| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 50327 = | NA (NA) | 7 (0.070) | 3/164 | NT | NA | noncoding (1/37 nt) | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 50360 = | NA (NA) | noncoding (34/37 nt) | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
TGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/50431‑50327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAG > NC_000913/50360‑50457 TGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGACGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACACGACCGGCGTCGCAT > 2:2576373/1‑100 GTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGACCGGATAAGACGAGACCAGCGACGCAT > 1:633971/1‑99 TCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCC > 1:1484962/1‑100 TCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCC < 2:1319437/100‑1 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG < 1:1469248/100‑1 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 2:822222/1‑100 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG < 2:410936/100‑1 AGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC < 2:871737/100‑1 GCCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCT > 1:1735171/1‑100 CCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTG > 1:558229/1‑100 CCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTG > 1:2652254/1‑100 CCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTG > 1:2462336/1‑100 CCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGACTG > 2:392052/1‑100 CCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACACCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTG > 1:1025857/1‑100 CGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTG > 1:967204/1‑99 ATCCGGGCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAG < 2:2377415/100‑1 TCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATACCGATTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGC > 1:874911/1‑100 CCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCG > 2:2952210/1‑100 CCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCG < 2:491303/100‑1 CGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGC < 1:2856205/100‑1 CGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGC > 1:1736330/1‑100 GGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCA < 2:1768646/100‑1 GCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAG < 2:1829963/100‑1 TGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/50431‑50327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAG > NC_000913/50360‑50457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |