New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 50327 =NA (NA)7 (0.070) 3/164 NT NA noncoding (1/37 nt) REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 50360 = NA (NA)noncoding (34/37 nt) REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 143 total aligned reads displayed.

ACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAG  >  NC_000913/50262‑50457
                                                                                                  |                                                                                                 
aatctcAAAGCAATAGCTGTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCt                                                                                                  >  2:3003211/3‑100 (MQ=38)
 ctctCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCtt                                                                                                 >  1:314344/1‑100 (MQ=255)
   cttacaGCTATTGCTTTGATATTCTGGAGCGGCGGTAATTTTGTATAGATTTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               <  1:2287867/97‑1 (MQ=255)
   ctcACCGCTATTGCGTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGTGCCGGATAAGACGCGACCCGCGTCGCATCCGGccct                                                                                                 <  2:204385/98‑3 (MQ=21)
   ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               >  1:2353681/1‑100 (MQ=255)
   ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               <  1:2685947/100‑1 (MQ=255)
   ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               <  1:2935031/100‑1 (MQ=255)
   ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               >  2:1073361/1‑100 (MQ=255)
   ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGAATGCAACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               >  1:1633891/1‑100 (MQ=255)
    tcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCt                                                                                              <  1:457404/100‑1 (MQ=255)
     cacaGTTATTGTTTTTAGATTGTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCta                                                                                             <  1:2124437/100‑1 (MQ=39)
     cacaGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTccag                                                                                             >  2:2685915/1‑98 (MQ=255)
       caGCTATTGCTTTGAGATTCTGGAGCGGCTGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCtata                                                                                           <  1:102751/100‑1 (MQ=255)
         gCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATc                                                                                         <  1:1264832/100‑1 (MQ=255)
          cTATTGCTTTGAGATTCTGGAGCGTCTGTAATTTTGTATTTTTTTTACGGTTAGTGCTGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCa                                                                                        <  1:792516/100‑1 (MQ=37)
           tATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCa                                                                                        <  2:2441792/99‑1 (MQ=255)
           tATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAg                                                                                       >  1:1657608/1‑100 (MQ=255)
           tATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCCCGTCTTATCCGGCCTTCCTATATCAg                                                                                       <  1:1848213/100‑1 (MQ=255)
           tATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCAGTCGCGTCTTATCCGGCCTTCCTATATCAg                                                                                       >  1:2445262/1‑100 (MQ=255)
               gCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCt                                                                                    >  1:3037106/1‑99 (MQ=255)
                cTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtgt                                                                                  >  2:923875/1‑100 (MQ=255)
                cTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtgt                                                                                  >  1:1833277/1‑100 (MQ=255)
                cTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtg                                                                                   >  2:1165620/1‑99 (MQ=255)
                 tttGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtgtg                                                                                 >  1:2378645/1‑100 (MQ=255)
                 tttGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGAGAAGCAAATCGCGTCTTATCCGGCCTTCCTATATCAGGAtgtg                                                                                 >  1:884653/1‑100 (MQ=255)
                 tttGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTACCGCCGGACGCGACGACGGTCACGTCTTATACGACCTTCCTATATCAGGCtgt                                                                                  >  1:287481/1‑99 (MQ=255)
                  ttGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTgtgt                                                                                >  2:2430418/1‑100 (MQ=255)
                     agaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGGGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTa                                                                             <  2:1942734/100‑1 (MQ=255)
                      gaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTaa                                                                            <  2:524573/100‑1 (MQ=255)
                      gaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACCCCGGTCGCGTCTTATCCCGCCTTCCCATATCAGGCTCTGTTTaa                                                                            >  2:2320566/1‑100 (MQ=255)
                       aTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAg                                                                           <  1:1826322/100‑1 (MQ=255)
                        ttCTGGAGCGGCGGTAATTTTGTATATAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGa                                                                          <  1:879873/100‑1 (MQ=255)
                        tacTGGAGCGGCGTTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAGGa                                                                          >  1:2060697/3‑100 (MQ=255)
