BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4601572 =	95 (1.100)	4 (0.050)	4/162	NT	4.6%	intergenic (‑55/+52)	dnaT/yjjB	DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein
*	?	NC_000913	4601608 =	79 (1.000)	4 (0.050)	4/162	NT	4.6%	intergenic (‑91/+16)	dnaT/yjjB	DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 117 total aligned reads displayed.

GGAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTGT  >  NC_000913/4601509‑4601707

ggAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCGTCCGTGTGc                                                                                                     >  1:1645672/1‑100 (MQ=255)

ggAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGc                                                                                                     >  2:234414/1‑100 (MQ=255)

 gAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCt                                                                                                    <  1:1731359/100‑1 (MQ=255)

   aGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTa                                                                                                  >  2:570488/1‑100 (MQ=255)

     attcctggattatggttgtaccgcaagcgccctcgcgtataaaattgcctcgcttaaaCAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAg                                                                                                >  2:1694365‑M1/59‑100 (MQ=255)

      cATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGc                                                                                               >  1:902347/1‑100 (MQ=255)

      cATACTGTTTCTACAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGc                                                                                               <  1:2140633/100‑1 (MQ=255)

       aTACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCg                                                                                              >  2:1823771/1‑100 (MQ=255)

        tACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCg                                                                                              <  1:1199654/99‑1 (MQ=255)

          cTGTTTTTTAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAgg                                                                                           <  1:1258516/100‑1 (MQ=255)

          cTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAgg                                                                                           <  1:1901679/100‑1 (MQ=255)

            gTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCa                                                                                         >  1:1536014/1‑100 (MQ=255)

              ttCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAt                                                                                       >  2:1402611/1‑100 (MQ=255)

               tctcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAtt                                                                                      >  2:2320057/1‑100 (MQ=255)

               tctcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAtt                                                                                      >  1:2167220/1‑100 (MQ=255)

               tctcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAt                                                                                       <  2:865636/99‑1 (MQ=255)

                 tcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAtttt                                                                                    <  1:2100738/100‑1 (MQ=255)

                 tcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAtttt                                                                                    >  2:26230/1‑100 (MQ=255)

                 tcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAtttt                                                                                    >  1:475898/1‑100 (MQ=255)

                  cAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTta                                                                                   >  1:612480/1‑100 (MQ=255)

                  cAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTta                                                                                   >  1:354081/1‑100 (MQ=255)

                   aaaTATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGTCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTtat                                                                                  >  2:1300032/1‑100 (MQ=255)

                     atatGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATAc                                                                                <  1:955935/100‑1 (MQ=255)

                        tGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATAcgcg                                                                             >  1:1916006/1‑100 (MQ=255)

                        tGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATAcgcg                                                                             >  2:1127836/1‑100 (MQ=255)

                            gcaagcgccctcgcgtataaaattgcctcgcttaagcacacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGa                                                                            >  1:532862‑M2/73‑98 (MQ=255)

                             cGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGgc                                                                        >  1:1563740/1‑100 (MQ=255)

                             cGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGgc                                                                        >  2:1864948/1‑100 (MQ=255)

                               aTGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGgcgc                                                                      <  2:209298/100‑1 (MQ=255)

                                tGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCt                                                                     <  2:1645652/100‑1 (MQ=255)

                                  aaCGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTg                                                                   >  2:2021350/1‑100 (MQ=255)

                                  aaCGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTg                                                                   >  1:2035732/1‑100 (MQ=255)

                                   aCGAGAAGGGAGGTAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTTTCTTATCTGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTg                                                                   >  2:2018229/1‑99 (MQ=255)

                                   aCGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTATCTCTCATCCGTATGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGc                                                                  >  2:2049333/1‑100 (MQ=255)

                                    cgatgatggAGATAACGTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGAGAGGGTGATTGc                                                                  >  2:1033423/8‑99 (MQ=255)

                                     tcgcgtataaaattgcctcgcttaagCAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGc                                                                  >  1:532862‑M1/27‑98 (MQ=255)

                                     gagaAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCgg                                                                <  1:200372/100‑1 (MQ=255)

                                      agaAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGt                                                               <  1:1380937/100‑1 (MQ=255)

                                      agaAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGt                                                               >  2:1675681/1‑100 (MQ=255)

                                      agaAGGGAGATAACTTTTATAGTAACAC‑ACGGAAGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCgg                                                                <  2:1831177/99‑1 (MQ=255)

                                      agaAGGGAGATAACTTATATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGt                                                               >  2:768453/1‑100 (MQ=255)

                                       gaAGGGCGATAATTTTCATA‑TCACGCTACGGAAGAGTGGATGTTGTCTCTCATCCGTGTGCTTAAGTTTGGCAATTTTATACGCGAAGGCGATTGAgg                                                                <  2:2172684/98‑1 (MQ=255)

                                       gaAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTa                                                              <  2:682757/100‑1 (MQ=255)

                                        aaGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTAc                                                             <  2:1747895/100‑1 (MQ=255)

                                         aGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACa                                                            >  2:1550930/1‑100 (MQ=255)

                                          gggAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACaa                                                           >  2:1460715/1‑100 (MQ=255)

                                           ggAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAAc                                                          >  2:2404737/1‑100 (MQ=255)

                                           ggAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAAc                                                          <  1:566877/100‑1 (MQ=255)

                                           ggAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAAc                                                          >  1:1190451/1‑100 (MQ=255)

                                             agaTAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCa                                                        <  2:214408/100‑1 (MQ=255)

                                              gaTAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCAt                                                       >  1:2123177/1‑100 (MQ=255)

                                               aTAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATa                                                      >  1:407233/1‑100 (MQ=255)

                                                   cTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATcc                                                  >  2:1654057/1‑100 (MQ=255)

                                                   cTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATcc                                                  <  1:52368/100‑1 (MQ=255)

                                                   cTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATc                                                   >  1:1888269/1‑99 (MQ=255)

                                                   cTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATACGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAAt                                                    >  2:1660071/1‑98 (MQ=255)

                                                       tataGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGa                                              >  2:30032/1‑100 (MQ=255)

                                                          cttaagcacacggatgagagacagcctcctctcctccgtgtgTTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAAt                                            >  2:1694365‑M2/43‑100 (MQ=255)

                                                          aGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATg                                           <  2:732857/100‑1 (MQ=255)

                                                          aGTAACAC‑ACGGAGGAGAGGAGGCAGTATCTCATCCGTGTGATTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATg                                           >  2:536267/1‑100 (MQ=255)

                                                           gTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATgg                                          >  1:1902296/1‑100 (MQ=255)

                                                            tAACAC‑ACGCAGGAGAGCATGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTGTACGAGAGGGTGCTTGCGGTACTACCAGTATCCAGGAAAgg                                          <  2:897273/99‑1 (MQ=255)

                                                             aaCAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGaa                                        <  2:358055/100‑1 (MQ=255)

                                                             aaCAC‑ACGGAGGAGAGGAGGCCGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGa                                         <  2:494956/99‑1 (MQ=255)

                                                              agcacacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGaa                                        >  1:1310504‑M2/39‑100 (MQ=255)

                                                                cacacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAg                                      >  1:786236‑M2/37‑100 (MQ=255)

                                                                 C‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGAc                                    <  2:2215410‑M1/100‑1 (MQ=255)

                                                                 C‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGAc                                    <  2:20865‑M1/100‑1 (MQ=255)

                                                                    CGGGGGAGAGGAGGCTGTATCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACATCCATAATCCAGGAATGGAAAGAcc                                   >  2:775086‑M1/1‑99 (MQ=255)

                                                                    CGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCg                                  <  2:504464‑M1/100‑1 (MQ=255)

                                                                     GGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGa                                 <  1:185550‑M1/100‑1 (MQ=255)

                                                                      GAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGACAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGAt                                <  1:500998‑M1/100‑1 (MQ=255)

                                                                         gagaggagGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATgg                              <  1:234417/99‑1 (MQ=255)

                                                                          agaggagGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATg                               <  1:425467/97‑1 (MQ=255)

                                                                             ggaggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATaa                          >  1:708470/1‑99 (MQ=255)

                                                                             ggaggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAAc                         >  2:1234739/1‑100 (MQ=255)

                                                                               aggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGc                       >  1:1146585/1‑100 (MQ=255)

                                                                                ggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCa                      >  1:1131772/1‑100 (MQ=255)

                                                                                ggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCa                      >  1:2137835/1‑100 (MQ=255)

                                                                                   tGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACca                   >  1:450812/1‑100 (MQ=255)

                                                                                     tctctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACcaac                 >  1:1386295/1‑100 (MQ=255)

                                                                                      ctctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACACCCATAATCCACGAATGGAAAGACCGATGCATAACGCACcacc                 <  1:1617413/99‑3 (MQ=255)

                                                                                       tctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACcaacaa               >  1:864782/1‑100 (MQ=255)

                                                                                        ctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAAt              >  1:1504702/1‑100 (MQ=255)

                                                                                         tcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATc             >  2:843863/1‑100 (MQ=255)

                                                                                          cATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCg            <  2:1506736/100‑1 (MQ=255)

                                                                                          cATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCg            >  2:252507/1‑100 (MQ=255)

                                                                                          cATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCg            >  1:1022827/1‑100 (MQ=255)

                                                                                             ccgtgtgCTTAAGCGAGGCAATTTTATACGCGCGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATg         >  2:812892‑M2/8‑100 (MQ=255)

                                                                                             ccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATg         >  2:2273030‑M2/8‑100 (MQ=255)

                                                                                             ccgtgtgCTTAAGCGAGGCAATTATATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATg         >  2:494886‑M2/8‑100 (MQ=255)

                                                                                              cgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGa        >  2:2036408‑M2/7‑100 (MQ=255)

                                                                                                tgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAg      <  2:424396‑M2/96‑1 (MQ=255)

                                                                                                   gCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTg   <  1:2171964‑M2/99‑1 (MQ=255)

                                                                                                   gCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCAAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTg   >  2:861130‑M2/2‑100 (MQ=255)

                                                                                                   gCTTAAGCGAGGCAATTTTATACACAAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGAGAACGCACCAACAATCGAAGAAGCTg   >  2:669724‑M2/2‑100 (MQ=255)

                                                                                                   gCTGAAGCGAGGCAATATTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATCGAAAGACCGCTGGATAACGCACCAACAATCGATGAAGc     >  2:228455‑M2/2‑98 (MQ=255)

                                                                                                    cTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACACTCGATGAAGCTGt  >  1:1392858/1‑100 (MQ=255)

                                                                                                    cTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTGt  >  1:1488060/1‑100 (MQ=255)

                                                                                                    cTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTGt  >  2:667641/1‑100 (MQ=255)

GGAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACAC‑ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTGT  >  NC_000913/4601509‑4601707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.