| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 190,553 | Δ14 bp | 100% | coding (680‑693/726 nt) | rpsB → | 30S ribosomal subunit protein S2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 190552 | 3 (0.030) | 65 (0.760) | 43/176 | NT | 96.3% | coding (679/726 nt) | rpsB | 30S ribosomal subunit protein S2 |
| ? | NC_000913 | 190567 = | 2 (0.020) | coding (694/726 nt) | rpsB | 30S ribosomal subunit protein S2 | |||||
CGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGC > NC_000913/190455‑190651 | cGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCca < 1:2300918‑M1/100‑3 (MQ=255) ggTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcag < 2:2203951‑M1/100‑4 (MQ=255) tgtTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggc < 1:653879‑M1/100‑6 (MQ=255) tgtTGACTTCATTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCCGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggc < 2:1580280‑M1/100‑6 (MQ=255) gtTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcg < 1:1348991‑M1/100‑7 (MQ=255) gtTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcg < 1:1790243‑M1/100‑7 (MQ=255) ttGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcgg < 1:2007103‑M1/100‑8 (MQ=255) tGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTACTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcgga > 2:860317‑M1/1‑92 (MQ=255) cTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaaga > 2:33268‑M1/1‑89 (MQ=255) cTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaaga < 2:1719496‑M1/100‑12 (MQ=255) cGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaag > 1:2212836‑M1/1‑86 (MQ=255) cGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTcc < 1:1992283/100‑1 (MQ=255) tCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGGTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcg < 2:219732‑M1/100‑20 (MQ=255) cccGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgt > 1:2193383‑M1/1‑80 (MQ=255) cccGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgt > 1:2208302‑M1/1‑80 (MQ=255) cccGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGCGAAGGCCGTTCTCcaggcggaagaaagcttcgt < 1:2021763‑M1/100‑21 (MQ=255) ccGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgta < 2:1938741‑M1/100‑22 (MQ=255) cGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtag < 1:2103174‑M1/100‑23 (MQ=255) acgacgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctg < 2:1710776‑M1/100‑29 (MQ=255) cgacgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctga > 1:936273‑M1/1‑71 (MQ=255) cgacgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctga > 1:2113072‑M1/1‑71 (MQ=255) cgacgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctga > 1:1502461‑M1/1‑71 (MQ=255) cgacgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttagtagaagctga > 1:1895762‑M1/1‑71 (MQ=255) acgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGCAGGCCGTTCTCcaggcggaagaaagcttagtagaagctgatt < 1:1621463‑M1/100‑32 (MQ=255) cgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagta > 2:1227862‑M1/1‑68 (MQ=255) acgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGt < 1:2285334/100‑1 (MQ=255) cAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataag > 2:1902496‑M1/1‑63 (MQ=255) cAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataag > 1:1640899‑M1/1‑63 (MQ=255) ccGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggctt > 2:1121041‑M1/1‑59 (MQ=255) ccGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggctt > 1:925781‑M1/1‑59 (MQ=255) cGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttg < 1:243364‑M1/100‑43 (MQ=255) cGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttg < 1:968352‑M1/100‑43 (MQ=255) tGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgat < 2:1764299‑M1/100‑45 (MQ=255) tGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGGGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttg < 1:1293328‑M1/98‑43 (MQ=255) tGCTGTGACCCTGTACCTGGGCGCTGTTGCTGAAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgat < 2:107697‑M1/100‑45 (MQ=255) gCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgata > 1:435965‑M1/1‑55 (MQ=255) gCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgata < 2:1216399‑M1/100‑46 (MQ=255) gtgACCCTGTACCTGGGCGCTGTTGCTGCAACAGTACGTGAAGTCAGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataact < 2:1999924‑M1/100‑49 (MQ=255) tgACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactc < 1:1427171‑M1/100‑50 (MQ=255) aCCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactccc > 2:2128948‑M1/1‑49 (MQ=255) cccTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccc > 1:1924200‑M1/1‑48 (MQ=255) cccTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaagcttgataactccac > 2:203695‑M1/1‑48 (MQ=255) tACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaa < 1:1312653‑M1/100‑58 (MQ=255) aCCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaat > 1:1478857‑M1/1‑42 (MQ=255) cTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatag > 2:1496826‑M1/1‑40 (MQ=255) cTGGGCGCTGTTGCTGCAACCGTACGTGAAGACCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcacccaaaatag > 1:1221311‑M1/1‑40 (MQ=255) ggCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttc > 1:1729131‑M1/1‑37 (MQ=255) ggCGCTGTTGCTGCAACCGTACGTGAAGACCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttc > 1:2091814‑M1/1‑37 (MQ=255) cTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgag > 2:2118123‑M1/1‑33 (MQ=255) cTGTTGCTGCAACCGTACGTGAAGGACGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagt > 2:1486833‑M1/1‑33 (MQ=255) ttGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgttatcttttccaaaatagttcgagttga < 2:988270‑M1/100‑71 (MQ=255) ttGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgc < 2:964189‑M1/100‑71 (MQ=255) tgctgcAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttg > 2:600425‑M1/1‑29 (MQ=255) ctgcAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATa > 1:349956/1‑100 (MQ=255) tgcAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaa > 1:492031‑M1/1‑26 (MQ=255) tgcAACCATACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaa > 2:519417‑M1/1‑26 (MQ=255) gcAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaa > 2:1659872‑M1/1‑25 (MQ=255) cAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaag > 1:1142304‑M1/1‑24 (MQ=255) aCCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggc > 2:1464413‑M1/1‑22 (MQ=255) cGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcgg < 2:91306‑M1/100‑81 (MQ=255) gTACGTGAAGGCCGTTCGCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcgg < 1:196471‑M1/99‑81 (MQ=255) gTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagc > 2:523619‑M1/1‑15 (MQ=255) tGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagct > 1:49433‑M1/1‑14 (MQ=255) ggCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgag < 2:507301‑M1/100‑91 (MQ=255) ggCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgag > 1:906949‑M1/1‑10 (MQ=255) ggCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgag < 1:337448‑M1/100‑91 (MQ=255) ggCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgag > 1:1716891‑M1/1‑10 (MQ=255) ggCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcga > 1:37419‑M1/1‑10 (MQ=255) gCCGTTCTCcaggcggaagaaattttcgtagaagctgagtaataaggcttgataactcccccaaaattgttcgtgttgcagaaaggcggcaagctcg < 2:2182094‑M1/97‑89 (MQ=255) gCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgaga < 1:1283071‑M1/100‑92 (MQ=255) gCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgaga < 1:1170669‑M1/100‑92 (MQ=255) cGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaat > 2:1599821‑M1/1‑7 (MQ=255) ttCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattc < 2:1757848‑M1/100‑96 (MQ=255) ctccaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattccc > 2:1348441‑M1/1‑3 (MQ=255) tccaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattcccg > 2:533832‑M1/1‑2 (MQ=255) ccaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattcccgg > 1:1270580‑M1/1‑1 (MQ=255) ccaggcggaagaaaacttcgtagaagctgagtaataaggcttgataactcccccaaaataattcgagttgcagaaaggcggcaagctcgagaattcccg > 2:1092010‑M1/1‑1 (MQ=255) | CGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGC > NC_000913/190455‑190651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |