New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2320762	55 (0.640)	10 (0.120)	8/166	NT	16.0%	coding (720/1827 nt)	atoS	sensory histidine kinase in two‑component regulatory system with AtoC
	?	NC_000913	= 2320771	54 (0.670)					coding (729/1827 nt)	atoS	sensory histidine kinase in two‑component regulatory system with AtoC

TCCTTTTCTCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACGCTGCCGAT  >  NC_000913/2320665‑2320861                                                                                                  |                                                                                                    tCCTTTTCTCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCCCTCGACTCTGGCACAAAATATTCCCTCTCGATTACCACAATTGCCCgg                                                                                                   <  1:1503320/100‑1 (MQ=255)   cTTTTCTCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTg                                                                                                 <  1:2401080/100‑1 (MQ=255)    ttttCTCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGTCTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGa                                                                                                <  2:1326401/100‑1 (MQ=255)    ttttCTCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGa                                                                                                <  2:2198698/100‑1 (MQ=255)        ctcCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATg                                                                                            >  2:1543671/1‑100 (MQ=255)        ctcCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATg                                                                                            >  2:533026/1‑100 (MQ=255)         tCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGg                                                                                           >  2:2076125‑M2/1‑99 (MQ=255)          cccGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGgg                                                                                          <  1:906727‑M2/100‑3 (MQ=255)          cccGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCCGGCACAAAATATTCCCACTCGATTACCAAAATTAACCGGTGAAATg                                                                                            >  1:299311/1‑98 (MQ=255)              tCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGgggc                                                                                        >  1:1887266‑M2/1‑94 (MQ=255)                gCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAAt                                                                                    <  1:638327/100‑1 (MQ=255)                 ccTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCcatttcaccgggcaattg                                                                                   <  1:1063288‑M1/100‑19 (MQ=255)                 ccTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAAtc                                                                                   <  1:354433/100‑1 (MQ=255)                  cTGAGCGCCAATATTGATATCATCACCTATGGCCTCTCGACTCTGGCACAAAATATTCCTACTCGATTACCACAATTGCCCcatttcaccgggcaatt                                                                                    <  2:1469812‑M1/98‑18 (MQ=255)                  cTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCcatttcaccgggcaattgt                                                                                  <  2:1646680‑M1/100‑20 (MQ=255)                    gAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCcatttcaccgggcaattgtgg                                                                                <  1:884215‑M1/100‑22 (MQ=255)                     aGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCcatttcaccgggcaattgtggt                                                                               <  1:1037262‑M1/100‑23 (MQ=255)                     aGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCcatttcaccgggcaattgtggt                                                                               <  1:1038852‑M1/100‑23 (MQ=255)                      gcgcCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCcatttcaccgggcaattgtggta                                                                              <  2:978585‑M1/100‑24 (MQ=255)                       cgcCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCcatttcaccgggcaattgtggta                                                                              <  2:1616298‑M1/99‑24 (MQ=255)                       cgcCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAAtcagtcag                                                                             >  1:1876968/1‑100 (MQ=255)                       cgcCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATAGGGCAAAtcagaca                                                                              >  1:150620/1‑99 (MQ=255)                       cgcCAATATTGATATCATCACAGATAGCCTATCGACTATGGCACAAAATATTCCCACTCGATTACCACAATTGCCAGGTGAAATGGGGCAAAtcagacaa                                                                             >  2:453976/1‑99 (MQ=255)                        gcCAATATTGATATCATCACCTATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCTATTACCACAATTGCCCcatttcaccgggcaattgtggtaat                                                                            <  2:424286‑M1/100‑26 (MQ=255)                         ccAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCagag                                                                           >  2:1166454/1‑100 (MQ=255)                            atatTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAgtgt                                                                        <  1:2119540/100‑1 (MQ=255)                             tatTTATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCcatttcaccgggcaattgtggtaatc                                                                           <  1:328486‑M1/96‑27 (MQ=255)                              atTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTta                                                                      <  2:670200/100‑1 (MQ=255)                               ttGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTtaa                                                                     <  2:356849/100‑1 (MQ=255)                                tGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTtaat                                                                    <  1:596928/100‑1 (MQ=255)                                 gATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTtaata                                                                   >  1:1633507/1‑100 (MQ=255)                                 gATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTtaata                                                                   <  1:2094060/100‑1 (MQ=255)                                 gATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTtaata                                                                   <  1:875020/100‑1 (MQ=255)                                      catcaCCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCt                                                               >  1:2201892/1‑99 (MQ=255)                                      catcaCCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTc                                                              >  1:2067804/1‑100 (MQ=255)                                        tcaCCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGc                                                            >  2:590136/1‑100 (MQ=255)                                          aCCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGccc                                                          <  2:1958703/100‑1 (MQ=255)                                             gATTGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGTCAAATCAGTCAGATTGTTAATAACCTCGCCCAgg                                                       <  2:1932076/100‑1 (MQ=255)                                               tGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCa                                                     >  1:631881/1‑100 (MQ=255)                                                ggCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGGGAAATGGGGCCAATCAGCCAGAGCGTTAATAACCTCGCCCAGGCAc                                                    >  1:1735264/1‑100 (MQ=255)                                                    tctcGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCg                                                <  2:1358553/100‑1 (MQ=255)                                                     ctcGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGt                                               >  1:1176179/1‑100 (MQ=255)                                                     ctcGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCACAGGCACTGCGt                                               >  2:1790758/1‑100 (MQ=255)                                                      tcGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTg                                              <  1:1540138/100‑1 (MQ=255)                                                       cGACTCTGGCACAAAAGATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGa                                             <  1:433680/100‑1 (MQ=255)                                                        gACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGaa                                            <  1:742780/100‑1 (MQ=255)                                                            ctGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAAcgc                                        >  1:1836991/1‑100 (MQ=255)                                                              ggCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCgg                                      <  1:1633675/100‑1 (MQ=255)                                                              ggCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCgg                                      <  1:934928/100‑1 (MQ=255)                                                              ggCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCgg                                      <  1:533029/100‑1 (MQ=255)                                                              ggCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCgg                                      <  2:2303189/100‑1 (MQ=255)                                                               gCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCgg                                      <  1:1819915/99‑1 (MQ=255)                                                                  caAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGacac                                  >  2:2075748/1‑100 (MQ=255)                                                                  caAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGacac                                  >  1:704597/1‑100 (MQ=255)                                                                    aaaTATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACtt                                >  2:461990/1‑100 (MQ=255)                                                                        atTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACg                            >  1:381219/1‑100 (MQ=255)                                                                        atTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACg                            <  1:493263/100‑1 (MQ=255)                                                                            ccACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCt                        <  2:2234612/100‑1 (MQ=255)                                                                             cACTCGATTACCACAATTGCCCGTCGAAATGGGGCAAATCAGTCAGAGTATTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTg                       >  2:645477/1‑100 (MQ=255)                                                                             cACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAAAGATCTg                       >  1:1077584/1‑100 (MQ=255)                                                                              aCTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGa                      >  2:1734701/1‑100 (MQ=255)                                                                                tCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGatt                    <  1:1234967/100‑1 (MQ=255)                                                                                 cGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGatta                   >  2:1702389/1‑100 (MQ=255)                                                                                 cGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGatta                   >  2:1943263/1‑100 (MQ=255)                                                                                  gATTACCACAATTGCCCGGTGAAATGgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatataaata                      <  1:328486‑M2/96‑71 (MQ=255)                                                                                   aTTACCACAATTGCCCGGTGAAATGgggcaattgtggtaatagagtgggaatattttgtgccagagtcgagaggccataggtgatgatatcaatattggc                 <  2:424286‑M2/100‑76 (MQ=255)                                                                                    ttACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTg                <  2:150617/100‑1 (MQ=255)                                                                                    ttACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTg                <  2:449211/100‑1 (MQ=255)                                                                                     tACCACAATTGCCCGGTGAAATGgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatatcaatattggcgc               <  2:978585‑M2/100‑78 (MQ=255)                                                                                     tACCACAATTGCCCGGTGAAATGgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatatcaatattggcg                <  2:1616298‑M2/99‑77 (MQ=255)                                                                                      aCCACAATTGCCCGGTGAAATGgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatatcaatattggcgct              <  1:1037262‑M2/100‑79 (MQ=255)                                                                                      aCCACAATTGCCCGGTGAAATGgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatatcaatattggcgct              <  1:1038852‑M2/100‑79 (MQ=255)                                                                                       ccACAATTGCCCGGTGAAATGgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatatcaatattggcgctc             <  1:884215‑M2/100‑80 (MQ=255)                                                                                       ccACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGaaa             <  2:714529/100‑1 (MQ=255)                                                                                       ccACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGaaa             <  1:2186609/100‑1 (MQ=255)                                                                                       ccACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGaaa             >  1:1784666/1‑100 (MQ=255)                                                                                         acaATTGCCCGGTGAAATGgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatatcaatattggcgctcag           <  2:1646680‑M2/100‑82 (MQ=255)                                                                                          caATTGCCCGGTGAAATGgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatatcaatattggcgctcagg          <  1:1063288‑M2/100‑83 (MQ=255)                                                                                          caATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACg          <  1:2180543/100‑1 (MQ=255)                                                                                           aaTTGCCCGGTGAAATGgggcaattgtggtaatcgagtaggaatattttgtgccagagtcgagaggccataggtgatgatatcaatattggcgctcag           <  2:1469812‑M2/98‑82 (MQ=255)                                                                                           aaTTACCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACGc         <  2:1013508/100‑1 (MQ=255)                                                                                            aTTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACGCt        >  2:1872967/1‑100 (MQ=255)                                                                                               gCCCcatttcaccgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatatcaatattggcgctcaggcga       >  1:1887266‑M1/1‑4 (MQ=255)                                                                                               gCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACGCTGcc     >  1:2272426/1‑100 (MQ=255)                                                                                                 cccatttcaccgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatatcaatattggcgctcaggcgacggg   <  1:906727‑M1/100‑99 (MQ=255)                                                                                                 ccGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACGCTGCCg    <  1:448927/99‑1 (MQ=255)                                                                                                  ccatttcaccgggcaattgtggtaatcgagtgggaatattttgtgccagagtcgagaggccatcggtgatgatatcaatattggcgctcaggcgacggga  >  2:2076125‑M1/1‑1 (MQ=255)                                                                                                  |                                                                                                    TCCTTTTCTCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACGCTGCCGAT  >  NC_000913/2320665‑2320861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.