New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4628814NA (NA)5 (0.060) 4/164 NT NA noncoding (120/150 nt) RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
?NC_000913 = 4628844 NA (NA)noncoding (150/150 nt) RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP354 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 127 total aligned reads displayed.

TGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGTACTCGGTA  >  NC_000913/4628749‑4628942
                                                                                               |                                                                                                  
tGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAttt                                                                                                >  2:2071804/1‑100 (MQ=255)
 gCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAtttt                                                                                               >  2:2042097/1‑100 (MQ=255)
  cGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAtttt                                                                                               <  1:1954649/99‑1 (MQ=255)
     cGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGc                                                                                           >  2:2197739/1‑100 (MQ=255)
     cGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGc                                                                                           >  1:1597116/1‑100 (MQ=255)
      gCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCa                                                                                          <  1:131329/100‑1 (MQ=255)
      gCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCa                                                                                          <  2:602438/100‑1 (MQ=255)
       cTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCAt                                                                                         >  1:1484995/1‑100 (MQ=255)
          aCCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTAc                                                                                      >  1:1635292/1‑100 (MQ=255)
          aCCGCGTCTTATCAGGCCTACAGTTTTACAACGTATCGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTAc                                                                                      <  1:1687461/100‑1 (MQ=255)
            cgcgTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACt                                                                                     <  2:224997/99‑1 (MQ=255)
               gTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGc                                                                                 <  2:1853101/100‑1 (MQ=255)
                tCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCa                                                                                <  1:375930/100‑1 (MQ=255)
                   tATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATa                                                                             >  1:690412/1‑100 (MQ=255)
                   tATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATa                                                                             >  1:92994/1‑100 (MQ=255)
                    aTCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATAc                                                                            >  2:1881538/1‑100 (MQ=255)
                    aTCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATAc                                                                            >  2:1795087/1‑100 (MQ=255)
                    aTCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATACGGCATTTTACGCATTCCTTCGCAAtcc                                                                            >  2:1813705/1‑98 (MQ=255)
                      cAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGc                                                                          >  1:1222423/1‑100 (MQ=255)
                      cAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGc                                                                          >  1:2111278/1‑100 (MQ=255)
                       aGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCACATCCGGCATTTTACGCATTACTTCGCAATACGCt                                                                         <  1:1186968/100‑1 (MQ=255)
                       aGGCCTACAGTTTTACAACGTATTGAAATTGCTGGATTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACACATTACTTCACAATAc                                                                            >  1:1425315/1‑97 (MQ=255)
                         gCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTg                                                                       >  1:1899281/1‑100 (MQ=255)
                          cttACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCTCATCCGGCATTTTACGCATTACTTCGCAATACGCTTgn                                                                      <  2:305820/98‑2 (MQ=255)
                           cTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTg                                                                       <  1:1864272/98‑1 (MQ=255)
                           cTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTa                                                                     >  2:1168744/1‑100 (MQ=255)
                            tACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTAc                                                                    <  1:1988542/100‑1 (MQ=255)
                             aCAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACt                                                                   >  1:910870/1‑100 (MQ=255)
                              cAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACtt                                                                  <  1:1152847/100‑1 (MQ=255)
                              cAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACtt                                                                  <  2:417825/100‑1 (MQ=255)
                                gTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGa                                                                <  1:885931/100‑1 (MQ=255)
                                gTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGa                                                                >  2:2045354/1‑100 (MQ=255)
                                 ttttACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGAt                                                               >  2:1604617/1‑100 (MQ=255)
                                   ttACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATAc                                                             <  2:1822371/100‑1 (MQ=255)
                                    tACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACg                                                            <  1:703405/100‑1 (MQ=255)
                                       aaCGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCtt                                                         <  1:2071826/100‑1 (MQ=255)
                                       aaCGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCtt                                                         >  1:125251/1‑100 (MQ=255)
                                        aCGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTc                                                        <  2:2304042/100‑1 (MQ=255)
                                        aCGTATTGAAATTGCTGGTTTTGAAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTc                                                        <  2:2024672/100‑1 (MQ=255)
                                           tATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGc                                                     >  2:419399/1‑100 (MQ=255)
                                           tATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGc                                                     <  2:819292/100‑1 (MQ=255)
                                             ttGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTc                                                   >  1:2015543/1‑100 (MQ=255)
                                             ttGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTc                                                   >  2:2054833/1‑100 (MQ=255)
                                                aaaTTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCa                                                 <  1:2294153/99‑1 (MQ=255)
                                                aaaTTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAg                                                <  1:464919/100‑1 (MQ=255)
                                                  aTTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAgcg                                              <  1:872908/100‑1 (MQ=255)
                                                  aTTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAgcg                                              <  2:380254/100‑1 (MQ=255)
                                                  aTTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAgcg                                              <  2:1546811/100‑1 (MQ=255)
                                                    tGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGcgcg                                            <  1:993822/100‑1 (MQ=255)
                                                     gCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCctacaaaaccagcaatttcaatacgttgtaaaactgtaggcctgataagacgcggta                                           <  1:956153‑M2/100‑58 (MQ=255)
