                                                         <  2:1044448/100‑1 (MQ=255)
          aaGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCAtt                                                                                         >  2:2347291/1‑100 (MQ=255)
             ccATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAAt                                                                                      <  2:837843/100‑1 (MQ=255)
             ccATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAAt                                                                                      >  1:1307253/1‑100 (MQ=255)
               aTCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGc                                                                                    <  2:300598/100‑1 (MQ=255)
               aTCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGc                                                                                    <  1:1095054/100‑1 (MQ=255)
                 cTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGc                                                                                    <  1:837169/98‑1 (MQ=255)
                   ggCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACtt                                                                                <  1:2360186/100‑1 (MQ=255)
                    gCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTc                                                                               <  1:2081015/100‑1 (MQ=255)
                     cGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTcc                                                                              <  1:1506009/100‑1 (MQ=255)
                     cGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTc                                                                               >  2:820710/1‑99 (MQ=255)
                     cGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCATCAGCATCGCATCCGGCACTTACTCATTAATGCACTTcc                                                                              >  2:1468837/1‑100 (MQ=255)
                        aTCTGAAAGCGATGATGGCGGCAAGACGAGGCAAATAATCAAGGCCGGAAAAGATGCTTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGc                                                                           <  2:1144957/100‑1 (MQ=255)
                        aTCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGc                                                                           >  1:1704198/1‑100 (MQ=255)
                          cTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCgg                                                                         >  2:1001181/1‑100 (MQ=255)
                          cTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCgg                                                                         <  1:285585/100‑1 (MQ=255)
                           tGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGAGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGc                                                                        >  2:604791/1‑100 (MQ=255)
                               aGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGt                                                                    >  2:25524/1‑100 (MQ=255)
                                gCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTg                                                                   <  1:1215689/100‑1 (MQ=255)
                                 cGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTgg                                                                  <  1:1052075/100‑1 (MQ=255)
                                 cGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTgg                                                                  <  1:157031/100‑1 (MQ=255)
                                 cGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTgg                                                                  <  2:1832202/100‑1 (MQ=255)
                                  gatgatGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGa                                                                 <  2:218458/100‑1 (MQ=255)
                                  gatgatGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGa                                                                 >  1:688649/1‑100 (MQ=255)
                                  gatgatGGAGGCAAAACGAGGGAAATAATCAAGGCCGGAAAATATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCATTTCCAGAGGCCAGTGGa                                                                 <  2:591215/100‑1 (MQ=38)
                                      atgGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATa                                                             >  2:2065631/1‑100 (MQ=255)
                                      atgGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATa                                                             >  1:1926343/1‑100 (MQ=255)
                                        ggcggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGc                                                           <  1:229854/100‑1 (MQ=255)
                                          cggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGctc                                                         >  1:1972238/1‑100 (MQ=255)
                                           ggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGctct                                                        >  2:1550107/1‑100 (MQ=255)
                                            gcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTg                                                       <  1:1689012/100‑1 (MQ=255)
                                              aaaaCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGcc                                                    <  1:2315639/100‑1 (MQ=255)
                                              aaaaCAAGGGAAATAATCAAGGCCGCAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGcc                                                    <  2:758155/100‑1 (MQ=255)
                                                aaCGAGGGAAATAATCAAGACCAGAAAAGATGCGTCAGCATCGCATCCGACACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACACAGCTCTGCCAc                                                  >  2:614532/1‑100 (MQ=39)
                                                 aCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACt                                                 <  1:163697/100‑1 (MQ=255)
                                                  cGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTg                                                <  1:255000/100‑1 (MQ=255)
                                                   gAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTgg                                               >  1:1020761/1‑100 (MQ=255)
                                                   gAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTGCCAGCGGCCAGTGGACATAGCTCTGCCACTgg                                               <  1:102360/100‑1 (MQ=255)
                                                    aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGc                                              >  1:564906/1‑100 (MQ=255)
                                                    aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGc                                              >  2:355599/1‑100 (MQ=255)
                                                    aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGc                                              <  1:1001192/100‑1 (MQ=255)
                                                    aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGCAGAGCTATGTCCACTGGc                                              <  1:943393/100‑1 (MQ=37)
                                                     gggAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGCAGAGCTATGTCCACTGGcc                                             <  2:1704363/100‑2 (MQ=37)
                                                     gggAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGCAGAGCTATGTCCACTGGcc                                             <  1:1936439/100‑2 (MQ=37)
                                                       gAAATAATCAAGGCCGGAAAAGATACGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCttt                                           >  2:376878/1‑100 (MQ=255)
