New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4086865	96 (0.890)	20 (0.210)	9/154	NT	17.9%	intergenic (+16/‑137)	fdhD/yiiG	formate dehydrogenase formation protein/DUF3829 family lipoprotein
	?	NC_000913	= 4086880	100 (1.070)					intergenic (+31/‑122)	fdhD/yiiG	formate dehydrogenase formation protein/DUF3829 family lipoprotein

TAGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4086755‑4086865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aataagtcctgcAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCAGT  <  NC_000913/4086880‑4086783                                                                                                                                                                                                                   TAGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAA                                                                                                               >  1:2036563/1‑100  AGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAA                                                                                                              <  2:2590466/100‑1  AGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAA                                                                                                              <  1:1984239/100‑1   GAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAAT                                                                                                             <  1:1798355/100‑1   GAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACACATACGCAGCGTTTGAGCAATTAATTAAAAT                                                                                                             >  1:990066/1‑100      cgatCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAG                                                                                                          <  1:1411092/96‑1        GGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTC                                                                                                        <  2:1247393/100‑1         GCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACACATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTC                                                                                                        >  1:2777486/1‑99           TGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTG                                                                                                     >  2:1283561/1‑100            GAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGagatcg                                                                                                    >  2:1411078/1‑94                                GGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGG                                                                                <  1:409546/100‑1                                  TAGGTTTTTGTAATCCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGAC                                                                              <  1:1235404/100‑1                                  TAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGTAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGAC                                                                              <  2:2966442/100‑1                                   tGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACT                                                                             <  1:2704278/99‑1                                   agtTTTTTGTAAACCGGGTCGGTCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACT                                                                             <  1:2077905/97‑1                                   aggacTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTTCTGCAATTTAATATATTTCGCAGGACT                                                                             <  2:2283636/95‑1                                   AGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACT                                                                             <  2:1941081/100‑1                                   AGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACT                                                                             <  2:1350296/100‑1                                    GGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTa                                                                            >  2:2704246/1‑99                                    GGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTT                                                                            <  2:1283585/100‑1                                    GGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTT                                                                            <  1:2665743/100‑1                                      TTTTTGTAAACCGGGTCGGTCAATGGTTTATACTCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTTAT                                                                          <  1:1703628/100‑1                                      TTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTTAT                                                                          <  1:2433372/100‑1                                       TTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTTATT                                                                         <  1:2392311/100‑1                                       TTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGCCCTGCAATTTAATATATTTCGCAGGACTTATT                                                                         <  2:822433/100‑1                                         TTGTAAACCGGGTCGGGCAACGGTTTATACCCATTCGCAGTGTTTGAGTAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTTATTTT                                                                       <  1:2303976/100‑1                                         TTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTTATTTT                                                                       <  1:1895914/100‑1                                         TTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTTATTTT                                                                       <  2:197439/100‑1                                             AAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTTATTTTAATT                                                                   <  1:1283573/100‑1                                             AAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGCAATTTAATATATTTCGCAGGACTTATTTTAATT                                                                   <  1:1316654/100‑1                                                                                                    AATAAGTCCTGCAATTTAATATATTTCGCATGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCTTGACCCGGTTTACAAAA            <  2:382303/100‑1                                                                                                    AATAAGTCCTGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAA            <  1:2555534/100‑1                                                                                                     ATAAGTCCTGCTATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAA           <  1:520910/100‑1                                                                                                     ATAAGTCCTGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAA           <  2:1182309/100‑1                                                                                                     ATAAGTCCTGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAA           <  2:1182238/100‑1                                                                                                      TAAGTCCTGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAAC          <  2:2730785/100‑1                                                                                                         GTCCTGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTA       >  1:2573943/1‑100                                                                                                         GTCCTGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTA       >  2:2815951/1‑100                                                                                                           CCTGCAATTTAATATATTTCGCAAGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAATCCGTTGCCCGACCCGGTTTACAAAAACCTACC     <  2:2440810/100‑1                                                                                                            CTGCACTTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGCTATCAACCGTTGCCCCACCCGGTTTAGAAAAACATAC      >  2:1338589/1‑98                                                                                                            CTGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCA    >  1:112713/1‑100                                                                                                            CTGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCA    >  2:1081290/1‑100                                                                                                            CTGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCA    >  2:2955915/1‑100                                                                                                             TGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCAG   >  2:2354513/1‑100                                                                                                             TGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCAG   <  1:2761469/100‑1                                                                                                             TGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCAG   <  1:828057/100‑1                                                                                                             TGCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTACCCGACCCGGTTTACAAAAACCTACCAG   >  1:2692098/1‑100                                                                                                              GCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCAGT  >  1:1376474/1‑100                                                                                                              GCAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCAG   >  2:2549444/1‑99                                                                                                               CAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCGCGACCCGGTTTACAAAAACCTACCAGT  >  2:2710861/1‑99                                                                                                               CAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCAGT  >  1:2038696/1‑99                                                                                                                                                                                                                   TAGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAATTAAAATAAGTCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4086755‑4086865 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aataagtcctgcAATTTAATATATTTCGCAGGACTTATTTTAATTAATTGCTCAAACGCTGCGGATGGGTATAAACCGTTGCCCGACCCGGTTTACAAAAACCTACCAGT  <  NC_000913/4086880‑4086783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.