                                                      cTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTc                                          >  1:1484393/1‑100 (MQ=255)
                                                      cTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTc                                          <  2:680629/100‑1 (MQ=255)
                                                       tgtttttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTc                                          <  1:684456/96‑1 (MQ=255)
                                                        ggTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTg                                        >  2:844792/1‑100 (MQ=255)
                                                         gTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTgc                                       >  1:2363977/1‑100 (MQ=255)
                                                          ttttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGTCTCCAGCGCGTCTgcg                                      >  1:934357/1‑100 (MQ=255)
                                                          ttttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTgcg                                      >  1:1819544/1‑100 (MQ=255)
                                                          ttttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTgcg                                      <  1:471694/100‑1 (MQ=255)
                                                            ttGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGcc                                    <  2:1865031/100‑1 (MQ=255)
                                                              gTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGccta                                  <  1:2228242/100‑3 (MQ=255)
                                                              gTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCa                                  >  2:360621/1‑100 (MQ=255)
                                                               tAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAg                                 >  2:725056/1‑100 (MQ=255)
                                                               tAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAg                                 <  2:746157/100‑1 (MQ=255)
                                                                aGGCCGGATAAGGCGTTCGCGCCGCATCCGGCctacaaaaccagcaatttcaatacgttgtaaaactgtaggcctgataagacgcggtaagcgtcgcatc                                <  1:1717130‑M2/100‑69 (MQ=255)
                                                                aGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgc                                >  2:1507612/1‑100 (MQ=255)
                                                                aGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgc                                <  2:38011/100‑1 (MQ=255)
                                                                 ggCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgcg                               <  2:1249514/100‑1 (MQ=255)
                                                                 ggCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgcg                               <  2:1093731/100‑1 (MQ=255)
                                                                 ggCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgcg                               <  1:275976/100‑1 (MQ=255)
                                                                    cGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAgcgtg                             <  1:303882/99‑1 (MQ=255)
                                                                     ggATAAGGCGTTCGCGCCGCATCCGGCctacaaaaccagcaatttcaatacgttgtaaaactgtaggcctgataagacgcggtaagcgtctcatcaggca                           <  1:1680490‑M2/100‑74 (MQ=255)
                                                                     ggATAAGGCGTTCGCGCCGCATCCGGCctacaaaaccagcaatttcaatacgttgtaaaactgtaggcctgataagacgcggtaagcgtcgcatcaggca                           <  2:1239687‑M2/100‑74 (MQ=255)
                                                                       aTAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGtt                         <  2:17882/100‑1 (MQ=255)
                                                                         aaGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTc                       >  1:1034322/1‑100 (MQ=255)
                                                                          aGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTGCTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCt                      >  1:364287/1‑100 (MQ=255)
                                                                          aGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTTATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCt                      >  1:1552064/1‑100 (MQ=255)
                                                                          aGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCt                      <  1:422025/100‑1 (MQ=255)
                                                                          aGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCt                      <  2:1110900/100‑1 (MQ=255)
                                                                           ggCGTTCGCGCCGCATGCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTc                       >  2:790691/1‑98 (MQ=255)
                                                                            gCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTTCGTTTCTTg                    >  1:882170/1‑100 (MQ=255)
                                                                            gCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTg                    <  2:637613/100‑1 (MQ=255)
                                                                            gCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTg                    <  1:1677626/100‑1 (MQ=255)
                                                                             cGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGt                   >  1:1928556/1‑100 (MQ=255)
                                                                               ttCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTAc                 <  1:2099343/100‑1 (MQ=255)
                                                                               ttCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTAc                 <  1:1524660/100‑1 (MQ=255)
                                                                                  gcgcCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTActct              >  2:131718/1‑100 (MQ=255)
                                                                                    gccgcATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTc            <  2:727687/100‑1 (MQ=255)
                                                                                      cgcATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGt          <  2:7478/100‑1 (MQ=255)
                                                                                       gcATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGTa         >  1:2102617/1‑100 (MQ=255)
                                                                                       gcATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGTa         <  2:164127/100‑1 (MQ=255)
                                                                                        cATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGTAc        <  2:602962/100‑1 (MQ=255)
                                                                                         aTCCGGCctacaaaaccagcaatttcaatacgttgtaaaactgtaggcctgataagacgcggtaagcgtcgcatcaggcattgagcaccgaatgccggat       <  1:670561‑M2/100‑94 (MQ=255)
                                                                                          tCCGGCctacaaaaccagcaatttcaatacgttgtaaaactgtaggcctgataagacgcggtaagcgtcgcatcaggcattgagcaccgaatgccggatg      >  2:471691‑M2/1‑6 (MQ=255)
                                                                                          tCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGTACt       >  2:2074408/1‑99 (MQ=255)
                                                                                           ccGGCctacaaaaccagcaatttcaatacgttgtaaaactgtaggcctgataagacgcggtaagcgtcgcatcaggcattgagcaccgaatgccggatgc     >  2:244546‑M2/1‑5 (MQ=255)
                                                                                           ccGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGTACTCg     >  2:2162457/1‑100 (MQ=255)
                                                                                           ccGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGTACTCg     <  1:2338614/100‑1 (MQ=255)
                                                                                            cGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGTACTCgg    <  1:1099024/100‑1 (MQ=255)
                                                                                             ggCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGTACTCGGt   <  2:1884391/100‑1 (MQ=255)
                                                                                              gCctacaaaaccagcaatttcaatacgttgtaaaactgtaggcctgataagacgcggtaagcgtcgcatcaggcattgagcaccgaatgccggatgcggc  <  1:1534024‑M2/100‑99 (MQ=255)
                                                                                               |                                                                                                  
TGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACAACGTATTGAAATTGCTGGTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATTTTACGCATTACTTCGCAATACGCTTGTACTTGATACGCTTCGGCTCCAGCGCGTCTGCGCCCAGCGTGCGTTTCTTGTACTCTTCGTACTCGGTA  >  NC_000913/4628749‑4628942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.