                            ggAGCGGCGGTATTTTTGTATAGAATTTACGGCTAGCGCCGGATTCAACGCCAGTCGCGTCGTATCCGGCCTTCCTATATACGGCTGTGTTTAAGAcg                                                                        >  2:1377952/1‑98 (MQ=255)
                                 ggcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgccgccg                                                                  >  2:623523/1‑99 (MQ=255)
                                 ggcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGACCTTCCTATATCAGGCTGTGTTTAAGAcgccgccg                                                                  >  1:439577/1‑99 (MQ=255)
                                  gcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCt                                                                <  1:2089387/100‑1 (MQ=255)
                                   cggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCtt                                                               >  1:868950/1‑100 (MQ=255)
                                      tAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGc                                                            <  1:1418232/100‑1 (MQ=255)
                                      tAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGc                                                            <  1:1073368/100‑1 (MQ=255)
                                        aTTTTGTATAGAATTAACGGCTAGCGCCGGATACGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGccc                                                          <  2:753625/100‑1 (MQ=255)
                                         ttttGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCa                                                         >  2:902789/1‑100 (MQ=255)
                                         ttttGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCa                                                         <  2:2808932/100‑1 (MQ=255)
                                             gTATAGTATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATc                                                     <  2:155443/100‑1 (MQ=255)
                                             gTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATc                                                     >  1:2486835/1‑100 (MQ=255)
                                               ataggttttACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATACCAGGCTGTGTTTAAGACGCCGCCGTTTCGCCCAAATCCt                                                   <  2:372577/94‑1 (MQ=38)
                                               ataGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCt                                                   <  1:2927134/100‑1 (MQ=255)
                                                taGAATTTACGGCTAGCTCCGGATGCGACGCCGGTTGCGTCTTCTACGGCCTTCCTATATCAGGCTGTGTTTAAGACTGCGCTGTTTCGCGCAAATCCtt                                                  <  2:2090068/100‑1 (MQ=255)
                                                 aGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTa                                                 <  1:2505184/100‑1 (MQ=255)
                                                    aTTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATg                                               <  2:2559464/99‑1 (MQ=255)
                                                       tACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCgg                                           <  1:145616/100‑1 (MQ=255)
                                                       tACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCAGCTTCGCCCAAATCCTTATGCCgg                                           >  1:977481/1‑100 (MQ=255)
                                                       tACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCCGCCTTCCTATATCAGGCTGTGATTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCgg                                           >  1:945672/1‑100 (MQ=255)
                                                        aCGGCTAGCGCCGGATGCGACGCCGTTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGt                                          <  1:739534/100‑1 (MQ=255)
                                                          ggCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTc                                        <  2:471493/100‑1 (MQ=255)
                                                            cTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGa                                      >  2:2556922/1‑100 (MQ=255)
                                                               gcgcCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACgg                                   >  1:2251702/1‑100 (MQ=255)
                                                                cgcCGGATGCGACGGCGGTCGCGTCTTATCCGGCCTTCCGAGATCAGGCTGTGTTTAAGACGCCGCGGCTTCGCCCAAATCCTTATGCCGGTTCGACGGc                                  <  2:2921696/100‑1 (MQ=39)
                                                                 gccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCt                                 >  1:1735171‑M2/34‑100 (MQ=255)
                                                                 GCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCt                                 <  2:871737‑M1/100‑1 (MQ=255)
                                                                  ccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTg                                >  1:2652254‑M2/33‑100 (MQ=255)
                                                                  ccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTg                                >  1:2462336‑M2/33‑100 (MQ=255)
                                                                  ccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTg                                >  1:558229‑M2/33‑100 (MQ=255)
                                                                  ccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGACTg                                >  2:392052‑M2/33‑100 (MQ=255)
                                                                  ccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACACCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTg                                >  1:1025857‑M2/33‑100 (MQ=255)
                                                                  CCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTg                                >  2:822222‑M1/1‑100 (MQ=255)
                                                                    ggATGCGACGCAGGTCGCGTCTTATCAGGCCTTCCTATATCAGGAGGTGTTTAAGACGCCGCCGCTTCCCCAAACTCCTTATGCCGGATCGACGGCTAGa                              >  2:2058966/1‑100 (MQ=255)
