New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4450948 =NA (NA)4 (0.050) 3/164 NT NA noncoding (5/85 nt) REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4450978 = NA (NA)noncoding (35/85 nt) REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 127 total aligned reads displayed.

CAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC  >  NC_000913/4450849‑4451047
                                                                                                   |                                                                                                    
ggtgttggtcggtcgtcatggtttcccccggtgtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcg                                                                                                      <  1:2405796‑M1/1‑1 (MQ=255)
ggtgttggtcggtcgtcatggtttcccccggtgtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcg                                                                                                      <  1:1516776‑M1/1‑1 (MQ=255)
cAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAgg                                                                                                      <  2:2115403/100‑1 (MQ=255)
 aaaTCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGc                                                                                                     >  2:1022408/1‑100 (MQ=255)
   gttggtcggtcgtcatggtttcccccggtgtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCg                                                                                                   <  2:2199491‑M1/4‑1 (MQ=255)
   gttggtcggtcgtcatggtttcccccggtgtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCg                                                                                                   >  1:1337187‑M1/97‑100 (MQ=255)
   aTCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGcag                                                                                                   >  1:699949/1‑98 (MQ=255)
    tCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCgg                                                                                                  <  1:1731690/100‑1 (MQ=255)
    tCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCgg                                                                                                  <  1:157688/100‑1 (MQ=255)
     ccACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGa                                                                                                 >  1:1377399/1‑100 (MQ=255)
      cACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAt                                                                                                >  1:2069419/1‑100 (MQ=255)
       aCCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATa                                                                                              <  2:360873/100‑1 (MQ=255)
          cTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAgg                                                                                           <  1:761448/100‑1 (MQ=255)
          cTTTACCTGCCTGATACAGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTCTTGAGAGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATaa                                                                                             >  2:775819/1‑98 (MQ=255)
             tACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGgcgc                                                                                        >  2:72233/1‑100 (MQ=255)
              aCCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCt                                                                                       <  1:2180613/100‑1 (MQ=255)
               cctgcctgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGgcgc                                                                                        >  2:1027154/1‑98 (MQ=255)
               cctgcctgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTc                                                                                      >  1:959836/1‑100 (MQ=255)
               cctgcctgATACCGCAAAAGAAGAAGTAGAGACGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTc                                                                                      <  1:1674980/100‑1 (MQ=255)
                ctgcctgATACCTCAAAATAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTcg                                                                                     <  1:1070672/100‑1 (MQ=255)
                ctgcctgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTcg                                                                                     >  1:65654/1‑100 (MQ=255)
                 tgcctgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTAATGAGGGATGCTATGCCTGATGCTGATTCGTAGGCCGGATAAGGCGCTcgc                                                                                    >  2:198105/1‑100 (MQ=255)
                   cctgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgcgc                                                                                  >  1:255312/1‑100 (MQ=255)
                     tgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCTTAGGCCGGATAAGGCGCTCGcgcc                                                                                 >  1:1812785/1‑99 (MQ=255)
                     tgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGcgccg                                                                                >  1:260662/1‑100 (MQ=255)
                        tACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCAt                                                                             >  1:1673090/1‑100 (MQ=255)
                         aCCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCAt                                                                             >  1:1439089/1‑99 (MQ=255)
                          ccGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATcc                                                                           <  1:1207369/100‑1 (MQ=255)
                          ccGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATcc                                                                           >  1:1294809/1‑100 (MQ=255)
                          ccGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATcc                                                                           >  2:384606/1‑100 (MQ=255)
                           cGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCg                                                                          >  2:1582375/1‑100 (MQ=255)
                            gCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCgg                                                                         >  1:1533016/1‑100 (MQ=255)
                            gCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCg                                                                          <  2:250106/99‑1 (MQ=255)
                            cggtgtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCgg                                                                         >  1:463851‑M1/72‑100 (MQ=255)
                             ggtgtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGc                                                                        >  1:2226627‑M1/71‑100 (MQ=255)
                                 aggagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCTTAGGCCGGATGCGGCGCGAGCGCCTTATCCGGcctac                                                                    <  2:716605/97‑5 (MQ=21)
                                  gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                   >  1:1375827/1‑100 (MQ=255)
                                  gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                   >  2:1344556/1‑100 (MQ=255)
                                  gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                   >  2:578929/1‑100 (MQ=255)
                                  aaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                   >  1:365871‑M1/66‑100 (MQ=255)
                                    agaaTTAGAGAAGAAGAAAAATATGGGGTATCGAGGGTAGCTAGGCGAGATGCCGATGCGTATGCCGGGTGAGGGCGCCGCGCCGCATTCAGGGATgg                                                                   >  2:2370464/1‑98 (MQ=255)
                                     gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGc                                                                >  2:1793846/1‑100 (MQ=255)
                                       aTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCa                                                               <  2:721461/99‑1 (MQ=255)
                                       aTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCAc                                                              <  1:1582395/100‑1 (MQ=255)
                                        ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACt                                                             >  2:1061093/1‑100 (MQ=255)
                                        ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACt                                                             >  1:543467/1‑100 (MQ=255)
                                         tAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTg                                                            <  2:1702141/100‑1 (MQ=255)
                                            agaagaagaAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGaa                                                          >  2:8801/1‑99 (MQ=255)
