BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4628814	NA (NA)	5 (0.060)	4/164	NT	NA	noncoding (120/150 nt)	RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
*	?	NC_000913	= 4628844	NA (NA)	5 (0.060)	4/164	NT	NA	noncoding (150/150 nt)	RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 116 total aligned reads displayed.

GCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCG  >  NC_000913/4628717‑4628913

   gcATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGgccgg                                                                                                >  2:244546‑M1/1‑95 (MQ=255)

    cATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGgccgga                                                                                               >  2:471691‑M1/1‑94 (MQ=255)

     aTCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGgccggat                                                                                              <  1:670561‑M1/100‑8 (MQ=255)

          gCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAgg                                                                                          <  2:2100160/99‑1 (MQ=255)

            aTTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGt                                                                                       <  2:1307704/100‑1 (MQ=255)

            aTTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGt                                                                                       >  2:152668/1‑100 (MQ=255)

             ttCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGtt                                                                                      >  2:2228216/1‑100 (MQ=255)

              tCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTc                                                                                     <  1:1011632/100‑1 (MQ=255)

               cGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTcg                                                                                    >  1:7478/1‑100 (MQ=255)

               cGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTc                                                                                     >  1:742878/1‑99 (MQ=255)

                ggTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTcgc                                                                                   >  2:2307597/1‑100 (MQ=255)

                ggTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTcgc                                                                                   >  1:1885899/1‑100 (MQ=255)

                  tGCTCAATGCTTGATGAGACGCTTACCGCGTTTTATTAGGCTTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGTCGGATAAGGCGTTcgcg                                                                                  <  2:1009098/99‑1 (MQ=38)

                  tGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCgcgc                                                                                 <  1:1074853/100‑1 (MQ=255)

                   gCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGcgcc                                                                                <  1:1692427/100‑1 (MQ=255)

                   gCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGcgcc                                                                                <  2:2018077/100‑1 (MQ=255)

                      cAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCA                                                                             <  2:1624847‑M2/100‑1 (MQ=255)

                       aaTGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCAT                                                                            <  1:242311‑M2/100‑1 (MQ=255)

                         tGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGgccggatgcggcgcgaacgccttatcc                                                                          <  2:1239687‑M1/100‑28 (MQ=255)

                         tGCCTGATGAGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGgccggatgcggcgcgaacgccttatcc                                                                          <  1:1680490‑M1/100‑28 (MQ=255)

                          gCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCG                                                                         >  1:1652748‑M2/1‑100 (MQ=255)

                           ccTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGG                                                                        <  1:1217931‑M2/100‑1 (MQ=255)

                              gATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGgccggatgcggcgcgaacgccttatccggcct                                                                     <  1:1717130‑M1/100‑33 (MQ=255)

                                tGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAttt                                                                   >  2:2071804/1‑100 (MQ=255)

                                 gCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAtttt                                                                  >  2:2042097/1‑100 (MQ=255)

                                  cGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAtttt                                                                  <  1:1954649/99‑1 (MQ=255)

                                     cGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGc                                                              >  1:1597116/1‑100 (MQ=255)

                                     cGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGc                                                              >  2:2197739/1‑100 (MQ=255)

                                     cGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGc                                                              <  2:535656/100‑1 (MQ=255)

                                      gCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCa                                                             <  1:131329/100‑1 (MQ=255)

                                      gCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCa                                                             <  2:602438/100‑1 (MQ=255)

                                       cTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCAt                                                            >  1:1484995/1‑100 (MQ=255)

                                         tACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGgccggatgcggcgcgaacgccttatccggcctacaaaaccagc                                                          <  1:956153‑M1/100‑44 (MQ=255)

                                          aCCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTAc                                                         >  1:1635292/1‑100 (MQ=255)

                                          aCCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTAc                                                         <  2:2169397/100‑1 (MQ=255)

                                           ccGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACt                                                        >  1:1542530/1‑100 (MQ=255)

                                            cgcgTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACtt                                                       >  1:913676/1‑100 (MQ=255)

                                                tCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCa                                                   <  1:375930/100‑1 (MQ=255)

                                                  ttATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCAGCATCCGGCATTTTACGCATTACTTCGCAAt                                                 >  2:973191/1‑100 (MQ=255)

                                                   tATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATa                                                >  1:690412/1‑100 (MQ=255)

                                                    aTCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATAc                                               >  2:1795087/1‑100 (MQ=255)

                                                    aTCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATAc                                               >  2:1881538/1‑100 (MQ=255)

                                                    aTCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATACGGCATTTTACGCATTCCTTCGCAAtcc                                               >  2:1813705/1‑98 (MQ=255)

                                                      cAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGc                                             >  1:2111278/1‑100 (MQ=255)

                                                      cAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGc                                             >  1:1222423/1‑100 (MQ=255)

                                                       aGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCACATCCGGCATTTTACGCATTACTTCGCAATACGCt                                            <  1:1186968/100‑1 (MQ=255)

                                                       aGGCCTACAGTTTTACAACGTATTGAAATTGCTGGATTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACACATTACTTCACAATAc                                               >  1:1425315/1‑97 (MQ=255)

                                                          cttACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCTCATCCGGCATTTTACGCATTACTTCGCAATACGCTTgn                                         <  2:305820/98‑2 (MQ=255)

