BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4450948 =	NA (NA)	4 (0.050)	3/164	NT	NA	noncoding (5/85 nt)	REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4450978 =	NA (NA)	4 (0.050)	3/164	NT	NA	noncoding (35/85 nt)	REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 120 total aligned reads displayed.

AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACC  >  NC_000913/4450881‑4451076

aagaagAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGAt                                                                                                  <  2:1377385/100‑1 (MQ=255)

  gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATgg                                                                                                >  2:578929/1‑100 (MQ=255)

  gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATgg                                                                                                >  2:1344556/1‑100 (MQ=255)

  gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATgg                                                                                                >  1:1375827/1‑100 (MQ=255)

  aaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATgg                                                                                                >  1:365871‑M1/66‑100 (MQ=255)

    agaaTTAGAGAAGAAGAAAAATATGGGGTATCGAGGGTAGCTAGGCGAGATGCCGATGCGTATGCCGGGTGAGGGCGC‑CGCGCCGCATTCAGGGATgg                                                                                                >  2:2370464/1‑98 (MQ=255)

       aTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCa                                                                                            <  2:721461/99‑1 (MQ=255)

       aTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCAc                                                                                           <  1:1582395/100‑1 (MQ=255)

        ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACt                                                                                          >  1:543467/1‑100 (MQ=255)

        ttAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACt                                                                                          >  2:1061093/1‑100 (MQ=255)

         tAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTg                                                                                         <  2:1702141/100‑1 (MQ=255)

            agaagaagaAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGaa                                                                                       >  2:8801/1‑99 (MQ=255)

            agaagaagaAAAATATGGGATATTGAGAGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGACGCTCGCGCCGCATCGGGCGATGGTGCACTGa                                                                                        >  2:102442/1‑98 (MQ=38)

             gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGc                                                                                     <  2:2338701/100‑1 (MQ=255)

             gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGc                                                                                     >  1:2261222/1‑100 (MQ=255)

              aagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGc                                                                                     <  1:1074827/99‑1 (MQ=255)

               agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                                                   <  2:187977/100‑1 (MQ=255)

               agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                                                   >  1:181862/1‑100 (MQ=255)

               agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                                                   <  1:938496/100‑1 (MQ=255)

               agaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGGAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCt                                                                                   >  2:601541/1‑100 (MQ=255)

                gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTg                                                                                  >  2:1782467/1‑100 (MQ=255)

                gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTg                                                                                  >  2:1332596/1‑100 (MQ=255)

                gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTg                                                                                  >  1:1961686/1‑100 (MQ=255)

                   gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                                               >  2:986846/1‑100 (MQ=255)

                     naaaTATGGGGTATTGAGGCTTGCTATGCCTGATGCCGATTCGTAGTCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCg                                                                             >  2:788669/2‑100 (MQ=255)

                     aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCg                                                                             >  1:775708/1‑100 (MQ=255)

                     aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCg                                                                             <  1:2018153/100‑1 (MQ=255)

                       aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAc                                                                           >  2:1342192/1‑100 (MQ=255)

                       aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAc                                                                           <  1:936535/100‑1 (MQ=255)

                           tGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCtt                                                                       >  1:1152685/1‑100 (MQ=255)

                              ggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc                                                                    <  1:1022419/100‑1 (MQ=255)

                                   tGAGGTTTGCTATGCCTGATGCCGATTCGTAGGCAGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGTCTGATGCAACGCTTACCGCGTc                                                               <  2:295750/100‑1 (MQ=37)

                                   tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc                                                               >  1:926074/1‑100 (MQ=255)

                                    gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                                              >  1:1696014/1‑100 (MQ=255)

                                    gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                                              <  1:2090616/100‑1 (MQ=255)

                                    gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                                              <  1:2038697/100‑1 (MQ=255)

                                    gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTAGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                                              >  2:3692/1‑100 (MQ=255)

                                      gggTTGCTAGGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa                                                            <  1:574792/100‑1 (MQ=255)

                                       ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt                                                           <  2:466124/100‑1 (MQ=255)

                                        gTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc                                                          <  2:1169315/100‑1 (MQ=255)

                                           gCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg                                                       >  1:529418/1‑100 (MQ=255)

                                                  cTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTg                                                <  1:1557598/100‑1 (MQ=255)

                                                   tGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTg                                                <  1:1543433/99‑1 (MQ=255)

                                                    gATGCTGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACGGAAGCCTGATGCGACGATTACCGCGTCTTATCATGCCTACTggg                                              <  2:775596/100‑1 (MQ=255)

                                                    gATGCCGATTGGAGGGCAGGAT‑AAGGCTCGCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGTTGCGACGCTTAACGCGTTTTAGCATGCCTACTggg                                              <  2:2199137/100‑1 (MQ=21)

                                                    gATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg                                              <  2:246506/100‑1 (MQ=255)

                                                    gATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg                                              >  2:901935/1‑100 (MQ=255)

                                                     aTGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGa                                             <  1:1940014/100‑1 (MQ=255)