                                            agaagaagaAAAATATGGGATATTGAGAGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGACGCTCGCGCCGCATCGGGCGATGGTGCACTGa                                                           >  2:102442/1‑98 (MQ=38)
                                             gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGc                                                        <  2:2338701/100‑1 (MQ=255)
                                             gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGc                                                        >  1:2261222/1‑100 (MQ=255)
                                              aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGc                                                        <  1:1074827/99‑1 (MQ=255)
                                               agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                      <  2:187977/100‑1 (MQ=255)
                                               agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                      <  1:938496/100‑1 (MQ=255)
                                               agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                      >  1:181862/1‑100 (MQ=255)
                                               agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGGAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                      >  2:601541/1‑100 (MQ=255)
                                                gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTg                                                     >  2:1782467/1‑100 (MQ=255)
                                                gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTg                                                     >  1:1961686/1‑100 (MQ=255)
                                                gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTg                                                     >  1:394857/1‑100 (MQ=255)
                                                gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTg                                                     >  2:1332596/1‑100 (MQ=255)
                                                   gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                  >  2:986846/1‑100 (MQ=255)
                                                   gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                  >  1:2199517/1‑100 (MQ=255)
                                                     naaaTATGGGGTATTGAGGCTTGCTATGCCTGATGCCGATTCGTAGTCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCg                                                >  2:788669/2‑100 (MQ=255)
                                                     aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCg                                                >  1:775708/1‑100 (MQ=255)
                                                       aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAc                                              <  1:936535/100‑1 (MQ=255)
                                                       aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAc                                              >  2:1342192/1‑100 (MQ=255)
                                                       aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAc                                              >  2:2377296/1‑100 (MQ=255)
                                                         tatGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGc                                            <  1:1965093/100‑1 (MQ=255)
                                                           tGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCtt                                          >  1:1152685/1‑100 (MQ=255)
                                                              ggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc                                       <  1:1022419/100‑1 (MQ=255)
                                                                 aTTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcgcg                                    <  1:571290/100‑1 (MQ=255)
                                                                   tGAGGTTTGCTATGCCTGATGCCGATTCGTAGGCAGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGTCTGATGCAACGCTTACCGCGTc                                  <  2:295750/100‑1 (MQ=37)
                                                                    gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                 >  1:1696014/1‑100 (MQ=255)
                                                                    gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                 <  1:2090616/100‑1 (MQ=255)
                                                                    gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                 <  1:2038697/100‑1 (MQ=255)
                                                                      gggTTGCTAGGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa                               <  1:574792/100‑1 (MQ=255)
                                                                       ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt                              <  2:466124/100‑1 (MQ=255)
                                                                         ttGCTATGCCTGATCCCTATTCGTAGGCCTGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc                             <  2:1378510/99‑1 (MQ=255)
                                                                           gCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg                          >  1:529418/1‑100 (MQ=255)
                                                                                   tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTg                   <  1:1543433/99‑1 (MQ=255)
                                                                                    gATGCTGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACGGAAGCCTGATGCGACGATTACCGCGTCTTATCATGCCTACTggg                 <  2:775596/100‑1 (MQ=255)
                                                                                    gATGCCGATTGGAGGGCAGGATAAGGCTCGCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGTTGCGACGCTTAACGCGTTTTAGCATGCCTACTggg                 <  2:2199137/100‑1 (MQ=21)
                                                                                    gATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg                 >  2:901935/1‑100 (MQ=255)
                                                                                     aTGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa                <  1:1940014/100‑1 (MQ=255)
                                                                                      tGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg               <  1:1271707/100‑1 (MQ=255)
                                                                                       tgctcccagTAGGCCGGATAAGGCGCCCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc              <  1:721116/92‑1 (MQ=25)
                                                                                       gCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc              >  2:601493/1‑100 (MQ=255)
                                                                                        ccGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCa             >  1:207350/1‑100 (MQ=255)
                                                                                        ccGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCa             >  2:531461/1‑100 (MQ=255)
                                                                                            ttCGTAGTCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCt         <  1:841885/100‑1 (MQ=255)
                                                                                            ttCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCt         <  1:976677/100‑1 (MQ=255)
                                                                                              cGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt       <  2:1725375/100‑1 (MQ=255)
                                                                                              cGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt       <  2:385075/100‑1 (MQ=255)
                                                                                               gTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa      >  2:70147/1‑100 (MQ=255)
                                                                                               gTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa      >  1:269223/1‑100 (MQ=255)
                                                                                                tAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGTACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac     <  1:917112/100‑1 (MQ=255)
                                                                                                 aGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca    <  2:775699/100‑1 (MQ=255)
                                                                                                 aGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca    >  2:267461/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac   >  1:1251029/1‑100 (MQ=255)
                                                                                                   GCCGGATAAGGCGCTCGCGCAGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc  <  2:209705‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                    
CAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC  >  NC_000913/4450849‑4451047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.