                                                                    GGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGa                              >  1:1484962‑M1/1‑100 (MQ=255)
                                                                    GGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGa                              <  2:1319437‑M1/100‑1 (MQ=255)
                                                                      ATGCGTCGCTGGTCTCGTCTTATCCGGTCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGAc                             >  1:633971‑M1/1‑99 (MQ=255)
                                                                      ATGCGACGCCGGTCGTGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGTCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACa                            >  2:2576373‑M1/1‑100 (MQ=255)
                                                                        gCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACACCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCGGGAc                             >  2:1093239/1‑97 (MQ=255)
                                                                          gACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAAt                        >  1:1947540/1‑100 (MQ=255)
                                                                          gACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAAt                        >  2:523388/1‑100 (MQ=255)
                                                                          gACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAAt                        <  1:1222498/100‑1 (MQ=255)
                                                                          gACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCAGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAAt                        >  1:151277/1‑100 (MQ=255)
                                                                           aCGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATa                       >  1:593248/1‑100 (MQ=255)
                                                                              ccGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTg                    >  2:1464609/1‑100 (MQ=255)
                                                                              ccGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTg                    >  2:2998542/1‑100 (MQ=255)
                                                                              ccGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCAACAGCTGAACAAAAAACTg                    >  1:2674613/1‑100 (MQ=255)
                                                                               cGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGt                   <  1:645602/100‑1 (MQ=255)
                                                                                ggTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGtt                  <  2:1729587/100‑1 (MQ=255)
                                                                                 gTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGttt                 <  2:1633872/100‑1 (MQ=255)
                                                                                 gTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGttt                 <  2:1826872/100‑1 (MQ=255)
                                                                                 gTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAAGACTGtt                  <  2:693744/99‑1 (MQ=255)
                                                                                  tCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTa                <  2:1444555/100‑1 (MQ=255)
                                                                                    gcgTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATc              >  2:2758813/1‑100 (MQ=255)
                                                                                    gcgTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCACAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTAt               >  2:1304395/1‑99 (MQ=255)
                                                                                        cTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTcc          >  1:1778428/1‑100 (MQ=255)
                                                                                        cTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTcc          >  1:1778732/1‑100 (MQ=255)
                                                                                        cTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGACTGGACAAAATACTGTTTATCTTcc          >  1:1609103/1‑100 (MQ=255)
                                                                                         ttATCCGGCCTTCCTATATCAGGCTGTGTTTAAGTCGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTccc         <  1:1940547/100‑1 (MQ=255)
                                                                                         ttATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCACCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTccc         <  2:1778438/100‑1 (MQ=255)
                                                                                          tATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCa        >  2:1900200/1‑100 (MQ=255)
                                                                                           atccgggCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAg       <  2:2377415‑M2/93‑1 (MQ=255)
                                                                                             ccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAgcg     <  2:491303‑M2/95‑1 (MQ=255)
                                                                                             ccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAgcg     >  2:2952210‑M2/6‑100 (MQ=255)
                                                                                              cggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAgcgc    >  1:1736330‑M2/5‑100 (MQ=255)
                                                                                               ggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCa   <  2:1768646‑M2/97‑1 (MQ=255)
                                                                                                gcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAg  <  2:1829963‑M2/98‑1 (MQ=255)
                                                                                                  |                                                                                                 
ACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAG  >  NC_000913/50262‑50457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.