| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4325831 = | NA (NA) | 23 (0.290) | 6/164 | NT | 30.7% | noncoding (30/583 nt) | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences |
| ? | NC_000913 | 4326213 = | 52 (0.650) | noncoding (412/583 nt) | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences | |||||
Only 100 of 207 total aligned reads displayed.
TTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGC > NC_000913/4325732‑4325930 | caggcctacagcttcccgcgccctcggtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatgcgacgcttgcgcgtctta > 2:1713565‑M1/99‑99 (MQ=255) caggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatgcgacgcttgcgcgtcttAt < 1:924514‑M1/2‑1 (MQ=255) caggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatgcgacgcttgcgcgtcttAt > 2:2395488‑M1/99‑100 (MQ=255) aggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatgcgacgcttgcgcgtcttATc < 1:1776646‑M1/3‑1 (MQ=255) aggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccaactgcctgatgcgacgcttgcgcgtcttATc < 2:461383‑M1/3‑1 (MQ=255) aaCGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATc > 2:128251/1‑100 (MQ=255) aaCGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGGTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCAt > 2:1536566/1‑99 (MQ=255) ggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatgcgacgcttgcgcgtcttATCa < 1:1107467‑M1/4‑1 (MQ=255) gcttacaaattcccgcgccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatgcgacgcttgcgcgtcttATCa > 2:1905592‑M1/96‑99 (MQ=255) cGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAg < 1:1460970/100‑1 (MQ=255) ggCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCTCGCGCGTCTTATCAgg < 1:1976562/100‑1 (MQ=255) cctacaaattcccgcaccctccgtaggccggataaggcatttacaccgcatccggcaacagtgccgactgcctgatgggacgcttgcgcgtcttATCa < 2:1234441‑M1/4‑1 (MQ=255) ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatgcgacgcttgcgcgtcttATCAGGc < 1:591679‑M1/7‑1 (MQ=255) ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatgcgacgcttgcgcgtcttATCAGGc < 1:754952‑M1/7‑1 (MQ=255) gatgGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTc < 1:707671/100‑1 (MQ=255) gatgGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTc > 2:542856/1‑100 (MQ=255) atgGTGACCTCGGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTGATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCg < 1:1528048/100‑1 (MQ=255) ggTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGc < 2:2227035/100‑1 (MQ=255) ggTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGc > 2:699362/1‑100 (MQ=255) gTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCa > 1:1955170/1‑100 (MQ=255) tcaCCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCAc < 1:1453594/98‑1 (MQ=255) tGACGTCAGTTAAGGGAAACAAGTCAAGTGTAGTTCGAGAATTATACAGATGTGTGGAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGc < 2:198697/98‑1 (MQ=18) tGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCAc > 2:219008/1‑100 (MQ=255) gcaccatccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcagatcggaagag < 2:1220268‑M1/19‑11 (MQ=255) ccTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGt > 1:1194488/1‑100 (MQ=255) tCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTg < 1:18624/100‑1 (MQ=255) cAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGc > 1:1589818/1‑100 (MQ=255) cAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGc > 2:939433/1‑100 (MQ=255) aGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGcc < 2:1174720/100‑1 (MQ=255) gTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGcc > 2:864425/1‑99 (MQ=255) gTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCg > 2:2335794/1‑100 (MQ=255) gTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCg > 2:1358491/1‑100 (MQ=255) ttAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCgg < 2:1643752/100‑1 (MQ=255) ttAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCgg > 1:809574/1‑100 (MQ=255) ttAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCgg < 2:809565/100‑1 (MQ=255) tAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGa > 2:759820/1‑100 (MQ=255) tAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGAGTCGCATCAGGCAGTCGGCACTGTTGCCgg > 2:2077649/1‑99 (MQ=255) aaGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGAt > 2:2081501/1‑100 (MQ=255) gagaAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATgc > 2:1095549/1‑100 (MQ=255) gaAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATgcgg < 2:1589798/100‑1 (MQ=255) aGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATgcggcg < 2:289707/100‑1 (MQ=255) gCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGt < 2:515143/100‑1 (MQ=255) gCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGt > 2:343202/1‑100 (MQ=255) cAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTaa > 2:1773232/1‑100 (MQ=255) aGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTaaa > 1:296328/1‑100 (MQ=255) ttAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACg < 1:2383174/100‑1 (MQ=255) ttAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACg < 1:2131053/100‑1 (MQ=255) aaGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGcc > 2:1945116/1‑100 (MQ=255) aGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCt > 2:2122915/1‑100 (MQ=255) aGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCt < 1:1247865/100‑1 (MQ=255) aGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCt > 1:1483702/1‑100 (MQ=255) aGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCt > 1:1928281/1‑100 (MQ=255) gtAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTAt > 2:2093578/1‑100 (MQ=255) tAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATc < 1:1397979/100‑1 (MQ=255) aGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATc > 2:2160854/1‑99 (MQ=255) gTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCttgt > 2:1406994/1‑95 (MQ=255) gAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGcc < 1:762084/99‑1 (MQ=255) gAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCt > 1:1997113/1‑100 (MQ=255) aaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc < 2:39354/100‑1 (MQ=255) aaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc > 2:1107457/1‑100 (MQ=255) aaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc < 1:1062152/100‑1 (MQ=255) cAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTCAACGCCTTATCAGGCCTACGGAgg > 2:2273497/1‑97 (MQ=255) gATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCg > 2:2316041/1‑100 (MQ=255) gATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCg > 1:1568204/1‑100 (MQ=255) gagaGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGTGTAAACGCCTTATCCGGCCTACGGAGGGTGCggg < 1:459825/99‑1 (MQ=255) gagGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGGAt > 2:2153015/1‑100 (MQ=255) gagGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAt < 1:2338631/100‑1 (MQ=255) ccgactgcctgatgcgacgcttgcgcgtcttATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGTGCGGGAAt < 1:990183‑M1/69‑1 (MQ=255) cgactgcctgatgcgacgcttgcgcgtcttATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGATGGTGCGGGAAtt < 1:674144‑M1/70‑1 (MQ=255) cgactgcctgatgcgacgctcgcgcgtcttATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAtt < 2:132897‑M1/70‑1 (MQ=255) gttggtcTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAttt < 1:378464/94‑1 (MQ=255) ggcggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAttt > 2:920875/1‑100 (MQ=255) ggcggcCTGATAAGACGCGCGAGCGTCGCATAAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAGCGAGTGCGGGaaat > 1:100500/1‑97 (MQ=14) actgcctgatgcgacgcttgcgcgtcttATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTACACGACTTATCCGGCCTACGGATGGTGCGGGAATTTg < 1:2201802‑M1/72‑1 (MQ=255) ctgcctgatgcgacgcttgcgcgtcttATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTATACGCCTTATCCGGCCTACGGAGGGTGCGGGAAGTTg < 2:2037613‑M1/72‑1 (MQ=255) ctgcctgatgcgacgcttgcgcgtcttATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGt < 2:1452006‑M1/73‑1 (MQ=255) cggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGCATTTGt > 1:1292982/1‑100 (MQ=255) tgcctgatgcgacgcttgcgcgtcttATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTa < 1:349742‑M1/74‑1 (MQ=255) gcctgatgcgacgcttgcgagtcttATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg < 1:1468614‑M1/75‑1 (MQ=255) gcctgatgcgacgctcgcgcgtcttATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg < 1:954254‑M1/75‑1 (MQ=255) ccTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg > 1:1643991/1‑100 (MQ=38) cTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGc > 1:241097/1‑100 (MQ=38) tGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGcc < 2:1815334/100‑1 (MQ=38) tGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGc < 2:1525690/99‑1 (MQ=35) gATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCt < 1:865771/100‑1 (MQ=38) aGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa < 1:2397522/100‑1 (MQ=38) aGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa > 2:2377175/1‑100 (MQ=38) aGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa < 1:1707209/100‑1 (MQ=38) aGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa > 1:214866/1‑100 (MQ=38) gACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGCATTGGTAGGCCTGATa > 2:728945/1‑99 (MQ=255) cgcgAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGagg > 2:1244291/1‑98 (MQ=38) cgcgAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcg > 2:1825741/1‑100 (MQ=38) gCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCaa > 2:1021285/1‑100 (MQ=32) gCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCaa < 1:1414219/100‑1 (MQ=32) gCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCaa < 2:1855567/100‑1 (MQ=33) cGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAg > 1:2223970/1‑100 (MQ=33) tCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCg < 2:241094/100‑1 (MQ=33) cGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGt > 1:1828793/1‑100 (MQ=33) gCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTc > 1:2100057/1‑100 (MQ=33) ATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGc > 2:214863‑M1/1‑100 (MQ=255) | TTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGC > NC_000913/4325732‑4325930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |