New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 143622848 (0.550)11 (0.140) 8/162 NT 19.7% coding (666/1134 nt) ompN outer membrane pore protein N, non‑specific
?NC_000913 = 1436244 46 (0.580)coding (650/1134 nt) ompN outer membrane pore protein N, non‑specific

CATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGTTGTTGGTGCCTT  >  NC_000913/1436149‑1436343
                                                                                               |                                                                                                   
cATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGccgc                                                                                                 >  1:959276‑M2/1‑96 (MQ=255)
 aTCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGccgca                                                                                                >  2:1177306‑M2/1‑95 (MQ=255)
 aTCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGccgca                                                                                                <  2:854449‑M2/100‑6 (MQ=255)
 aTCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGccgca                                                                                                <  1:2373623‑M2/100‑6 (MQ=255)
 aTCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGccgca                                                                                                >  1:2068292‑M2/1‑95 (MQ=255)
 aTCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGccgca                                                                                                <  1:1394415‑M2/100‑6 (MQ=255)
  tCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGccgc                                                                                                 <  2:1475256‑M2/98‑5 (MQ=255)
    gTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGccgcacca                                                                                             <  2:1641687‑M2/100‑9 (MQ=255)
     ttcgccatgaaaacggtgacggctggggtctttccacaacatatgatttaggcatgggctttagcgcTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAg                                                                                            >  1:1369534‑M1/68‑100 (MQ=255)
     tATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAg                                                                                            <  1:112365/100‑1 (MQ=255)
     tATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAg                                                                                            >  1:1776302/1‑100 (MQ=255)
      tcgccatgaaaacggtgacggctggggtctttccacaacatatgatttaggcatgggctttagcgcTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAgc                                                                                           >  1:729536‑M1/67‑100 (MQ=255)
      aTTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAgc                                                                                           <  1:2191329/100‑1 (MQ=255)
       ttttAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAgcg                                                                                          >  1:154576/1‑100 (MQ=255)
        tttAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAgcgc                                                                                         <  2:432840/100‑1 (MQ=255)
        tttAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAgcgc                                                                                         <  1:2084719/100‑1 (MQ=255)
         ccatgaaaacggtgacggctggggtctttccacaacatatgatttaggcatgggctttagcgcTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCt                                                                                        >  1:2215787‑M1/64‑100 (MQ=255)
         ccatgaaaacggtgacggctggggtctttccacaacatatgatttaggcatgggctttagcgcTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCt                                                                                        >  1:1972865‑M1/64‑100 (MQ=255)
               cagcagTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGcc                                                                                  >  1:1697243/1‑100 (MQ=255)
               cagcagTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGcc                                                                                  <  1:1048990/100‑1 (MQ=255)
                 gcagTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCa                                                                                >  1:1067260/1‑100 (MQ=255)
                    gTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGc                                                                             >  1:1581069/1‑100 (MQ=255)
                     tCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGcc                                                                            <  1:860900/100‑1 (MQ=255)
                       cACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGGAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTa                                                                          >  1:214750/1‑100 (MQ=255)
                           cttCTGCTTTATCCCCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAACGCCCATGCCTAAATc                                                                      <  1:18259/98‑1 (MQ=255)
                             tCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCat                                                                    >  2:2232475/1‑100 (MQ=255)
                             tCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGCTCATTGGTGCGGTCAGAAGCGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCat                                                                    <  2:1305793/100‑1 (MQ=255)
                              cTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCata                                                                   <  2:304485/100‑1 (MQ=255)
                                gCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATAtg                                                                 <  2:613553/100‑1 (MQ=255)
                                  tttATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATAtgtt                                                               >  2:2364397/1‑100 (MQ=255)
                                    tATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATAtgttgt                                                             <  1:1747221/100‑1 (MQ=255)
                                     aTCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCGAAATCATAtgttggg                                                            >  2:1794506/1‑98 (MQ=255)
                                      tCACCACCCGCCGCAGTATGGTTAACCTGGTCATTTGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCAATGCCTAAATCATATGTTGTgg                                                           >  2:1961531/1‑100 (MQ=255)
                                       caccacCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGa                                                          >  2:1301558/1‑100 (MQ=255)
                                       caccacCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGa                                                          >  1:1042030/1‑100 (MQ=255)
                                       caccacCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGa                                                          >  2:2316658/1‑100 (MQ=255)
                                       caccacCCGCCGCAGTATGGTTAACCTGGCCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGa                                                          >  2:1819207/1‑100 (MQ=255)
                                        accaccCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGaa                                                         >  1:2045278/1‑100 (MQ=255)
                                        accaccCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCAATGCCTAAATCATATGTTGTGGaa                                                         >  1:1297416/1‑100 (MQ=255)
                                         ccaccCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGaaa                                                        <  2:1599416/100‑1 (MQ=255)
                                         ccaccCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGaaa                                                        >  1:948399/1‑100 (MQ=255)
                                          caccCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAg                                                       <  2:2137311/100‑1 (MQ=255)
                                           accCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGa                                                      >  1:55189/1‑100 (MQ=255)
                                               gccgcAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGAcccc                                                  <  1:1994452/100‑1 (MQ=255)
                                                 cgcAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAg                                                <  1:1301572/100‑1 (MQ=255)