                                                        aaaTAATCAAGTCCGGAAAAGATGCGTCAGCAGCTCATCCGGCATTTACTCATTAATGCCCTTCCAGCCGCCTGTTTACATAGCTCTGCCACTGGCtt                                            <  2:838785/98‑1 (MQ=255)
                                                        aaaTAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTc                                          <  1:386624/100‑1 (MQ=255)
                                                         atgagtaagtgccggatgcgatgctgacgcatcttttccggcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTcc                                         >  2:832349‑M2/43‑100 (MQ=255)
                                                         aataatCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTcc                                         <  1:838977/100‑1 (MQ=255)
                                                           taatCAAGGCCGGAAACGATGCGTCAGCATTGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTg                                       <  1:706188/100‑1 (MQ=255)
                                                             atCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCATTGGACATAGCTCTGCCATTGGCTTTCCTgtg                                     <  1:1616740/100‑3 (MQ=255)
                                                             atCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAg                                     <  1:22354/100‑1 (MQ=255)
                                                             atCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAg                                     <  2:1634034/100‑1 (MQ=255)
                                                             atCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAg                                     >  2:1699944/1‑100 (MQ=255)
                                                             atCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCACTGGACATAGCTCTGCCACTGGCTTTCCTggg                                     <  1:1614465/100‑3 (MQ=255)
                                                             agcAAGGCCGGAAAAGATGCGTCAGCCTCTCATTCAGCACTTACTTATTAATGCACTTCCAGCGGCCAGTGGAAATAGCTCTTCGACTGGCTTTAGTGAg                                     <  2:1956893/98‑1 (MQ=255)
                                                              tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGc                                    <  1:678689/100‑1 (MQ=255)
                                                              tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGc                                    <  1:947844/100‑1 (MQ=255)
                                                               cAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCa                                   >  1:770439/1‑100 (MQ=255)
                                                               cAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCa                                   <  2:230733/100‑1 (MQ=255)
                                                                agtgccggatgcgatgctgacgcatcttttccggcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCaa                                  >  1:1058897‑M2/36‑100 (MQ=255)
                                                                agtgccggatgcgatgctgacgcatcttttccggcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCaa                                  >  2:1101235‑M2/36‑100 (MQ=255)
                                                                aaGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCaa                                  >  2:719981/1‑100 (MQ=255)
                                                                  ggCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCaata                                >  1:2251466/1‑100 (MQ=255)
                                                                   gccggatgcgatgctgacgcatcttttccggcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCaataa                               >  1:935320‑M2/33‑100 (MQ=255)
                                                                         ccggatgcgatgctgacgcatccggcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCtt                         >  1:2186918‑M2/27‑100 (MQ=255)
                                                                                cGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAg                  >  1:147235/1‑100 (MQ=255)
                                                                                cGTCAGCATCGCATCCGGCACTTACTCATTAATGCACATCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAg                  >  2:1276932/1‑100 (MQ=255)
                                                                                cGTCAGCATCGCATCCGGCACTTACTCATAAATGCACTTCCTGCGGCCAGTGGACATAGCTCTGCCACTGTCTTTCCTGACCAATAATCTCTTTACCCa                   >  2:1309919/1‑99 (MQ=255)
                                                                                  tCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCg                <  1:1753517/100‑1 (MQ=255)
                                                                                  tCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCg                <  2:574143/100‑1 (MQ=255)
                                                                                    aGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGa              <  2:1769945/100‑1 (MQ=255)
                                                                                      catcgcatcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATg            <  1:2347319/100‑1 (MQ=255)
                                                                                       atcgcatcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGt           >  1:2066329/1‑100 (MQ=255)
                                                                                       atcgcatcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGt           >  2:574541/1‑100 (MQ=255)
                                                                                         cgcatcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTg         <  2:1884435/100‑1 (MQ=255)
                                                                                          gcatcCGGCACTTACTCATTAGTGCACTTCCAGCGGCCAGTGGACATCGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTgg        <  2:516119/100‑1 (MQ=255)
                                                                                          gcatcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTgg        <  1:1765099/100‑1 (MQ=255)
                                                                                           catcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTggg       <  2:2298504/100‑1 (MQ=255)
                                                                                            agccggcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTggg       <  2:2105455‑M2/92‑1 (MQ=255)
                                                                                             tccggcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGtt     >  2:1012241‑M2/7‑100 (MQ=255)
                                                                                               cggcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAg   >  1:1565154‑M2/5‑100 (MQ=255)
                                                                                               cggcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAg   >  1:1213092‑M2/5‑100 (MQ=255)
                                                                                                 gcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGc  <  1:2038456‑M2/97‑1 (MQ=255)
                                                                                                 gcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGc  <  2:2200616‑M2/97‑1 (MQ=255)
                                                                                                 gcACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGc  <  1:593939‑M2/97‑1 (MQ=255)
                                                                                                   |                                                                                                 
AGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGC  >  NC_000913/3962637‑3962832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.