                                                      tGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCTTCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg                                              <  2:821871/98‑1 (MQ=255)

                                                      tGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg                                            <  1:1271707/100‑1 (MQ=255)

                                                       tgctcccagTAGGCCGGAT‑AAGGCGCCCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc                                           <  1:721116/92‑1 (MQ=25)

                                                       gCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc                                           >  2:601493/1‑100 (MQ=255)

                                                        ccGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCa                                          >  2:531461/1‑100 (MQ=255)

                                                        ccGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCa                                          >  1:207350/1‑100 (MQ=255)

                                                           aTTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc                                           <  1:2146740/96‑1 (MQ=255)

                                                           aTTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGc                                       <  1:2315289/100‑1 (MQ=255)

                                                            ttCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCt                                      <  1:976677/100‑1 (MQ=255)

                                                              cGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt                                    <  2:1725375/100‑1 (MQ=255)

                                                              cGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt                                    <  2:385075/100‑1 (MQ=255)

                                                               gTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa                                   >  2:70147/1‑100 (MQ=255)

                                                               gTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa                                   >  1:269223/1‑100 (MQ=255)

                                                               ccatcgccggatgcggcgcgagcgccttatccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt                                    >  1:365871‑M2/36‑100 (MQ=255)

                                                                tAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGTACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac                                  <  1:917112/100‑1 (MQ=255)

                                                                 aGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca                                 >  2:267461/1‑100 (MQ=255)

                                                                 aGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTaca                                 <  2:775699/100‑1 (MQ=255)

                                                                  ggCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac                                >  1:1251029/1‑100 (MQ=255)

                                                                  ggCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac                                >  1:471745/1‑100 (MQ=255)

                                                                   GCCGGAT‑AAGGCGCTCGCGCAGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc                               <  2:209705‑M1/100‑1 (MQ=255)

                                                                    gccggatgcggcgcgagcgccttatccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc                               >  1:2226627‑M2/31‑100 (MQ=255)

                                                                     ccggatgcggcgcgagcgccttatccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCg                              >  1:463851‑M2/30‑100 (MQ=255)

                                                                      GGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCggg                            <  2:1037846‑M1/100‑1 (MQ=255)

                                                                      GGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCggg                            <  1:2205486‑M1/100‑1 (MQ=255)

                                                                       GAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCgggg                           >  1:2210277‑M1/1‑100 (MQ=255)

                                                                       GAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCgggg                           >  2:1803374‑M1/1‑100 (MQ=255)

                                                                       GAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCgggg                           >  1:1137224‑M1/1‑100 (MQ=255)

                                                                       GAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCgggg                           >  2:495631‑M1/1‑100 (MQ=255)

                                                                        AT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCggggg                          <  1:421207‑M1/100‑1 (MQ=255)

                                                                            aGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGaaa                       <  2:2069397/100‑1 (MQ=255)

                                                                            aGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGaaa                       >  2:1516759/1‑100 (MQ=255)

                                                                            aGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGaaa                       >  2:1335539/1‑100 (MQ=255)

                                                                             ggCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAAc                      >  1:105419/1‑100 (MQ=255)

                                                                             ggCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAAc                      >  1:275701/1‑100 (MQ=255)

                                                                               cggtCGCGCCGCATCCGGCGATGGTGTACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCa                    <  2:1038413/97‑1 (MQ=255)

                                                                               cgcTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCa                    <  1:803602/100‑1 (MQ=255)

                                                                               cgcTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCa                    >  2:968725/1‑100 (MQ=255)

                                                                               caccatcgccggATGCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCa                    >  2:758733/7‑100 (MQ=38)

                                                                                 cTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCGTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATg                  <  1:1236813/100‑1 (MQ=255)

                                                                                   cgcgCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATga                 <  2:2205460/99‑1 (MQ=255)

                                                                                    gcgcCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgacg               <  1:1588969/100‑1 (MQ=255)

                                                                                      gccgcATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgacgac             >  2:591352/1‑100 (MQ=255)

                                                                                      gccgcATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgacgac             >  2:1848717/1‑100 (MQ=255)

                                                                                      gccgcATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgacgac             >  2:1518603/1‑100 (MQ=255)

                                                                                        cgcATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgaccg           <  2:598452/100‑1 (MQ=255)

                                                                                        cgcATCCGGCGATGGTGCACTGAAGACTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgacc            >  2:795394/1‑99 (MQ=255)

                                                                                            tccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCa       >  1:766748‑M2/7‑100 (MQ=255)

                                                                                             ccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCaa      >  1:1897451‑M2/6‑100 (MQ=255)

                                                                                              cggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAac     <  2:2199491‑M2/96‑1 (MQ=255)

                                                                                              cggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAac     >  1:1337187‑M2/5‑100 (MQ=255)

                                                                                                 cGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACAcc  <  1:2405796‑M2/99‑1 (MQ=255)

                                                                                                 cGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACAcc  <  1:1516776‑M2/99‑1 (MQ=255)

AAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGAT‑AAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGACCAACACC  >  NC_000913/4450881‑4451076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.