                                                          ccTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGt                                         >  1:406956/1‑100 (MQ=255)

                                                           cTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTg                                          <  1:1864272/98‑1 (MQ=255)

                                                           cTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTa                                        >  2:1168744/1‑100 (MQ=255)

                                                            tACAGTTTTTCAACGTATTGAAATTGCTGGTTTTGTAGgccggatgcggcgcgaacgccttatccggcctacaaaaccagcaatttcaatacgttgtaa                                        <  1:143624‑M1/99‑62 (MQ=255)

                                                            tACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTAc                                       <  1:1988542/100‑1 (MQ=255)

                                                             aCAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACt                                      >  1:910870/1‑100 (MQ=255)

                                                              cAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACtt                                     <  1:1152847/100‑1 (MQ=255)

                                                              cAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACtt                                     <  2:417825/100‑1 (MQ=255)

                                                                gTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGa                                   <  1:885931/100‑1 (MQ=255)

                                                                 ttttACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGAt                                  <  1:1638632/100‑1 (MQ=255)

                                                                   ttACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCctacaaaaccagcaatttcaatacgttgaaaaactgta                                 <  1:143624‑M2/99‑39 (MQ=255)

                                                                   ttACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATAc                                <  2:1822393/100‑1 (MQ=255)

                                                                   ttACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATAc                                <  2:1822371/100‑1 (MQ=255)

                                                                   ttACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATAc                                <  2:762887/100‑1 (MQ=255)

                                                                   ttACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATAc                                <  1:266864/100‑1 (MQ=255)

                                                                    tACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACg                               <  1:703405/100‑1 (MQ=255)

                                                                       aaCGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCtt                            <  1:2071826/100‑1 (MQ=255)

                                                                       aaCGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCtt                            >  2:193695/1‑100 (MQ=255)

                                                                       aaCGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCtt                            >  2:396986/1‑100 (MQ=255)

                                                                       aaCGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCt                             >  1:513522/1‑99 (MQ=255)

                                                                        aCGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTc                           <  2:2304042/100‑1 (MQ=255)

                                                                        aCGTATTGAAATTGCTGGTTTTGAAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTc                           <  2:2024672/100‑1 (MQ=255)

                                                                         cGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCg                          <  2:1751039/100‑1 (MQ=255)

                                                                           tATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGc                        <  2:819292/100‑1 (MQ=255)

                                                                           tATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGc                        >  2:419399/1‑100 (MQ=255)

                                                                           tATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGc                        <  2:2069316/100‑1 (MQ=255)

                                                                             ttGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTc                      >  1:2015543/1‑100 (MQ=255)

                                                                             ttGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTc                      >  2:2054833/1‑100 (MQ=255)

                                                                                aaaTTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCa                    <  1:2294153/99‑1 (MQ=255)

                                                                                  aTTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAgcg                 <  2:1546811/100‑1 (MQ=255)

                                                                                  aTTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAgcg                 <  1:872908/100‑1 (MQ=255)

                                                                                    tGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGcgcg               <  1:993822/100‑1 (MQ=255)

                                                                                     gCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCctacaaaaccagcaatttcaatacgttgtaaaactgtaggcctgataagacgcggta              <  1:956153‑M2/100‑58 (MQ=255)

                                                                                      cTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTc             >  1:1484393/1‑100 (MQ=255)

                                                                                       tgtttttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTc             <  1:684456/96‑1 (MQ=255)

                                                                                        ggTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTg           >  2:844792/1‑100 (MQ=255)

                                                                                         gTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTgc          >  1:2363977/1‑100 (MQ=255)

                                                                                          ttttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGTCTCCAGCGCGTCTgcg         >  1:934357/1‑100 (MQ=255)

                                                                                          ttttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTgcg         <  1:471694/100‑1 (MQ=255)

                                                                                          ttttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTgcg         >  1:1214549/1‑100 (MQ=255)

                                                                                          ttttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTgcg         >  1:1819544/1‑100 (MQ=255)

                                                                                            ttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGcc       <  2:1865031/100‑1 (MQ=255)

                                                                                              gTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGccta     <  1:2228242/100‑3 (MQ=255)

                                                                                              gTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCa     >  2:360621/1‑100 (MQ=255)

                                                                                               tAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAg    >  2:725056/1‑100 (MQ=255)

                                                                                               tAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAg    <  2:746157/100‑1 (MQ=255)

                                                                                                aGGCCGGATAAGGCGTTCGCGCCGCATCCGGCctacaaaaccagcaatttcaatacgttgtaaaactgtaggcctgataagacgcggtaagcgtcgcatc   <  1:1717130‑M2/100‑69 (MQ=255)

                                                                                                aGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgc   <  2:38011/100‑1 (MQ=255)

                                                                                                aGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgc   >  2:1507612/1‑100 (MQ=255)

                                                                                                 ggCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgcg  <  2:1249514/100‑1 (MQ=255)

                                                                                                 ggCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgcg  <  2:1093731/100‑1 (MQ=255)

                                                                                                 ggCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgcg  <  1:275976/100‑1 (MQ=255)

GCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCG  >  NC_000913/4628717‑4628913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.