                                                   cAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGcc                                              >  1:1025252/1‑100 (MQ=255)
                                                         ggTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGccgcaccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggact                                        <  1:1776059‑M2/100‑62 (MQ=255)
                                                            tAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGtt                                     <  1:1200733/100‑1 (MQ=255)
                                                             aaCCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGttt                                    >  2:2294933/1‑100 (MQ=255)
                                                               ccTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTc                                  >  2:100092/1‑100 (MQ=255)
                                                                cTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCa                                 <  1:964832/100‑1 (MQ=255)
                                                                  ggTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCAt                                >  1:138068/1‑99 (MQ=255)
                                                                  ggTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATg                               <  2:1228001/100‑1 (MQ=255)
                                                                   gTCATTGGTGCGGTCATAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATgg                              <  2:1953812/100‑1 (MQ=255)
                                                                   gTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATgg                              >  2:1779971/1‑100 (MQ=255)
                                                                   gTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATgg                              <  1:49456/100‑1 (MQ=255)
                                                                    tCATTGGTGCGGTCAGAAGAGGTGTATGccgcaccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggactgctgggctaaa                             <  1:985178‑M2/100‑73 (MQ=255)
                                                                    tCATTGGTGCGGTCAGAAGAGGTGTATGccgcaccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggactgctgggctaaa                             <  1:892720‑M2/100‑73 (MQ=255)
                                                                    tCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGc                             <  2:1201567/100‑1 (MQ=255)
                                                                    tCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGc                             <  1:1594066/100‑1 (MQ=255)
                                                                     cATTGGTGCGGTCAGAAGAGGTGTATGccgcaccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggactgctgggctaaaa                            <  1:1049990‑M2/100‑74 (MQ=255)
                                                                      aTTGGTGCGGTCAGAAGAGGTGTATGccgcaccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggactgcttggctaaaat                           <  1:989181‑M2/100‑75 (MQ=255)
                                                                        tGGTGCGGTCAGAAGAGGTGTATGccgcaccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggactgctgggctaaaatac                         <  1:1467870‑M2/100‑77 (MQ=255)
                                                                         ggTGCGGTCAGAAGAGGTGTATGccgcaccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggactgctgggctaaaatacg                        <  1:317691‑M2/100‑78 (MQ=255)
                                                                         ggTGCGGTCAGAAGAGGTGTATGccgcaccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggactgctgggctaaaatacg                        <  1:2253684‑M2/100‑78 (MQ=255)
                                                                         GGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACa                        <  1:639443‑M1/100‑1 (MQ=255)
                                                                         GGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACa                        <  1:905784‑M1/100‑1 (MQ=255)
                                                                         GGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACa                        >  1:1841690‑M1/1‑100 (MQ=255)
                                                                          gTGCGGTCAGAAGAGGTGTATGccgccccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggactgctgggctaaaatacga                       <  1:1457474‑M2/100‑79 (MQ=255)
                                                                          gTGCGGTCAGAAGAGGTGTATGccgcaccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggactgctgggctaaaatacga                       <  2:2057861‑M2/100‑79 (MQ=255)
                                                                          GTGCGGTCAGAAGAGGTGTATACCGCACCAGCGCTAAAGCCCATGCATAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACAt                       <  2:981181‑M1/100‑1 (MQ=255)
                                                                            GCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCa                     >  1:1921235‑M1/1‑100 (MQ=255)
                                                                              ggTCAGAAGAGGTGTATGccgcaccaatgaccaggttaaccatactgcggcgggtggtgataaagcagacgcgtggactgctgggctaaaatacgatgct                   <  1:7032‑M2/100‑83 (MQ=255)
                                                                                 cAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTcc                <  2:1154339/100‑1 (MQ=255)
                                                                                  agaagaGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCg               >  2:1497628/1‑100 (MQ=255)
                                                                                   gaagaGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCgt              >  1:2382286/1‑100 (MQ=255)
                                                                                     agagGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCgttg            <  2:1697223/100‑1 (MQ=255)
                                                                                        ggTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGttgttg         >  2:1417587/1‑100 (MQ=255)
                                                                                        ggTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGttgttg         >  1:585365/1‑100 (MQ=255)
                                                                                        ggTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGGTTTCATGGCGAACATCACGTCCGttgttg         >  1:1072993/1‑100 (MQ=255)
                                                                                           gtATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGttgttg         >  2:2201443/1‑97 (MQ=255)
                                                                                           gtATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGTTGTTGGTg      >  2:1468482/1‑100 (MQ=255)
                                                                                           gtATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATAACGTGCGTTGTTGGTg      >  2:1109607/1‑100 (MQ=255)
                                                                                             aTGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGTTGTTGGTGcc    <  1:1714975/100‑1 (MQ=255)
                                                                                             aTGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGTTGTTGGTGcc    <  1:296699/100‑1 (MQ=255)
                                                                                             aTGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGTTGTTGGTGcc    >  2:684928/1‑100 (MQ=255)
                                                                                             aTGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCAAGTCCAttgttgataac    >  1:108676/1‑95 (MQ=255)
                                                                                              tGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGTTGTTGGTGCCt   >  1:2393918/1‑100 (MQ=255)
                                                                                               gCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGTTGTTGGTGCCtt  >  2:463167/1‑100 (MQ=255)
                                                                                               |                                                                                                   
CATCGTATTTTAGCCCAGCAGTCCACGCGTCTGCTTTATCACCACCCGCCGCAGTATGGTTAACCTGGTCATTGGTGCGGTCAGAAGAGGTGTATGCCGCACCAGCGCTAAAGCCCATGCCTAAATCATATGTTGTGGAAAGACCCCAGCCGTCACCGTTTTCATGGCGAACATCACGTCCGTTGTTGGTGCCTT  >  NC_000913/1436149‑1436343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.